FFCP PHASE1:Hg19::chr21:36041286..36041333,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54102 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2065 | |||
|TSSclassifier=weak | |||
|UniProt=Q96NY7 | |||
|association_with_transcript=-354bp_to_ENST00000349499,ENST00000360731,NM_053277,uc002yuf.1,uc010gmt.1_5end | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_1_at_CLIC6_5end | |||
|id=chr21:36041286..36041333,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.28e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.21e-07;3!CL:0000136;8.07e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.22e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.71e-57!115;UBERON:0005743!1.46e-21!86;UBERON:0003075!9.50e-20!86;UBERON:0007284!9.50e-20!86;UBERON:0001049!4.92e-19!57;UBERON:0005068!4.92e-19!57;UBERON:0006241!4.92e-19!57;UBERON:0007135!4.92e-19!57;UBERON:0000073!5.66e-19!94;UBERON:0001016!5.66e-19!94;UBERON:0002346!3.95e-18!90;UBERON:0001017!4.11e-18!82;UBERON:0002616!4.76e-18!59;UBERON:0000955!2.09e-16!69;UBERON:0006238!2.09e-16!69;UBERON:0000153!9.03e-15!129;UBERON:0007811!9.03e-15!129;UBERON:0003080!8.75e-14!42;UBERON:0003056!3.21e-13!61;UBERON:0002780!5.53e-13!41;UBERON:0001890!5.53e-13!41;UBERON:0006240!5.53e-13!41;UBERON:0000033!5.60e-13!123;UBERON:0004121!3.55e-11!169;UBERON:0000924!1.69e-10!173;UBERON:0006601!1.69e-10!173;UBERON:0001893!9.63e-09!34;UBERON:0002020!1.01e-08!34;UBERON:0003528!1.01e-08!34;UBERON:0002298!2.15e-08!8;UBERON:0002791!2.65e-08!33;UBERON:0000475!9.58e-08!365;UBERON:0000468!9.93e-08!659;UBERON:0001869!1.35e-07!32;UBERON:0000064!1.74e-07!219;UBERON:0000062!2.64e-07!511;UBERON:0002619!4.88e-07!22;UBERON:0000922!6.18e-07!612;UBERON:0003135!7.40e-07!11;UBERON:0004732!7.49e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.62e-11;114!UBERON:0000966;1.13e-07;5!UBERON:0005388;1.13e-07;5!UBERON:0001802;1.13e-07;5!UBERON:0001781;1.21e-07;3!UBERON:0001782;1.21e-07;3!UBERON:0001896;1.46e-07;3!UBERON:0005290;1.46e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.65e-41,114;UBERON:0000966,3.34e-09,6;UBERON:0005388,3.34e-09,6;UBERON:0001802,3.34e-09,6;UBERON:0001781,3.65e-09,4;UBERON:0001782,1.22e-07,3;UBERON:0005424,1.22e-07,3;UBERON:0001896,1.47e-07,3;UBERON:0005290,1.47e-07,3;UBERON:0010096,1.47e-07,3;UBERON:0003075,1.67e-07,82;UBERON:0007284,1.67e-07,82;UBERON:0002346,6.98e-07,86 | |||
|phase1_expression=0.181678379270557,5.56661362116556,0.422863212287913,2.00146596706261,0.446961094427288,0.872338524100369,22.796989035148,0,14.626395179191,3.19454117451962,3.48900583986214,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0,0,0,1.45185470921107,1.39571002064908,1.8890587515283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,3.33146993609895,0.795285947051099,0.973269740605272,0.189069634328136,0,0.263504357079378,2.94702919869853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66493170409425,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.19276791489337,0.69716365721711,2.07322110030741,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39116485970092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76854665743776,5.33243827642757,4.92345490362882,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,2.35304930753057,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0,97.9639477944607,129.565785051384,136.008168969679,3.19427136107939,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.960950336825531,0.127612712494584,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,5.59801318031833,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