FFCP PHASE1:Hg19::chr1:1981890..1981945,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5590 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9412 | |||
|TSSclassifier=strong | |||
|UniProt=Q05513,F2Z3C5 | |||
|association_with_transcript=0bp_to_ENST00000378567,ENST00000468310,ENST00000484419,NM_002744,uc001aiq.2_5end | |||
|description=CAGE_peak_2_at_PRKCZ_5end | |||
|id=chr1:1981890..1981945,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.39e-33!254;CL:0000223!2.02e-16!59;CL:0002076!9.27e-15!43;CL:0002368!1.67e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.39e-12;42!CL:0002368;1.85e-07;13!CL:0002251;3.22e-07;20!CL:1000507;5.73e-07;10!CL:1000494;5.73e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.41e-34,253;CL:0000223,3.50e-17,58;CL:0002076,5.47e-16,42;CL:0002368,1.79e-07,13;CL:0002251,2.69e-07,20;CL:1000507,5.65e-07,10;CL:1000494,5.65e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;1.53e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.88e-16!106;DOID:0050687!1.21e-13!143;DOID:299!4.04e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.82e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.22e-16,106;DOID:0050687,1.05e-13,143;DOID:299,2.99e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.17e-16!169;UBERON:0000925!1.17e-16!169;UBERON:0006595!1.17e-16!169;UBERON:0004921!1.59e-14!129;UBERON:0004185!1.59e-14!129;UBERON:0005177!1.61e-13!107;UBERON:0000077!1.05e-12!130;UBERON:0001007!1.06e-12!155;UBERON:0001555!1.06e-12!155;UBERON:0007026!1.06e-12!155;UBERON:0000466!1.14e-12!126;UBERON:0000464!1.60e-11!104;UBERON:0001041!2.48e-11!98;UBERON:0005911!1.99e-09!82;UBERON:0006554!8.05e-09!44;UBERON:0001008!1.01e-08!45;UBERON:0001004!1.57e-08!72;UBERON:0001048!2.55e-08!168;UBERON:0005172!3.84e-08!55;UBERON:0005173!3.84e-08!55;UBERON:0009569!8.08e-08!113;UBERON:0005153!9.05e-08!37;UBERON:0000065!4.00e-07!53;UBERON:0002113!4.58e-07!27;UBERON:0003918!4.58e-07!27;UBERON:0005095!4.58e-07!27;UBERON:0007687!4.58e-07!27;UBERON:0005157!5.64e-07!51;UBERON:0002048!5.74e-07!22;UBERON:0000117!5.74e-07!22;UBERON:0000171!5.74e-07!22;UBERON:0000170!5.74e-07!22;UBERON:0005597!5.74e-07!22;UBERON:0000118!5.74e-07!22;UBERON:0005178!8.48e-07!34;UBERON:0002224!8.48e-07!34;UBERON:0008947!8.53e-07!38;UBERON:0003258!8.53e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.96e-11;30!UBERON:0001008;3.96e-11;30!UBERON:0002113;3.38e-08;24!UBERON:0011143;3.38e-08;24!UBERON:0004921;2.91e-07;33!UBERON:0000489;3.63e-07;29!UBERON:0004211;5.73e-07;10!UBERON:0009773;5.73e-07;10!UBERON:0001231;5.73e-07;10!UBERON:0004810;5.73e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.62e-16,160;UBERON:0000925,2.62e-16,160;UBERON:0006595,2.62e-16,160;UBERON:0005177,7.53e-16,101;UBERON:0004921,6.99e-14,118;UBERON:0001007,2.63e-12,145;UBERON:0001555,2.63e-12,145;UBERON:0007026,2.63e-12,145;UBERON:0006554,5.37e-12,47;UBERON:0001008,7.38e-12,48;UBERON:0001041,7.39e-11,87;UBERON:0005911,7.65e-09,82;UBERON:0009569,7.81e-09,112;UBERON:0005172,8.13e-09,54;UBERON:0005173,8.13e-09,54;UBERON:0001004,2.25e-08,74;UBERON:0002113,3.19e-08,26;UBERON:0003918,3.19e-08,26;UBERON:0011143,3.19e-08,26;UBERON:0005095,3.19e-08,26;UBERON:0007687,3.19e-08,26;UBERON:0005153,2.84e-07,37;UBERON:0000489,2.94e-07,31;UBERON:0001048,4.53e-07,160;UBERON:0000065,4.68e-07,54;UBERON:0004810,5.65e-07,10;UBERON:0005178,7.49e-07,34;UBERON