FFCP PHASE1:Hg19::chr19:35646149..35646177,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4029 | |||
|TSSclassifier=weak | |||
|UniProt=Q96DB9 | |||
|association_with_transcript=473bp_to_ENST00000342879_5end | |||
|coexpression_cluster_id=C2349 | |||
|description=CAGE_peak_5_at_FXYD5_5end | |||
|id=chr19:35646149..35646177,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.64e-23!42;CL:0000003!5.41e-21!722;CL:0000860!5.49e-21!45;CL:0000548!8.96e-20!679;CL:0000004!8.96e-20!679;CL:0000255!8.96e-20!679;CL:0000144!1.83e-19!625;CL:0000012!3.93e-19!682;CL:0000048!3.01e-17!430;CL:0000034!5.97e-17!444;CL:0000839!6.50e-17!70;CL:0000723!6.70e-17!436;CL:0000557!3.24e-16!71;CL:0000766!5.48e-16!76;CL:0002194!7.52e-16!63;CL:0000576!7.52e-16!63;CL:0000040!7.52e-16!63;CL:0000559!7.52e-16!63;CL:0002371!1.33e-15!591;CL:0002009!5.51e-15!65;CL:0000763!7.17e-14!112;CL:0000049!7.17e-14!112;CL:0000134!1.87e-11!358;CL:0000063!3.95e-11!578;CL:0002320!4.23e-11!365;CL:0000359!2.72e-09!32;CL:0000192!1.23e-08!42;CL:0000514!1.23e-08!42;CL:0000187!1.24e-07!54;CL:0000219!1.90e-07!390;CL:0000680!7.20e-07!57;CL:0000056!7.20e-07!57;CL:0000355!7.20e-07!57;CL:0000183!7.37e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.29e-24;33!CL:0002057;8.29e-24;33!CL:0000473;1.63e-20;39!CL:0000234;1.63e-20;39!CL:0000576;1.23e-15;48!CL:0000766;1.84e-13;69!CL:0000763;5.05e-08;100!CL:0000359;1.55e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.55e-31,48;CL:0000234,5.55e-31,48;CL:0000860,9.44e-31,42;CL:0002057,9.44e-31,42;CL:0000766,8.86e-24,72;CL:0000839,1.51e-23,66;CL:0000557,6.58e-23,67;CL:0002194,5.77e-22,59;CL:0000576,5.77e-22,59;CL:0000040,5.77e-22,59;CL:0000559,5.77e-22,59;CL:0000763,1.10e-21,108;CL:0000049,1.10e-21,108;CL:0002009,1.12e-20,61;CL:0000048,1.04e-12,427;CL:0000723,2.29e-12,433;CL:0000034,5.96e-12,441;CL:0000134,5.47e-10,354;CL:0002032,7.40e-10,161;CL:0000837,7.40e-10,161;CL:0002320,2.12e-09,361;CL:0000988,9.98e-09,177;CL:0000037,1.29e-08,168;CL:0000359,5.10e-08,32;CL:0002031,5.53e-08,120;CL:0000219,5.35e-07,386;CL:0000738,8.70e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-22;42!CL:0000049;1.10e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.94e-23!216;UBERON:0002390!3.47e-16!102;UBERON:0003061!3.47e-16!102;UBERON:0002193!5.18e-15!112;UBERON:0002204!2.02e-14!167;UBERON:0002371!1.68e-13!80;UBERON:0000926!1.50e-12!448;UBERON:0004120!1.50e-12!448;UBERON:0006603!1.50e-12!448;UBERON:0001474!5.99e-12!86;UBERON:0004765!1.44e-10!101;UBERON:0001434!1.44e-10!101;UBERON:0002384!4.11e-10!375;UBERON:0002405!1.27e-08!115;UBERON:0004535!1.96e-08!110;UBERON:0001637!2.45e-08!42;UBERON:0003509!2.45e-08!42;UBERON:0004572!2.45e-08!42;UBERON:0001009!4.33e-08!113;UBERON:0004872!1.73e-07!84;UBERON:0004573!3.25e-07!33;UBERON:0004571!3.25e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.84e-23,203;UBERON:0002390,7.26e-19,98;UBERON:0003061,7.26e-19,98;UBERON:0002371,5.52e-18,76;UBERON:0002193,1.73e-17,108;UBERON:0001474,3.69e-16,82;UBERON:0004765,5.29e-16,90;UBERON:0000926,7.66e-16,315;UBERON:0004120,7.66e-16,315;UBERON:0006603,7.66e-16,315;UBERON:0002204,4.18e-14,167;UBERON:0002405,1.05e-13,93;UBERON:0001434,1.08e-13,100;UBERON:0002384,3.01e-08,371 | |||
