FFCP PHASE1:Hg19::chr19:18544304..18544347,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:18544304..18544347,+ | |||
|id=chr19:18544304..18544347,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.91e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.78e-19;5!CL:0000128;3.79e-17;7!CL:0000126;3.79e-17;7!CL:0000127;3.79e-17;7!CL:0002319;2.77e-16;25!CL:0000064;6.41e-11;3!CL:0000067;6.41e-11;3!CL:0005012;6.41e-11;3!CL:0002605;6.41e-11;3!CL:0002304;6.41e-11;3!CL:0002603;6.41e-11;3!CL:0000243;4.49e-09;15!CL:0000125;4.49e-09;15!CL:0000650;1.74e-08;2!CL:1000500;1.74e-08;2!CL:1000618;1.74e-08;2!CL:1001318;1.74e-08;2!CL:0002173;1.74e-08;2!CL:0000095;5.17e-08;17!CL:0000047;6.07e-08;2!CL:0002367;1.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.05e-19,5;CL:0000128,1.85e-17,7;CL:0000126,1.85e-17,7;CL:0000127,1.85e-17,7;CL:0002453,1.85e-17,7;CL:0002319,1.91e-16,25;CL:0000133,1.36e-14,59;CL:0000047,2.39e-11,8;CL:0000064,2.62e-11,3;CL:0000067,2.62e-11,3;CL:0005012,2.62e-11,3;CL:0002304,2.62e-11,3;CL:0002605,2.91e-11,3;CL:0000221,2.98e-11,72;CL:0002603,6.03e-11,3;CL:0000243,3.34e-09,15;CL:0000125,3.34e-09,15;CL:0000030,3.34e-09,15;CL:0000339,3.34e-09,15;CL:0000650,1.99e-08,2;CL:1000500,1.99e-08,2;CL:1000618,1.99e-08,2;CL:1001318,1.99e-08,2;CL:0002173,1.99e-08,2;CL:0000095,3.99e-08,17;CL:0000123,3.99e-08,17;CL:0002367,2.97e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000339;4.49e-09;15!CL:0000133;3.54e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.59e-10!86;UBERON:0001017!9.09e-09!82;UBERON:0000073!1.01e-08!94;UBERON:0001016!1.01e-08!94;UBERON:0003056!1.12e-08!61;UBERON:0003075!1.57e-08!86;UBERON:0007284!1.57e-08!86;UBERON:0002346!4.66e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002203;5.47e-14;6!UBERON:0001768;5.47e-14;6!UBERON:0002200;5.47e-14;6!UBERON:0001778;6.41e-11;3!UBERON:0001775;6.41e-11;3!UBERON:0003567;1.74e-08;2!UBERON:0003838;1.74e-08;2!UBERON:0003586;1.74e-08;2!UBERON:0005169;1.74e-08;2!UBERON:0002321;1.74e-08;2!UBERON:0005215;1.74e-08;2!UBERON:0002303;1.74e-08;2!UBERON:0002319;1.74e-08;2!UBERON:0000488;2.70e-08;4!UBERON:0005969;1.28e-07;2!UBERON:0003956;1.28e-07;2!UBERON:0006876;1.71e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002203,5.37e-14,6;UBERON:0001768,5.37e-14,6;UBERON:0002200,5.37e-14,6;UBERON:0001778,2.62e-11,3;UBERON:0001775,2.62e-11,3;UBERON:0000488,1.39e-08,4;UBERON:0003567,1.99e-08,2;UBERON:0003838,1.99e-08,2;UBERON:0003586,1.99e-08,2;UBERON:0005169,1.99e-08,2;UBERON:0002321,1.99e-08,2;UBERON:0005215,1.99e-08,2;UBERON:0002303,1.99e-08,2;UBERON:0002319,1.99e-08,2;UBERON:0001017,4.33e-08,81;UBERON:0006876,1.70e-07,11;UBERON:0005969,2.97e-07,2;UBERON:0003956,2.97e-07,2;UBERON:0001016,6.21e-07,89;UBERON:0003075,9.33e-07,82;UBERON:0007284,9.33e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0.791300934685361,0.247532705920093,0.331397375727916,0,0,0,0,2.95490539384291,1.02000345622126,1.88072832886853,2.57612388417951,1.91624195102038,1.38096903554283,0.458480434487708,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.154934401160603,0,1.17440175733939,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,0.661044872784862,0,0,0,0,1.32171328579026,3.92355994087075,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,1.79616152611729,2.21729397462564,1.58102614247627,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0.44905874525234,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.612975591598039,0,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,6.22065901260936,4.77107165957347,4.06678800043314,3.62813692553797,4.54177531576131,6.93456982244077,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,2.8810180793198,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.811512834825538,0.70445216541493,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0.57191197463259,6.51145926469732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54094624222463,1.30139853857622,0,0.670065061337395,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,0.686286847621712,0,0,0.106727557803444,0,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.229628896329213,0.182091168006717,