FFCP PHASE1:Hg19::chr1:145244475..145244480,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C743 | |||
|description=CAGE_peak_at_chr1:145244475..145244480,+ | |||
|id=chr1:145244475..145244480,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.17e-93!42;CL:0000860!3.20e-86!45;CL:0000557!1.61e-67!71;CL:0002009!2.81e-63!65;CL:0000839!3.16e-61!70;CL:0000766!4.88e-59!76;CL:0002194!5.36e-58!63;CL:0000576!5.36e-58!63;CL:0000040!5.36e-58!63;CL:0000559!5.36e-58!63;CL:0000763!1.25e-46!112;CL:0000049!1.25e-46!112;CL:0002031!9.11e-37!124;CL:0000738!2.24e-33!140;CL:0002032!4.23e-30!165;CL:0000837!4.23e-30!165;CL:0002087!1.32e-28!119;CL:0000037!1.82e-28!172;CL:0000566!1.82e-28!172;CL:0000988!2.38e-26!182;CL:0000134!2.26e-11!358;CL:0002320!5.96e-11!365;CL:0000219!1.81e-09!390;CL:0001014!4.75e-08!2;CL:0001016!4.75e-08!2;CL:0000048!1.04e-07!430;CL:0000723!1.85e-07!436;CL:0000034!3.89e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.75e-120;33!CL:0002057;1.75e-120;33!CL:0000473;5.10e-83;39!CL:0000234;5.10e-83;39!CL:0000576;6.22e-54;48!CL:0000766;3.94e-33;69!CL:0002087;2.68e-15;104!CL:0000763;6.24e-15;100!CL:0000738;3.36e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.42e-102,42;CL:0002057,9.42e-102,42;CL:0000473,1.37e-88,48;CL:0000234,1.37e-88,48;CL:0002009,9.90e-74,61;CL:0002194,3.77e-70,59;CL:0000576,3.77e-70,59;CL:0000040,3.77e-70,59;CL:0000559,3.77e-70,59;CL:0000557,6.67e-67,67;CL:0000839,1.93e-62,66;CL:0000766,5.25e-57,72;CL:0000763,2.48e-40,108;CL:0000049,2.48e-40,108;CL:0002031,5.92e-36,120;CL:0002087,1.74e-34,115;CL:0000738,2.63e-31,136;CL:0002032,7.10e-26,161;CL:0000837,7.10e-26,161;CL:0000037,1.22e-24,168;CL:0000988,3.39e-23,177;CL:0000134,1.37e-09,354;CL:0002320,2.53e-09,361;CL:0000219,2.22e-08,386;CL:0000048,3.20e-07,427;CL:0000723,4.62e-07,433;CL:0000034,7.44e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.77e-74;42!CL:0000049;1.55e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.13e-59!80;UBERON:0001474!3.33e-54!86;UBERON:0004765!8.34e-45!101;UBERON:0001434!8.34e-45!101;UBERON:0002390!2.82e-44!102;UBERON:0003061!2.82e-44!102;UBERON:0002193!1.68e-39!112;UBERON:0002405!3.15e-38!115;UBERON:0002204!2.05e-23!167;UBERON:0003081!4.67e-17!216;UBERON:0002384!2.23e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-58,76;UBERON:0001474,3.83e-54,82;UBERON:0004765,4.69e-49,90;UBERON:0002405,2.27e-47,93;UBERON:0002390,8.68e-45,98;UBERON:0003061,8.68e-45,98;UBERON:0001434,7.95e-44,100;UBERON:0002193,2.48e-40,108;UBERON:0002204,8.22e-25,167;UBERON:0003081,9.82e-20,203;UBERON:0000926,2.71e-11,315;UBERON:0004120,2.71e-11,315;UBERON:0006603,2.71e-11,315;UBERON:0002384,5.87e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,1.13362783106643,3.15359279544161,0.929716147622738,4.11167888021826,9.29119112685311,0.863077176966451,1.2808035326455,2.60130452877444,3.10271112662957,6.45484683583826,12.1883837934908,1.31769637679823,1.91034305040492,1.12361742222542,2.44867113896722,1.92557416245656,5.75403413219137,0.989553900560148,0.598390972864896,0,2.32167390902867,1.70215567407342,4.9825779919646,1.00499466102697,10.429658368404,1.95469960234605,1.21079900526674,3.31449872388808,2.84816148696796,0,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0,0,1.04535523804977,0.566546713487831,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:145244475..145244480,+ | |||
}} |
Revision as of 20:30, 10 January 2014
Short description: | p@chr1:145244475..145244480, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:145244475..145244480, + |
Coexpression cluster: | C743_CD14_anaplastic_skeletal_submaxillary_Fibroblast_peripheral_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.42e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.42e-102 | 42 |
defensive cell | 1.37e-88 | 48 |
phagocyte | 1.37e-88 | 48 |
macrophage dendritic cell progenitor | 9.90e-74 | 61 |
monopoietic cell | 3.77e-70 | 59 |
monocyte | 3.77e-70 | 59 |
monoblast | 3.77e-70 | 59 |
promonocyte | 3.77e-70 | 59 |
granulocyte monocyte progenitor cell | 6.67e-67 | 67 |
myeloid lineage restricted progenitor cell | 1.93e-62 | 66 |
myeloid leukocyte | 5.25e-57 | 72 |
myeloid cell | 2.48e-40 | 108 |
common myeloid progenitor | 2.48e-40 | 108 |
hematopoietic lineage restricted progenitor cell | 5.92e-36 | 120 |
nongranular leukocyte | 1.74e-34 | 115 |
leukocyte | 2.63e-31 | 136 |
hematopoietic oligopotent progenitor cell | 7.10e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.10e-26 | 161 |
hematopoietic stem cell | 1.22e-24 | 168 |
hematopoietic cell | 3.39e-23 | 177 |
mesenchymal cell | 1.37e-09 | 354 |
connective tissue cell | 2.53e-09 | 361 |
motile cell | 2.22e-08 | 386 |
multi fate stem cell | 3.20e-07 | 427 |
somatic stem cell | 4.62e-07 | 433 |
stem cell | 7.44e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-58 | 76 |
bone element | 3.83e-54 | 82 |
skeletal element | 4.69e-49 | 90 |
immune system | 2.27e-47 | 93 |
hematopoietic system | 8.68e-45 | 98 |
blood island | 8.68e-45 | 98 |
skeletal system | 7.95e-44 | 100 |
hemolymphoid system | 2.48e-40 | 108 |
musculoskeletal system | 8.22e-25 | 167 |
lateral plate mesoderm | 9.82e-20 | 203 |
mesoderm | 2.71e-11 | 315 |
mesoderm-derived structure | 2.71e-11 | 315 |
presumptive mesoderm | 2.71e-11 | 315 |
connective tissue | 5.87e-09 | 371 |