|phase1_expression=1.09007027562334,0.214100523890983,1.55049844505568,0,0.893922188854576,0.872338524100369,2.53299878168311,1.26343974685366,1.30592814099919,0.982935746006035,1.39560233594486,5.46103430325431,3.69273769519835,0.247532705920093,0,2.01697543935533,1.20538905604795,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0,0,0,0.382067028739756,0.492603536699674,0.314843125254717,1.18009283054671,1.15148819429164,2.78669021968937,0,0.30120591877825,0,0,0.284338464974843,0.293600439334847,1.10799081706375,1.20326668482085,1.51907609501096,0.671746422719773,0.32389366601898,0.257575567634187,6.97911546141911,11.7141542543531,11.1588668146395,16.0376035464922,26.7259127214187,30.041517976825,10.3569261235974,13.3203567395132,14.1889337933151,11.0318617835718,21.9464792418501,13.5426486594342,12.8004790888971,22.1053981546855,17.5284317867166,16.5285301880287,20.8603867599461,11.5080682643827,1.9791078011203,4.9865914405408,2.13112375266347,5.22376629531451,9.64554881974938,4.9825779919646,10.5524439407832,11.9941071236646,13.4657083717172,1.81619850790011,6.62899744777616,4.1140110367315,3.16882929467913,3.82687739937078,1.67726916406701,1.12328631146495,0.901061357049038,0.64290234678832,4.27519115611873,6.16641699317179,2.73996230646951,0,0.546138611262131,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0.263384084775077,0.393419540227666,1.17903228824749,1.64481199199607,0.167186495390678,1.30368906653436,0.473447805734733,0,1.78256731016278,1.47302953737419,0.664601683750863,0.270803863765016,0.768547918354051,0.780356085359269,1.31550323682941,0,1.15921234294021,0.444859689486181,0,0,0.566546713487831,0.383220493601921,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0,0.255973222308837,0,0.236777252044017,0.821127996921047,0.403213486449465,0.267440195783507,0.579297615531196,0,3.35350429851818,3.06870148424473,1.0843174571537,0.50133791063589,0.434539556882471,1.5905718941022,3.40644409211845,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0.870648686496336,1.06366368415092,0,0,0,0.993812036833525,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0.835979866147242,0.258416759169329,0,0.33472061276467,0.805658634218294,0.760272105718513,0,1.47065232138347,0.81014194788176,0.446498641420399,0.22452937262617,0.563057402416611,0,0,0.366403487860815,0,0,0,0.496971951695318,1.64619665163954,0.264818361626438,0.860509862246441,0.709336764396714,2.80338800071154,4.2699598291882,2.4666754841716,0,0.808264032418128,0.653847612453835,0.454072282934794,0,1.17160715916898,0,1.1409436430889,0.747243402759005,0.117434498643765,0.161872944368132,0,0.408308342509787,0.245668634623536,0.413303124703062,1.18800285728205,0.494533858557114,2.73048408581408,2.15585442544872,0,0.125118519871964,1.10825646193673,0.438977620880838,1.22595118319608,0.45071417671979,1.13432183160021,0,0.85422955527427,1.69545520927649,0.300091096084402,1.03052529238439,0.772921620136887,1.48893485065272,1.18143432568886,0.584622030967192,0.504867548488229,0.644349290496095,0.484938170456436,0.355009592516614,1.5112814734146,0.67824236924195,3.09217365061275,1.09098448236334,2.58124135850103,0.487894824518382,0.795178609928912,1.04574548582567,0.932949495138334,1.00928340350251,0.36497735907583,4.69348596989448,7.07565032012174,13.8134921352481,0.464367928031979,1.44375896333917,1.41968160047813,0.842923450390509,0.964044119533928,1.10293972732394,0.435758888184812,0.474541238222193,0.674156540800822,1.37355025587742,0.38474715694639,0.738155454624648,1.40241773803446,2.4694440679884,4.41026134156626,0,0,0,0,0,0.171567810298526,0.548751427043128,2.24803506515239,0.402115889646523,0.0925884451585296,0,0,0,0,0.469634776943