FFCP PHASE1:Hg19::chr19:39899540..39899551,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-286bp_to_AJ227917_5end | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_2_at_AJ227917_5end | |||
|id=chr19:39899540..39899551,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.44e-28!42;CL:0000860!9.92e-26!45;CL:0000738!3.07e-24!140;CL:0000766!6.30e-23!76;CL:0000557!1.68e-18!71;CL:0002009!6.39e-18!65;CL:0002194!1.04e-16!63;CL:0000576!1.04e-16!63;CL:0000040!1.04e-16!63;CL:0000559!1.04e-16!63;CL:0000839!1.05e-16!70;CL:0002087!2.46e-16!119;CL:0002031!3.03e-16!124;CL:0000037!4.27e-16!172;CL:0000566!4.27e-16!172;CL:0000988!2.05e-14!182;CL:0002032!8.33e-14!165;CL:0000837!8.33e-14!165;CL:0000763!5.00e-13!112;CL:0000049!5.00e-13!112;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9;CL:0002320!2.97e-07!365;CL:0000094!3.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.33e-43;33!CL:0002057;7.33e-43;33!CL:0000473;1.44e-32;39!CL:0000234;1.44e-32;39!CL:0000576;1.29e-31;48!CL:0000766;6.47e-29;69!CL:0000094;1.47e-14;8!CL:0000763;1.59e-12;100!CL:0002087;1.65e-12;104!CL:0000738;1.24e-11;136!CL:0002393;1.73e-11;6!CL:0002397;1.73e-11;6!CL:0000081;4.40e-10;11!CL:0000988;5.27e-07;177!CL:0000219;7.44e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.41e-62,42;CL:0002057,4.41e-62,42;CL:0000766,2.82e-61,72;CL:0000473,2.89e-58,48;CL:0000234,2.89e-58,48;CL:0000738,4.10e-52,136;CL:0000557,9.13e-51,67;CL:0002009,3.96e-49,61;CL:0000839,8.97e-47,66;CL:0002194,4.66e-46,59;CL:0000576,4.66e-46,59;CL:0000040,4.66e-46,59;CL:0000559,4.66e-46,59;CL:0000763,3.20e-40,108;CL:0000049,3.20e-40,108;CL:0000037,4.64e-38,168;CL:0002031,8.16e-38,120;CL:0002032,3.53e-35,161;CL:0000837,3.53e-35,161;CL:0002087,3.58e-35,115;CL:0000988,4.93e-35,177;CL:0002393,2.55e-15,9;CL:0002397,2.55e-15,9;CL:0000134,6.67e-15,354;CL:0002320,9.49e-15,361;CL:0000094,1.53e-14,8;CL:0000219,1.14e-11,386;CL:0000081,4.51e-10,11;CL:0000048,3.71e-09,427;CL:0000034,3.94e-09,441;CL:0000723,9.66e-09,433;CL:0000775,8.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.21e-44;42!CL:0000049;4.36e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-17!102;UBERON:0003061!1.72e-17!102;UBERON:0002193!3.40e-16!112;UBERON:0002371!8.75e-16!80;UBERON:0001474!3.15e-14!86;UBERON:0002405!1.36e-12!115;UBERON:0004765!2.37e-12!101;UBERON:0001434!2.37e-12!101;UBERON:0002384!5.92e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.94e-43,76;UBERON:0002390,2.99e-41,98;UBERON:0003061,2.99e-41,98;UBERON:0001474,1.67e-40,82;UBERON:0002193,2.05e-37,108;UBERON:0004765,4.84e-37,90;UBERON:0001434,4.85e-35,100;UBERON:0002405,6.45e-34,93;UBERON:0002204,1.65e-16,167;UBERON:0003081,8.05e-16,203;UBERON:0002384,9.54e-14,371;UBERON:0000926,6.08e-07,315;UBERON:0004120,6.08e-07,315;UBERON:0006603,6.08e-07,315 | |||
|phase1_expression=0.908391896352783,1.49870366723688,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.618831764800233,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0,3.54027849164014,2.30297638858328,3.2511385896376,0,0,0,0.154934401160603,0,0.293600439334847,2.76997704265939,8.02177789880567,9.11445657006578,0,0,0.257575567634187,2.18097358169347,3.02300754951048,0.727752183563449,4.41615170120801,2.46700732813095,3.71647645074124,8.91846416198666,6.40401766322752,3.78371567821736,6.55016793399575,1.93645405075148,2.70852973188684,3.9530891303947,3.547779950752,2.69668181334102,12.8555234795779,3.20929027076094,10.8687311385837,2.63881040149373,1.79517291859469,3.40979800426155,3.77272010217159,3.97169657283798,1.86846674698672,7.78870862295904,3.65038042894141,5.42972111762792,3.02699751316684,2.20966581592539,2.53169909952708,5.28138215779854,5.74031609905618,3.14487968262564,2.3589012540764,2.70318407114711,1.28580469357664,1.99508920618874,3.77941686678271,1.46131323011707,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,4.69789751496751,6.88091810625412,2.64342657158052,1.68152568894461,0,0.786839080455332,9.43225830597995,8.8408644569789,0,0.32592226663359,0.473447805734733,0,0,0.883817722424512,0.886135578334485,0.812411591295047,0.128091319725675,0.650296737799391,0.164437904603676,0,0,0.889719378972363,0.267540828089713,3.1360657141493,0.113309342697566,0,0,1.26509846009751,0.637130828648193,0.651083453856419,0,0.150575119077773,0.639933055772092,0,0.236777252044017,0,3.62892137804518,6.41856469880418,3.04131248153878,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,2.62339686735876,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.732186172644509,0,0,0.0892997282840798,0,0,0,0,0,5.27121669744253,11.6334079244498,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0,0,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0.80823028409406,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,3.71494342425583,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,3.54473944008842,0.882926198829301,0,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0.144366447761074,2.31492756288305,0.190254152234598,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0.358234090811393,0.581267877027924,0.766765358330422,0,0.176096868026452,6.01251535068239,4.4677185559258,3.40854570251226,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,3.57656445851882,0,0,0,