:0002224,7.49e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,13.02389863458,82.3405378207464,11.1405099786388,19.2549894106771,0,0,0,0,0,0,0.738726348460727,1.02000345622126,0.940364164434263,0.85870796139317,0.958120975510189,0.251085279189606,0,0,0,0.393364276848904,1.15148819429164,1.54816123316076,12.871897142705,19.8795906393645,21.4457325896737,0,4.54941543959749,0.587200878669695,0.553995408531877,0.401088894940283,2.17010870715852,0.223915474239924,0.971680998056939,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0.545812300115692,0,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.75374599577023,0,0,1.81619850790011,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0,0,3.51992488922645,3.82297027883492,1.77901850772711,2.56038133539904,3.60356388332411,5.74752439954483,1.98313461835459,6.67837628174755,7.96898156753228,0.587237189370939,4.58727873750275,1.32171328579026,1.68152568894461,0,6.68813218387032,3.93010762749165,7.60725546298184,2.67498392625085,3.91106719960308,4.73447805734733,11.6896037044747,2.22820913770347,5.59751224202191,5.31681347000691,5.68688113906533,3.97083091149593,4.03183977435623,2.79544437826249,2.76350017785848,2.02862160014537,5.04174314751005,3.47803076516627,7.31748666634838,0.906474741580529,6.89796888483458,5.15441168223945,5.56643322442906,4.77848121486145,7.1619179924206,3.8018081777935,3.01150238155546,3.58362511232371,3.74792179657038,5.20909954496837,3.28451198768419,5.44338206706778,6.95344509037119,6.22744936696036,0,2.68280343881454,1.15076305659177,0,0,0,0,0,2.74150969775797,5.98669373148923,4.56740885604255,5.89405839739707,21.8577172975525,7.78647329847302,0.97364218096405,0.348259474598534,1.32957960518865,0.953962497221368,1.14398982156026,0,0,0.860234595106124,0,0,0,0,0,0,0,0,4.02829317109147,3.04108842287405,12.6912269925048,0,0,0.357198913136319,0.673588117878509,0.450445921933289,0,0,0,1.31780417436063,0,22.6768907114118,0,0,0,0,0.354668382198357,1.12135520028461,0,0,0,0.134710672069688,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,7.92369497969517,8.18238361772504,9.75135624322613,14.2709236171627,14.5782745153634,13.8270792014727,12.2320044918137,9.08355063152262,9.48941133597158,0,0,0,0,0,1.65629520055781,1.01150814046861,1.44606617930089,1.43382164552112,1.74303555273925,1.89816495288877,1.48314438976181,2.74710051175484,2.30848294167834,0.738155454624648,1.40241773803446,1.2347220339942,1.47008711385542,7.60530208930985,4.91413608338813,2.36315962672562,0,5.65746817298322,1.54411029268673,10.4262771138194,14.6122279234905,9.4497234066933,11.2032018641821,0,0,0,4.17349457910277,2.81780866165972,3.17606185074362,3.24089858803628,3.23432058798817,15.8040879591855,7.72637545885385,0,0.468008530278475,0.297262324577456,3.74935335947108,10.5828740765282,6.94697976487694,6.00042102109084,8.13775027839093,15.7186898457737,3.4486426652716,4.75461543671421,6.63449969730471,5.47655822984453,9.21569764012574,0,0.381988425558278,0,0,0,0,0,0.560655421726804,0.43596006883328,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0,0,1.64648067356154,0,0.355391948742546,0,2.71295439353627,6.10073421020206,5.89840647974137,0,0,0,0,0,0,0,0,0,0,4.72873824484625,4.31255149719035,5.39040752374943,0,1.30139853857622,0,0,0,5.24304916763028,0,1.24324654030811,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,2.89475236572042,0