4787524930142,0,0,0,0,0.296964680832639,0,1.9882952955326,0.281338832821026,0,0,0,2.19172787076177,4.97311047956066,0,0,0,0,0,0,0,1.87422470710174,0,0,5.81599647657131,1.11321717794222,1.99613798001194,0,0,4.34999745260876,0,0,0,0,0,0.173624994933292,2.65722415744152,2.41192877250816,0,0.221158519862449,1.18219047581419,15.3569778007781,0,0,5.2326175782582,0,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,1.22206028986725,0.296521128680622,0,0,20.7595489580485,1.60515529459758,1.87411556580271,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,1.70603764996917,0,0,0,0,0,0,0,0,0,0,0,8.38688007561745,0,0,0,0,1.74580229679155,0,24.8578814858586,0,0,0.189932387867636,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.67569440763353,5.27068975226872,1.43574604915363,6.58940701646671,5.57993862577542,10.7122299572099,0.335917362433631,0,0,0,0,0,1.47641222272123,0,0,11.3048827072608,0.482259445395058,0.825236619583403,0.83088067605837,0,0,0.242998226632099,0,0.630445658393585,0.786818822024972,0,0,0,0.714695326373367,4.63464379255802,0,0,0,0,0,0,0,0,0.439656701034247,0,2.45637617086946,0.79339561045614,0,0.704815022316672,13.2416391583941,45.4320441738035,6.21358583020793,0,0,0,0,5.98419583706421,3.5096585163178,7.04594826555962,0.655745261419609,0,0,0.122026264901963,0,166.862075945811,90.9618222602189,16.1450647647597,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,2.85538840518309,0,0,0,0,0,0,0,2.03067886542995,0,0.781514011233092,0,0,0,0.270150338473579,0,0.206686796501184,0.19024743058172,0.546974809018219,2.74128883428591,7.93937885422871,0,0,3.74991285114801,1.3451348888753,1.21393120847326,0.227662191351298,0.620916591138472,0,0.171488009437418,0.203909198930495,0.263091094251396,0,0,4.86657175673187,0,0,2.73947616152849,21.5927591218621,0,155.104100863344,0,0,0,0,0.207216164163037,0,0,0,0,0,2.9637093513365,0.22910686854405,0,0,0,0,0,3.23714418593947,2.77189578511867,0,0,0,0,0,0,0,0,1.08043821351123,0,0.470317296361523,2.45148321753905,0,0.785233868459781,0.594092800654172,0,0,0.845855261818682,0,0,0,0,0,98.5954124132798,1.37618785021362,0.143339583151451,0,3.33158301935482,0,3.7031878836078,0.371995018166751,23.1087814315709,0,0,1.31118686356435,0.633492505057185,0.101988829741982,6.94765253690457,0,1.50424523575425,2.04602485189246,0.535928260312357,0.829169439458779,0.724030971033267,4.69114760182158,5.95161078659351,2.71273421311226,2.48298857183432,0,12.0293129145732,2.42540626749863,1.08858373948481,0.342233301085281,1.48174516632093,10.1128309603674,6.65320713092027,0,0,0,0.0898252021065869,2.34640942403454,1.4668973301944,0.406896178315738,2.66302709674205,0.603821380773079,4.48795889224526 | |||
|short_description=p1@CLIC6 | |||
}} |
Revision as of 13:33, 21 January 2014
Short description: | p1@CLIC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLIC6_5end |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | -354bp_to_ENST00000349499, ENST00000360731, NM_053277, uc002yuf.1, uc010gmt.1_5end |
EntrezGene: | CLIC6 |
HGNC: | 2065 |
UniProt: | Q96NY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.65e-41 | 114 |
retina | 3.34e-09 | 6 |
photoreceptor array | 3.34e-09 | 6 |
posterior segment of eyeball | 3.34e-09 | 6 |
layer of retina | 3.65e-09 | 4 |
pigmented layer of retina | 1.22e-07 | 3 |
presumptive retinal pigmented epithelium | 1.22e-07 | 3 |
medulla oblongata | 1.47e-07 | 3 |
myelencephalon | 1.47e-07 | 3 |
future myelencephalon | 1.47e-07 | 3 |
neural plate | 1.67e-07 | 82 |
presumptive neural plate | 1.67e-07 | 82 |
neurectoderm | 6.98e-07 | 86 |