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,0,4.21667878966063,0,0,0,0,0.205476322550383,0.179060963239896,0,2.36436912242313,7.33133754522359,4.10697716095195,0,0,0,0.335032530668698,0,18.7251755986796,20.9413021442817,2.90090859405225,0.736148950314839,1.00034104211935,0,0.207970861530807,1.07057393278297,0.630809660135739,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0.413536052245775,4.31428401637234,4.90946765895844,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.241718899183244,0,0.644566922551274,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.510450849978337,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,4.64436797654861,2.30506425071931,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0.764637207142375,1.70894156152249,1.66762242820452,0,1.29694662238543,0.540031437238115,2.37937552888281,0,0,0,0.371606350251437,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0.111443384277478,0,0.47748896947538,0,1.53580351049616,0.994147647766298,0.140669416410513,0,0.494411622680279,0.211125408127993,3.98495976502139,0.552567831062295,0,0,0.246169610922139,0,0,0.179021174675609,0,0.295930216910801,2.3948309234694,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0.508507300585533,0,0,0,0.173624994933292,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0.113942055847001,0,0,0,1.91400695839152,0.0915975934018623,6.39641731222362,0,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.247127877893006,0,0.134802265961354,3.21031058919516,0.234264445725339,0.364909578431332,0,0.242780379534093,0.394584402849391,1.20990716048664,0,0.505492637027904,0.150323419414493,0,0.664653872707185,0,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143777,0.435296032902013,0.34945333648406,0,0,0.0730893170861856,0,0.775912131907355,0,1.12990370390266,0,0,0.0633107959558787,0.195551382734803,0,1.49417096317547,0.19980960958213,0.288180834308212,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0.525774708558629,1.39641200636127,0,0,0.599037001496973,1.71690419254628,0.223171457441873,0.268733889946905,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0.136203406111576,0.321506296930038,0,0,2.69968669861801,10.8332273638113,0,0.335434687599266,0.0788057072991982,0.104909176269996,0.211200673038813,0.896436696664224,0.383830394638891,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0.246277562248017,0,0.113312091520126,0.293104467356165,2.65013777824443,0.387848869084652,0.39669780522807,0,0,0.533937062838473,0.78602152549833,2.89967338743037,0.992332043623902,0.790446527591777,0.121792598380896,0,0,1.5041393641362,0.919036730290385,0.655745261419609,0,1.77213635993397,3.41673541725497,0.250381861413,1.72022758707021,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.947015026375446,0,0,1.83072054717539,1.51230923763239,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0.181848659202559,0.429642228169954,0.464033759878494,0,0.400027764663154,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,1.94860308839388,0.132864840313363,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0,2.1160556621441,0.3062454773532,0,0,0.638535436228605,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0.49131575253029,0,0.0675375846183947,1.56215619722769,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.345701962667338,0.171488009437418,0.0679697329768317,0,0.236387681767936,0.111231401892069,0.39246546425257,0.157115589916002,0,0,0.431855182437243,2.38875843943525,0.285906176706625,0,0.116241425368125,0,0.801711364730253,0.207216164163037,0.6828739083758,0.691259661814092,0.860454717640555,0.118332000730565,0,1.27016115057279,0.68732060563215,0,0,0.223710863595585,0.098150233615243,0,0,0.205325613712494,0,2.4285549652957,0,0,0.356760272332706,0,0,0.150962843566674,0.463044948647668,0.437119121007915,0,1.96118657403124,0,2.1593931382644,0,1.2679671827502,0,0,0.386747327841463,0.0999411559249289,0,0,0.0802413666891683,0,0,0.573358332605805,0.157771562193185,0,0,0.5290268405154,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.606229585745915,0,0.829169439458779,0,1.0661699095049,0.23806443146374,0.0645889098360061,0.186224142887574,0.224263725161227,0.12729431655633,2.02117188958219,3.04803447055746,2.39563310759697,0.134704106029175,0.358611026963382,0.665320713092027,0.0814032686109745,0.426909383510862,0,0.269475606319761,0,0.733448665097199,0.406896178315738,0,0.603821380773079,0 | |||
|short_description=p2@AJ227917 | |||
}} |
Revision as of 23:14, 20 January 2014
Short description: | p2@AJ227917 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AJ227917_5end |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | -286bp_to_AJ227917_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.94e-43 | 76 |
hematopoietic system | 2.99e-41 | 98 |
blood island | 2.99e-41 | 98 |
bone element | 1.67e-40 | 82 |
hemolymphoid system | 2.05e-37 | 108 |
skeletal element | 4.84e-37 | 90 |
skeletal system | 4.85e-35 | 100 |
immune system | 6.45e-34 | 93 |
musculoskeletal system | 1.65e-16 | 167 |
lateral plate mesoderm | 8.05e-16 | 203 |
connective tissue | 9.54e-14 | 371 |
mesoderm | 6.08e-07 | 315 |
mesoderm-derived structure | 6.08e-07 | 315 |
presumptive mesoderm | 6.08e-07 | 315 |