.431428401637234,3.52200940751366,19.7032921440069,11.6504807657348,19.6553690664292,0,0,0,0,0,0,0,0,0,0,0,0,7.00984807631409,13.8349464509267,4.78821142466661,0,0,0.524497659837696,13.9871880001298,10.8591625317225,19.6087442294214,16.0753147118587,7.8108205380728,2.27466768141793,0.170093705276516,2.15915916102139,4.62681758070868,12.7344825645611,18.5625216326296,7.39141191830611,4.15538004464362,9.40273969833149,0,0,9.4886546293064,15.7447029935859,10.0867302345934,10.2010601531245,0,0.082509499920588,11.4853107599234,13.6512651667669,1.6068392984416,0,0,0,0,0,0,0.255679882248303,0,7.27253627588304,9.60950336825531,9.06050258711547,7.48567578331069,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,1.95053495635836,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.491245205065606,0,0,0.211107635297664,0,0.379473173765715,0,8.7562122580216,15.4169523373231,20.6892871236513,9.79095528078503,17.2202149068492,15.1624328100863,22.6149378303705,16.769808215108,3.55213326462519,2.29391162142713,2.84823593587081,4.04994018278241,2.05681136543097,2.59389324477087,2.70015718619057,5.55187623405989,13.6734811043166,0,11.5168901511085,0,0,0,0,3.39284931435788,0.957526850661834,0,0,0,0,0,5.01268954180134,1.86220955581764,0,0.403599414382095,3.40676990152261,0,1.84344458585075,2.90778940260141,1.50164227540718,0,0,0,5.13865789104368,0,0,6.54991891428769,0.146508179271894,2.6699314784893,0,0.852408440419239,9.07229042003222,16.6300221266278,9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| |||
|short_description=p2@PRKCZ | |||
}} |
Revision as of 15:52, 10 January 2014
Short description: | p2@PRKCZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKCZ_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378567, ENST00000468310, ENST00000484419, NM_002744, uc001aiq.2_5end |
EntrezGene: | PRKCZ |
HGNC: | 9412 |
UniProt: | Q05513F2Z3C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.41e-34 | 253 |
endodermal cell | 3.50e-17 | 58 |
endo-epithelial cell | 5.47e-16 | 42 |
respiratory epithelial cell | 1.79e-07 | 13 |
epithelial cell of alimentary canal | 2.69e-07 | 20 |
kidney tubule cell | 5.65e-07 | 10 |
nephron tubule epithelial cell | 5.65e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.62e-16 | 160 |
endoderm | 2.62e-16 | 160 |
presumptive endoderm | 2.62e-16 | 160 |
trunk region element | 7.53e-16 | 101 |
subdivision of digestive tract | 6.99e-14 | 118 |
digestive system | 2.63e-12 | 145 |
digestive tract | 2.63e-12 | 145 |
primitive gut | 2.63e-12 | 145 |
urinary system structure | 5.37e-12 | 47 |
renal system | 7.38e-12 | 48 |
foregut | 7.39e-11 | 87 |
endo-epithelium | 7.65e-09 | 82 |
subdivision of trunk | 7.81e-09 | 112 |
abdomen element | 8.13e-09 | 54 |
abdominal segment element | 8.13e-09 | 54 |
respiratory system | 2.25e-08 | 74 |
kidney | 3.19e-08 | 26 |
kidney mesenchyme | 3.19e-08 | 26 |
upper urinary tract | 3.19e-08 | 26 |
kidney rudiment | 3.19e-08 | 26 |
kidney field | 3.19e-08 | 26 |
epithelial bud | 2.84e-07 | 37 |
cavitated compound organ | 2.94e-07 | 31 |
primordium | 4.53e-07 | 160 |
respiratory tract | 4.68e-07 | 54 |
nephron tubule epithelium | 5.65e-07 | 10 |
thoracic cavity element | 7.49e-07 | 34 |
thoracic cavity | 7.49e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.22e-16 | 106 |
cell type cancer | 1.05e-13 | 143 |
adenocarcinoma | 2.99e-08 | 25 |