FFCP PHASE1:Hg19::chr1:218519150..218519159,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-231bp_to_uc001hll.2,uc001hlm.2,uc001hln.2,uc001hlo.2,uc010pue.1_5end | |||
|coexpression_cluster_id=C927 | |||
|description=CAGE_peak_20_at_TGFB2_5end | |||
|id=chr1:218519150..218519159,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;3.99e-23;3!CL:1000428;3.99e-23;3!CL:0002549;1.06e-15;2!CL:0002559;4.07e-14;5!CL:0000064;8.87e-11;3!CL:0000067;8.87e-11;3!CL:0005012;8.87e-11;3!CL:0002304;8.87e-11;3!CL:0000511;1.05e-08;1!CL:0002625;1.05e-08;1!CL:0000222;1.05e-08;1!CL:0000216;1.05e-08;1!CL:0000306;1.47e-08;4!CL:0002222;1.47e-08;4!CL:0002224;1.47e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.45e-23,3;CL:1000428,1.45e-23,3;CL:0002549,9.87e-16,2;CL:0002559,2.23e-14,5;CL:0000064,8.47e-11,3;CL:0000067,8.47e-11,3;CL:0005012,8.47e-11,3;CL:0002304,8.47e-11,3;CL:0000511,5.28e-09,1;CL:0002625,5.28e-09,1;CL:0000216,5.28e-09,1;CL:0000306,1.22e-08,4;CL:0002222,1.22e-08,4;CL:0002224,1.22e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.65e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002616!1.15e-21!59;UBERON:0000033!1.17e-20!123;UBERON:0000955!1.38e-20!69;UBERON:0006238!1.38e-20!69;UBERON:0000153!1.73e-19!129;UBERON:0007811!1.73e-19!129;UBERON:0003075!2.24e-19!86;UBERON:0007284!2.24e-19!86;UBERON:0002346!9.40e-18!90;UBERON:0001049!2.80e-17!57;UBERON:0005068!2.80e-17!57;UBERON:0006241!2.80e-17!57;UBERON:0007135!2.80e-17!57;UBERON:0005743!3.03e-17!86;UBERON:0001017!6.63e-17!82;UBERON:0000073!1.28e-15!94;UBERON:0001016!1.28e-15!94;UBERON:0004121!1.39e-15!169;UBERON:0002020!3.07e-15!34;UBERON:0003528!3.07e-15!34;UBERON:0000924!1.05e-14!173;UBERON:0006601!1.05e-14!173;UBERON:0002791!1.57e-14!33;UBERON:0003056!1.94e-14!61;UBERON:0001893!7.28e-14!34;UBERON:0000119!1.22e-13!312;UBERON:0000477!3.33e-13!286;UBERON:0002780!4.15e-13!41;UBERON:0001890!4.15e-13!41;UBERON:0006240!4.15e-13!41;UBERON:0000481!5.26e-13!347;UBERON:0003080!1.38e-12!42;UBERON:0001869!1.94e-12!32;UBERON:0000483!2.50e-12!309;UBERON:0004111!7.25e-11!241;UBERON:0000956!1.91e-10!25;UBERON:0000203!1.91e-10!25;UBERON:0002200!4.39e-10!11;UBERON:0006876!4.39e-10!11;UBERON:0000025!4.76e-10!194;UBERON:0000475!4.93e-09!365;UBERON:0002619!1.95e-08!22;UBERON:0000064!6.27e-08!219;UBERON:0001950!5.46e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.99e-23;3!UBERON:0001992;3.99e-23;3!UBERON:0006876;9.37e-17;11!UBERON:0005629;1.06e-15;2!UBERON:0005358;1.06e-15;2!UBERON:0001886;1.06e-15;2!UBERON:0004086;1.06e-15;2!UBERON:0005282;1.06e-15;2!UBERON:0005281;1.06e-15;2!UBERON:0002073;4.07e-14;5!UBERON:0005284;4.55e-14;5!UBERON:0007625;4.27e-11;11!UBERON:0010371;7.59e-11;31!UBERON:0001778;8.87e-11;3!UBERON:0001775;8.87e-11;3!UBERON:0001282;4.17e-09;1!UBERON:0009842;4.17e-09;1!UBERON:0003704;4.17e-09;1!UBERON:0001171;4.17e-09;1!UBERON:0001172;4.17e-09;1!UBERON:0001801;9.52e-09;14!UBERON:0001136;1.05e-08;1!UBERON:0001343;1.05e-08;1!UBERON:0004910;1.05e-08;1!UBERON:0004813;1.05e-08;1!UBERON:0010077;1.47e-08;4!UBERON:0005389;1.47e-08;4!UBERON:0000484;1.47e-08;4!UBERON:0000965;1.47e-08;4!UBERON:0001803;1.47e-08;4!UBERON:0000488;2.67e-08;4!UBERON:0002067;4.60e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.45e-23,3;UBERON:0001992,1.45e-23,3;UBERON:0006876,8.81e-17,11;UBERON:0005629,9.87e-16,2;UBERON:0005358,9.87e-16,2;UBERON:0001886,9.87e-16,2;UBERON:0004086,9.87e-16,2;UBERON:0005282,9.87e-16,2;UBERON:0005281,9.87e-16,2;UBERON:0002073,2.23e-14,5;UBERON:0005086,2.23e-14,5;UBERON:0005284,4.37e-14,5;UBERON:0005085,3.56e-11,31;UBERON:0007625,3.65e-11,11;UBERON:0001778,8.47e-11,3;UBERON:0001775,8.47e-11,3;UBERON:0001282,4.52e-09,1;UBERON:0009842,4.52e-09,1;UBERON:0003704,4.52e-09,1;UBERON:0001171,4.52e-09,1;UBERON:0001172,4.52e-09,1;UBERON:0001136,5.28e-09,1;UBERON:0001343,5.28e-09,1;UBERON:0004910,5.28e-09,1;UBERON:0005154,5.28e-09,1;UBERON:0005295,5.28e-09,1;UBERON:0004813,5.28e-09,1;UBERON:0005297,5.28e-09,1;UBERON:0005294,5.28e-09,1;UBERON:0010141,5.28e-09,1;UBERON:0005891,5.28e-09,1;UBERON:0001801,8.44e-09,14;UBERON:0010077,1.22e-08,4;UBERON:0005389,1.22e-08,4;UBERON:0000484,1.22e-08,4;UBERON:0002546,1.22e-08,4;UBERON:0000965,1.22e-08,4;UBERON:0001803,1.22e-08,4;UBERON:0003073,1.22e-08,4;UBERON:0005426,1.22e-08,4;UBERON:0000488,2.58e-08,4;UBERON:0002067,3.32e-08,9;UBERON:0004016,3.32e-08,9;UBERON:0010083,3.32e-08,9;UBERON:0004121,6.76e-08,171;UBERON:0000924,6.76e-08,171;UBERON:0006601,6.76e-08,171;UBERON:0010314,5.05e-07,132 