FFCP PHASE1:Hg19::chr22:32352552..32352569,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12853 | |||
|TSSclassifier=not | |||
|UniProt=Q9H4N8 | |||
|association_with_transcript=341bp_to_AY007132_5end | |||
|description=CAGE_peak_12_at_YWHAH_5end | |||
|id=chr22:32352552..32352569,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.60e-07;6!CL:0000404;9.60e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.74e-07,6;CL:0000031,8.74e-07,6;CL:0000404,8.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;9.60e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.86e-11!82;UBERON:0005743!1.30e-10!86;UBERON:0001049!1.64e-10!57;UBERON:0005068!1.64e-10!57;UBERON:0006241!1.64e-10!57;UBERON:0007135!1.64e-10!57;UBERON:0002619!3.02e-10!22;UBERON:0001893!4.42e-10!34;UBERON:0001869!5.61e-10!32;UBERON:0002791!1.10e-09!33;UBERON:0001950!1.94e-09!20;UBERON:0000956!2.51e-09!25;UBERON:0000203!2.51e-09!25;UBERON:0002020!3.97e-09!34;UBERON:0003528!3.97e-09!34;UBERON:0002616!1.34e-08!59;UBERON:0000073!1.82e-08!94;UBERON:0001016!1.82e-08!94;UBERON:0000955!2.46e-08!69;UBERON:0006238!2.46e-08!69;UBERON:0003080!2.99e-08!42;UBERON:0007023!6.12e-08!115;UBERON:0002780!7.84e-08!41;UBERON:0001890!7.84e-08!41;UBERON:0006240!7.84e-08!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.53e-21;20!UBERON:0002619;1.82e-19;22!UBERON:0000956;5.95e-17;25!UBERON:0000203;5.95e-17;25!UBERON:0001869;3.59e-12;32!UBERON:0002791;9.43e-12;32!UBERON:0001893;1.26e-10;34!UBERON:0003528;1.43e-10;34!UBERON:0002020;1.43e-10;34!UBERON:0002702;2.57e-09;2!UBERON:0001872;6.20e-08;5!UBERON:0000073;3.30e-07;53!UBERON:0002616;3.30e-07;53!UBERON:0000200;6.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.09e-22,20;UBERON:0002619,7.90e-20,22;UBERON:0000956,2.86e-17,25;UBERON:0000203,2.86e-17,25;UBERON:0001017,2.79e-15,81;UBERON:0001016,2.58e-13,89;UBERON:0002791,4.11e-13,32;UBERON:0001869,4.11e-13,32;UBERON:0003528,3.12e-12,34;UBERON:0002020,3.12e-12,34;UBERON:0001893,3.12e-12,34;UBERON:0001049,3.73e-11,56;UBERON:0005068,3.73e-11,56;UBERON:0006241,3.73e-11,56;UBERON:0007135,3.73e-11,56;UBERON:0000073,3.12e-10,53;UBERON:0002616,3.12e-10,53;UBERON:0000955,4.87e-10,68;UBERON:0006238,4.87e-10,68;UBERON:0002780,8.14e-10,41;UBERON:0001890,8.14e-10,41;UBERON:0003080,8.14e-10,41;UBERON:0006240,8.14e-10,41;UBERON:0002702,2.43e-09,2;UBERON:0001872,4.67e-08,5;UBERON:0007023,1.56e-07,114;UBERON:0000200,6.22e-07,6 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0.273748850145768,0.125542639594803,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,1.01778767145695,2.26725566213286,0.485168122375632,0.232429036905685,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0.941211697713023,0,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0.589211814949674,0.221533894583621,0,0.384273959177026,0,0.493313713811028,0.829050053357545,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0.434539556882471,0,0,0,0.665188192387692,0.087834785693126,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.835979866147242,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0.535798369704479,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0.808264032418128,0.163461903113459,0.302714855289863,0,0,0,0,0.298897361103602,0.352303495931295,0.809364721840658,0.421352420106746,0,1.10550885580591,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.453728732640084,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.292311015483596,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.169560592310488,0.386521706326594,0,0.286804595389004,0.487894824518382,0.662648841607426,0.813357600086629,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0.928735856063958,0,0.473227200159376,0.674338760312407,0.723033089650446,0.55146986366197,0.217879444092406,0,0.404493924480493,0.196221465125346,1.15424147083917,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0.858486162094873,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0.432359860250884,0.37872730027914,0.063497894292169,0.763976851116555,1.17217447210047,0,0.308482478109971,0.901029173531752,0.285826432630578,0,0.43596006883328,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.579125226670317,0.410952645100767,0,0,0,0.215627574859517,0,0.254094624222463,0,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0.24538298343828,0,0.271265023699736,1.03985430765404,1.24900292158013,0.473107245101804,0.234282829985426,0,4.5481500811197,0,0,0.184369168541703,0.434418072340414,0,0.686286847621712,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0.280660094433074,0.256278298511402,1.02341449813341,0,0,0.771048469013278,0.177561725313127,0.328508624055237,0.519254429183621,1.16210378459959,0.241718899183244,1.00253235151642,0.276242966807689,0.114814448164607,1.45672934405374,0.917870904715969,0,0.308061348417659,0,0,0.105551628892876,0,0.510281115829547,0.647747748306418,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.438519753291869,0.784306353074702,0.512900250232778,0,0,0,0,0,0,0.650060246036521,0,0,0,0.307007349452259,0.551346289938122,0.107420244868274,0.435050081742686,0,0.178064071293475,0,0.384380134730212,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0.255897791311334,0,0,0,0,0,0.589062011728432,0.202182481573316,0,0.421258456238981,0,0,0,0.272999822815972,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0,0.35667105148125