FFCP PHASE1:Hg19::chr2:171034646..171034706,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140469 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15576 | |||
|TSSclassifier=weak | |||
|UniProt=Q8WXR4,B7ZM71 | |||
|association_with_transcript=0bp_to_ENST00000317915,ENST00000317935,ENST00000408978,ENST00000409044,ENST00000409940,ENST00000438642,NM_001083615,NM_001171642,NM_138995,uc002ufv.2,uc002ufw.2,uc002ufx.2,uc002ufy.2,uc002ufz.2,uc010fqb.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_MYO3B_5end | |||
|id=chr2:171034646..171034706,+ | |||
|ontology_enrichment_celltype=CL:0000625!2.37e-23!11;CL:0000838!2.27e-20!52;CL:0000542!7.69e-20!53;CL:0000051!7.69e-20!53;CL:0000084!8.38e-17!25;CL:0000827!8.38e-17!25;CL:0000791!4.08e-13!18;CL:0000789!4.08e-13!18;CL:0002420!4.08e-13!18;CL:0002419!4.08e-13!18;CL:0000790!4.08e-13!18;CL:0002087!5.88e-09!119;CL:0000080!3.09e-08!6;CL:0000738!9.21e-08!140;CL:0000623!2.19e-07!3;CL:0000825!2.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.50e-44;11!CL:0000791;7.16e-27;18!CL:0000789;7.16e-27;18!CL:0002419;7.16e-27;18!CL:0000084;3.36e-24;25!CL:0000542;1.64e-16;53!CL:0000623;1.64e-11;3!CL:0000946;4.32e-09;1!CL:0000786;4.32e-09;1!CL:0000945;2.82e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.06e-44,11;CL:0000838,3.75e-36,52;CL:0000542,2.03e-35,53;CL:0000051,2.03e-35,53;CL:0000791,5.81e-27,18;CL:0000789,5.81e-27,18;CL:0002420,5.81e-27,18;CL:0002419,5.81e-27,18;CL:0000790,5.81e-27,18;CL:0000084,2.88e-24,25;CL:0000827,2.88e-24,25;CL:0002087,1.22e-14,115;CL:0002031,6.45e-14,120;CL:0000738,5.92e-12,136;CL:0000623,1.59e-11,3;CL:0000825,1.59e-11,3;CL:0002032,1.16e-09,161;CL:0000837,1.16e-09,161;CL:0000037,3.83e-09,168;CL:0000946,5.72e-09,1;CL:0000786,5.72e-09,1;CL:0000980,5.72e-09,1;CL:0000988,1.55e-08,177;CL:0000945,2.93e-08,24;CL:0000826,2.93e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000790;7.16e-27;18!CL:0000051;1.64e-16;53!UBERON:0003056;5.88e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;2.55e-09;1!DOID:0050177;2.55e-09;1!DOID:0050427;2.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.35e-09,1;DOID:0050177,2.35e-09,1;DOID:0050427,2.35e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.42e-10!115;UBERON:0002298!3.79e-08!8;UBERON:0000178!1.60e-07!15;UBERON:0000179!1.60e-07!15;UBERON:0000463!1.60e-07!15;UBERON:0003075!9.19e-07!86;UBERON:0007284!9.19e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.68e-18;2!UBERON:0002757;7.68e-18;2!UBERON:0010134;7.68e-18;2!UBERON:0005408;7.68e-18;2!UBERON:0001899;7.68e-18;2!UBERON:0003296;2.26e-09;4!UBERON:0010133;2.26e-09;4!UBERON:0002784;2.26e-09;4!UBERON:0000966;1.63e-07;5!UBERON:0005388;1.63e-07;5!UBERON:0001802;1.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.68e-18,2;UBERON:0002757,7.68e-18,2;UBERON:0010134,7.68e-18,2;UBERON:0005408,7.68e-18,2;UBERON:0001899,7.68e-18,2;UBERON:0003296,2.26e-09,4;UBERON:0010133,2.26e-09,4;UBERON:0002784,2.26e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.93374274723366,8.70266248169425,8.65818594450472,0,0.767658796194425,0,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,1.77113784413652,0.95569624297229,1.95325036156926,0.950452044448374,1.80690142893327,2.04778577847069,1.24930726552346,1.89421801635213,2.46338399076314,2.01606743224732,5.34880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,1.77327684181734,3.23441362289276,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.411362273086194,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23484860254418,0,0,0,0,0,0,0,0.329607748453519,0,0.19924798825107,0,0,0,0.984678443688556,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,10.169133335124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.332787154610557,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.5346560496544,142.584298220781,0,0.227662191351298,0,1.03710588800201,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,13.1516841285048,4.58239474024907,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.4297298366555,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,2.02717601618299,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | |||
|short_description=p1@MYO3B | |||
}} |
Revision as of 06:32, 21 January 2014
Short description: | p1@MYO3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO3B_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000317915, ENST00000317935, ENST00000408978, ENST00000409044, ENST00000409940, ENST00000438642, NM_001083615, NM_001171642, NM_138995, uc002ufv.2, uc002ufw.2, uc002ufx.2, uc002ufy.2, uc002ufz.2, uc010fqb.1_5end |
EntrezGene: | MYO3B |
HGNC: | 15576 |
UniProt: | Q8WXR4B7ZM71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.06e-44 | 11 |
lymphoid lineage restricted progenitor cell | 3.75e-36 | 52 |
lymphocyte | 2.03e-35 | 53 |
common lymphoid progenitor | 2.03e-35 | 53 |
mature alpha-beta T cell | 5.81e-27 | 18 |
alpha-beta T cell | 5.81e-27 | 18 |
immature T cell | 5.81e-27 | 18 |
mature T cell | 5.81e-27 | 18 |
immature alpha-beta T cell | 5.81e-27 | 18 |
T cell | 2.88e-24 | 25 |
pro-T cell | 2.88e-24 | 25 |
nongranular leukocyte | 1.22e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 6.45e-14 | 120 |
leukocyte | 5.92e-12 | 136 |
natural killer cell | 1.59e-11 | 3 |
pro-NK cell | 1.59e-11 | 3 |
hematopoietic oligopotent progenitor cell | 1.16e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-09 | 161 |
hematopoietic stem cell | 3.83e-09 | 168 |
antibody secreting cell | 5.72e-09 | 1 |
plasma cell | 5.72e-09 | 1 |
plasmablast | 5.72e-09 | 1 |
hematopoietic cell | 1.55e-08 | 177 |
lymphocyte of B lineage | 2.93e-08 | 24 |
pro-B cell | 2.93e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.68e-18 | 2 |
regional part of epithalamus | 7.68e-18 | 2 |
secretory circumventricular organ | 7.68e-18 | 2 |
circumventricular organ | 7.68e-18 | 2 |
epithalamus | 7.68e-18 | 2 |
gland of diencephalon | 2.26e-09 | 4 |
neuroendocrine gland | 2.26e-09 | 4 |
regional part of diencephalon | 2.26e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.35e-09 | 1 |
monogenic disease | 2.35e-09 | 1 |
xeroderma pigmentosum | 2.35e-09 | 1 |