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,1.02000345622126,0.626909442956176,0.572471974262113,0.136874425072884,0.87879847716362,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,1.45990461090791,1.03988298880475,0.665188192387692,1.84453049955565,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,0.573673241497627,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,1.21085942115945,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0,0.516628905878827,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,1.05166641234618,0.113432183160021,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.686271241194102,0,0,0,0,0,0,0,1.27523445472584,10.5667824812239,0,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,3.05172048183296,0.4400297149257,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0.979005787313703,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.457847324091717,0.41254749960294,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,2.60510858551767,0.316379424718726,0.571890581771475,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0.143411352204052,0.785992328104969,0.7133421029625,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0.296964680832639,0,0,0.703347082052564,0.222617410045812,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0,2.39278317278703,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0.941798755221676,0,0,0,0,0,0,0,0.171986032471617,0,0,0.0821154570532092,0,0,0,0.274083849293502,0,0.253243183823515,0,2.96587634930675,0,0,0,0.229073192331831,0,0,0,0,0.815425236441684,0.313808538937,0.305994652908965,0,0,0.958337652243951,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0.26446520348538,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0.471162288750703,0.886068179966986,0,0.500763722825999,1.14681839138014,0,0.248385611765534,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0.310874401165561,0.443565449968902,0.159296767163702,0.449803112163605,0.310525913752519,0,0.53168342911599,0.521745061811734,0.300515217994437,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,1.26184898228651,0.192619830407303,0,0.260994291965212,0.226705925512272,0,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.691292180758654,0,0,0,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.615349092722265,0,0.207471757392654,0,0,0,0,0,0.462102664601353,1.1441462864015,0,0.596748666348824,0,0.80682027481408,0,0,0,0.739280431085226,0,0,1.2401207790071,0.19024743058172,0.546974809018219,0,0,0,0.894336993477167,0,0,0,0.227662191351298,0.0887023701626388,0,0.342976018874837,0.0679697329768317,0.263091094251396,0,0.222462803784138,0.156986185701028,0.628462359664008,0,0.913158720509496,0.215927591218621,0,0.285906176706625,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0.157771562193185,0,0.4363506903403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| |||
|short_description=p20@TGFB2 | |||
}} |
Revision as of 00:13, 11 January 2014
Short description: | p20@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TGFB2_5end |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | -231bp_to_uc001hll.2, uc001hlm.2, uc001hln.2, uc001hlo.2, uc010pue.1_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.45e-23 | 3 |
stem cell of epidermis | 1.45e-23 | 3 |
fibroblast of choroid plexus | 9.87e-16 | 2 |
hair follicle cell | 2.23e-14 | 5 |
ciliated cell | 8.47e-11 | 3 |
ciliated epithelial cell | 8.47e-11 | 3 |
multi-ciliated epithelial cell | 8.47e-11 | 3 |
non-pigmented ciliary epithelial cell | 8.47e-11 | 3 |
androgen binding protein secreting cell | 5.28e-09 | 1 |
seminiferous tubule epithelial cell | 5.28e-09 | 1 |
Sertoli cell | 5.28e-09 | 1 |
crystallin accumulating cell | 1.22e-08 | 4 |
vertebrate lens cell | 1.22e-08 | 4 |
lens epithelial cell | 1.22e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.65e-08 | 1 |