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,1.51141141271498,0,2.16757150035082,4.51520796469368,0.254876273045038,0,1.11937377361089,0,0,0,0.328014645699706,3.90454073597164,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0.767693373934002,0,0,0,0.719489830333259,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0.707027159768564,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,1.14729081763241,0.491245205065606,0.35667105148125,0.354761064070598,0,0,1.13841952129715,1.04980416073495,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,0,0,1.48642540100575,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0.140669416410513,0,0,3.1668811219199,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.0927680981618513,3.99227596002388,0,0.349839999984783,0,0.227586896570999,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0,0,0.10893846351899,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0.522355239482415,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,1.25990255782507,0,0,0.372757606696298,0,0,0,0,3.17845648891671,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,1.20930250476107,0,0,0,0,0,0,0,0,0,4.82259445395058,4.53880140770872,3.32352270423348,0,0,0.0607495566580247,0,0.236417121897595,1.15400093896996,0,0,0.383830394638891,0,0,0,0,0,0.326587360109409,0,0,0,1.13312091520126,0,1.32506888912221,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0,2.14441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.279759015438889,0.622077260032973,0.383683113910955,0,0.157265941855896,0,0,0,0.123935764259002,0,0,1.1829261750188,0,0.352675943690684,0,0.256916900385838,0,0,0,1.51243017733031,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,1.79024599904647,1.0529445968896,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,1.07140367175657,0,1.21393120847326,0.455324382702595,0,0.230467975111559,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0.628462359664008,0,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| |||
|short_description=p@chr19:18544304..18544347,+ | |||
}} |
Revision as of 22:12, 20 January 2014
Short description: | p@chr19:18544304..18544347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18544304..18544347, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.05e-19 | 5 |
oligodendrocyte | 1.85e-17 | 7 |
macroglial cell | 1.85e-17 | 7 |
astrocyte | 1.85e-17 | 7 |
oligodendrocyte precursor cell | 1.85e-17 | 7 |
neural cell | 1.91e-16 | 25 |
neurectodermal cell | 1.36e-14 | 59 |
neuronal stem cell | 2.39e-11 | 8 |
ciliated cell | 2.62e-11 | 3 |
ciliated epithelial cell | 2.62e-11 | 3 |
multi-ciliated epithelial cell | 2.62e-11 | 3 |
non-pigmented ciliary epithelial cell | 2.62e-11 | 3 |
astrocyte of the cerebral cortex | 2.91e-11 | 3 |
ectodermal cell | 2.98e-11 | 72 |
astrocyte of the cerebellum | 6.03e-11 | 3 |
glial cell (sensu Vertebrata) | 3.34e-09 | 15 |
glial cell | 3.34e-09 | 15 |
glioblast | 3.34e-09 | 15 |
glioblast (sensu Vertebrata) | 3.34e-09 | 15 |
mesangial cell | 1.99e-08 | 2 |
kidney interstitial cell | 1.99e-08 | 2 |
juxtaglomerular complex cell | 1.99e-08 | 2 |
renal interstitial pericyte | 1.99e-08 | 2 |
extraglomerular mesangial cell | 1.99e-08 | 2 |
neuron associated cell | 3.99e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 3.99e-08 | 17 |
trabecular meshwork cell | 2.97e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vasculature of eye | 5.37e-14 | 6 |
uvea | 5.37e-14 | 6 |
vasculature of head | 5.37e-14 | 6 |
ciliary epithelium | 2.62e-11 | 3 |
ciliary body | 2.62e-11 | 3 |
atypical epithelium | 1.39e-08 | 4 |
abdomen connective tissue | 1.99e-08 | 2 |
abdominal segment connective tissue | 1.99e-08 | 2 |
trunk connective tissue | 1.99e-08 | 2 |
interstitial tissue | 1.99e-08 | 2 |
extraglomerular mesangium | 1.99e-08 | 2 |
kidney interstitium | 1.99e-08 | 2 |
juxtaglomerular apparatus | 1.99e-08 | 2 |
mesangium | 1.99e-08 | 2 |
central nervous system | 4.33e-08 | 81 |
vasculature of organ | 1.70e-07 | 11 |
reticulum trabeculare | 2.97e-07 | 2 |
aqueous drainage system | 2.97e-07 | 2 |
nervous system | 6.21e-07 | 89 |
neural plate | 9.33e-07 | 82 |
presumptive neural plate | 9.33e-07 | 82 |