287,0.144366447761074,1.38895653772983,0.190254152234598,0,0,0.492434012174795,5.6161023633417,2.52672975890838,1.87467667973554,2.35174979478403,1.27597587518148,0.179117045405697,0.290633938513962,0.383382679165211,85.2307401559982,1.05658120815871,3.10992173311158,3.31475892859011,1.64115163454294,0,0.381988425558278,0,0,0.102827492703324,0,0,1.56983518083505,0.43596006883328,0.80672114403045,0.646358578788889,17.8828222925941,0.845302752556,0.26593811658487,0,0.771622122786426,0,0.799266537048298,0.57191197463259,9.76718889704597,1.64648067356154,0.977208552881205,1.42156779497018,0,5.12446941001296,11.3299349618038,2.49932477955143,6.08118903205952,1.00451418286425,0,1.67737398844108,1.14861935834114,0,0.434343920002738,0,0.179060963239896,0.112085143993527,0.197030760201927,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,1.24324654030811,0.36807447515742,1.00034104211935,0.271265023699736,0.623912584592421,0.535286966391485,1.73472656537328,0.819989904948992,0.601892199455438,2.27407504055985,0,1.32845119707087,0.368738337083406,0.781952530212746,0.195801157462741,0.343143423810856,0.413536052245775,0.431428401637234,0.960548020230999,2.72814814301633,6.65741758041988,4.23346410661552,2.97729369382532,0.61384789315225,0.561320188866147,2.17836553734692,0.511707249066704,1.28683136914886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| |||
|short_description=p5@FXYD5 | |||
}} |
Revision as of 22:44, 20 January 2014
Short description: | p5@FXYD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FXYD5_5end |
Coexpression cluster: | C2349_Mast_CD14_Smooth_Mesenchymal_Hair_mesothelioma_papillotubular |
Association with transcript: | 473bp_to_ENST00000342879_5end |
EntrezGene: | FXYD5 |
HGNC: | 4029 |
UniProt: | Q96DB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.55e-31 | 48 |
phagocyte | 5.55e-31 | 48 |
classical monocyte | 9.44e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.44e-31 | 42 |
myeloid leukocyte | 8.86e-24 | 72 |
myeloid lineage restricted progenitor cell | 1.51e-23 | 66 |
granulocyte monocyte progenitor cell | 6.58e-23 | 67 |
monopoietic cell | 5.77e-22 | 59 |
monocyte | 5.77e-22 | 59 |
monoblast | 5.77e-22 | 59 |
promonocyte | 5.77e-22 | 59 |
myeloid cell | 1.10e-21 | 108 |
common myeloid progenitor | 1.10e-21 | 108 |
macrophage dendritic cell progenitor | 1.12e-20 | 61 |
multi fate stem cell | 1.04e-12 | 427 |
somatic stem cell | 2.29e-12 | 433 |
stem cell | 5.96e-12 | 441 |
mesenchymal cell | 5.47e-10 | 354 |
hematopoietic oligopotent progenitor cell | 7.40e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.40e-10 | 161 |
connective tissue cell | 2.12e-09 | 361 |
hematopoietic cell | 9.98e-09 | 177 |
hematopoietic stem cell | 1.29e-08 | 168 |
vascular associated smooth muscle cell | 5.10e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 5.53e-08 | 120 |
motile cell | 5.35e-07 | 386 |
leukocyte | 8.70e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.84e-23 | 203 |
hematopoietic system | 7.26e-19 | 98 |
blood island | 7.26e-19 | 98 |
bone marrow | 5.52e-18 | 76 |
hemolymphoid system | 1.73e-17 | 108 |
bone element | 3.69e-16 | 82 |
skeletal element | 5.29e-16 | 90 |
mesoderm | 7.66e-16 | 315 |
mesoderm-derived structure | 7.66e-16 | 315 |
presumptive mesoderm | 7.66e-16 | 315 |
musculoskeletal system | 4.18e-14 | 167 |
immune system | 1.05e-13 | 93 |
skeletal system | 1.08e-13 | 100 |
connective tissue | 3.01e-08 | 371 |