,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0.245040215981032,0.371606350251437,0.144269212976445,0.497992903438899,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0.47003968731907,0,0.169291777801603,0.642352300414798,0,0,0.343505344755765,0,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0.439524537815682,0,0.222886768554957,0,0.23874448473769,0,0,1.9882952955326,0.703347082052564,0.222617410045812,0.16480387422676,0,0.597743964753209,0,0,0.20453736500431,0,0.622079175323615,0,0.179021174675609,0.511572370226872,0.493217028184668,0,0,3.87733098438087,1.76259386507517,0,0.260427761085233,0,0.724999575434793,0,0.254253650292766,0.236387681767936,0,0.291604613383254,0.173624994933292,0.885741385813839,0.361789315876224,1.52581736317083,0.110579259931225,2.06883333267483,2.4132393686937,0,0.139423744278603,0.307801034015188,0.113942055847001,0.46112780877612,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,1.68798451622422,0,0,0.216388639742091,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,0,0.937057782901357,0.729819156862664,0,0,0,0,0.91821828489147,0.189559738885464,0,0.311064574191741,0,0.661983911750998,0.313932918407225,0,0,0.416024019039416,0.694238953340524,0,0,0,0.171986032471617,0,0.146178634172371,0.0821154570532092,0.290967049465258,0.0882561266915003,0.451961481561065,0.137041924646751,0,0.50648636764703,0,0,1.06726497369676,0.19980960958213,0.288180834308212,0,0.857974989309823,0.14405479798815,0,0.471388069233591,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,1.28767814440971,0,0,0,0,0.157566364614447,0.247247575143499,0,0,0.0846733320657845,0.795229689809303,0.408610218334727,1.28602518772015,0.687697182986169,4.98528405635022,0.899895566206002,0.77380195455795,1.09349201984444,0.670869375198532,0.157611414598396,0,0,0.537862017998534,0,0,0,0,0,0,0.653174720218818,0,0.164185041498678,0.340776043570843,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,2.65820453990096,4.51497180137264,1.251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0.553394539744923,0,0.151649117541648,0,0.705797459094515,0,0.144921028610825,0.298509605773748,0,0,0.378806010550178,0.754703705257725,0,0,0,0.466311601748341,0.295710299979268,0.796483835818512,0,0,0,1.59505028734797,1.04349012362347,0,0,0.406870733204662,0,0.322231671127465,0,0.398095888698616,3.20022211730523,0,0,0,0.192619830407303,0,0,0.680117776536817,0,0.244736704506468,0,0.308801447160972,0,0.530067437837643,0,0.337884881306145,0.76872455576384,0.345430341731199,0,0.138258436151731,0.389720617678777,0.132864840313363,0.163565394255844,0.327609848846413,0.245772908753719,0,0,0.533458648470704,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0.513833800771676,0,0.159633859057151,11.8967491259638,1.76450187355203,0.760729777106397,1.29180516505481,0,0,0,0.183428598521679,0.231051332300676,0.381382095467167,0,0,0.150420656698515,0.40341013740704,0,0,1.14640342257068,0.147856086217045,0.540300676947157,1.56215619722769,1.2401207790071,0.253663240775627,2.7348740450911,0,1.48863353516788,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0.543757863814654,0.920818829879887,0.118193840883968,0.222462803784138,0.313972371402056,0.785577949580009,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0.4582137370881,0,0.955538938977433,0.111855431797792,0,0,0,0.102662806856247,1.1598144313382,1.45713297917742,0,0.397901550322736,0.118920090777569,0,0.109940516745429,0,0.154348316215889,0,0.470317296361523,0.245148321753905,0,1.17785080268967,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0.430018749454354,0,1.49581278420012,3.05445483238264,0,0.371995018166751,0,0.432626562123789,0.126166424835079,0.218531143927391,0,0.101988829741982,0,0,0.50141507858475,0.454672189309436,0,0,0.20686599172379,0.639701945702943,0,0.193766729508018,0.0620747142958579,0,0.190941474834495,0,0.217716747896961,0.342233301085281,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p12@YWHAH | |||
}} |
Revision as of 15:27, 21 January 2014
Short description: | p12@YWHAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_YWHAH_5end |
Coexpression cluster: | NA |
Association with transcript: | 341bp_to_AY007132_5end |
EntrezGene: | YWHAH |
HGNC: | 12853 |
UniProt: | Q9H4N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.74e-07 | 6 |
neuroblast | 8.74e-07 | 6 |
electrically signaling cell | 8.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 6.09e-22 | 20 |
regional part of cerebral cortex | 7.90e-20 | 22 |
cerebral cortex | 2.86e-17 | 25 |
pallium | 2.86e-17 | 25 |
central nervous system | 2.79e-15 | 81 |
nervous system | 2.58e-13 | 89 |
regional part of telencephalon | 4.11e-13 | 32 |
cerebral hemisphere | 4.11e-13 | 32 |
brain grey matter | 3.12e-12 | 34 |
gray matter | 3.12e-12 | 34 |
telencephalon | 3.12e-12 | 34 |
neural tube | 3.73e-11 | 56 |
neural rod | 3.73e-11 | 56 |
future spinal cord | 3.73e-11 | 56 |
neural keel | 3.73e-11 | 56 |
regional part of nervous system | 3.12e-10 | 53 |
regional part of brain | 3.12e-10 | 53 |
brain | 4.87e-10 | 68 |
future brain | 4.87e-10 | 68 |
regional part of forebrain | 8.14e-10 | 41 |
forebrain | 8.14e-10 | 41 |
anterior neural tube | 8.14e-10 | 41 |
future forebrain | 8.14e-10 | 41 |
middle frontal gyrus | 2.43e-09 | 2 |
parietal lobe | 4.67e-08 | 5 |
adult organism | 1.56e-07 | 114 |
gyrus | 6.22e-07 | 6 |