FFCP PHASE1:Hg19::chr2:172471358..172471362,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:172471358..172471362,- | |||
|id=chr2:172471358..172471362,- | |||
|ontology_enrichment_celltype=CL:0000680!4.58e-15!57;CL:0000056!4.58e-15!57;CL:0000355!4.58e-15!57;CL:0000055!5.00e-15!180;CL:0000183!3.62e-14!59;CL:0000187!6.21e-13!54;CL:0000393!1.19e-11!60;CL:0000211!1.19e-11!60;CL:0000220!1.69e-09!246;CL:0000188!1.75e-09!9;CL:0002321!3.00e-09!248;CL:0000222!2.06e-08!119;CL:0000192!2.32e-08!42;CL:0000514!2.32e-08!42;CL:0000144!1.11e-07!625;CL:0000012!3.29e-07!682;CL:0000548!5.76e-07!679;CL:0000004!5.76e-07!679;CL:0000255!5.76e-07!679;CL:0002371!6.00e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000056;1.20e-12;4!CL:0002575;1.89e-11;2!CL:0000187;9.59e-11;55!CL:0000359;5.02e-09;32!CL:0000192;5.48e-09;43!CL:0000515;3.60e-08;3!CL:0000346;6.46e-08;3!CL:1000428;6.46e-08;3!CL:0000680;2.02e-07;7!CL:0000037;6.06e-07;1!CL:0001024;6.06e-07;1!CL:0002599;6.06e-07;1!CL:0000393;7.41e-07;61!CL:0000211;7.41e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.08e-20,58;CL:0000056,5.08e-20,58;CL:0000355,5.08e-20,58;CL:0000187,5.02e-16,55;CL:0000393,3.69e-14,61;CL:0000211,3.69e-14,61;CL:0000192,7.42e-13,43;CL:0000514,7.42e-13,43;CL:0000515,1.31e-12,4;CL:0002575,2.11e-11,2;CL:0000222,2.71e-10,121;CL:0000359,1.66e-09,32;CL:0000346,3.08e-08,3;CL:1000428,3.08e-08,3;CL:0002321,8.59e-08,250;CL:0002599,5.43e-07,1;CL:0001024,6.43e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000355;1.12e-13;58!CL:0000515;1.20e-12;4!CL:0000514;5.48e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;4.84e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000486!7.20e-20!82;UBERON:0000914!4.47e-19!83;UBERON:0002329!4.47e-19!83;UBERON:0003077!4.47e-19!83;UBERON:0003059!4.47e-19!83;UBERON:0007282!4.47e-19!83;UBERON:0009618!4.47e-19!83;UBERON:0007285!4.47e-19!83;UBERON:0004290!1.37e-18!70;UBERON:0001134!2.37e-15!61;UBERON:0002036!2.37e-15!61;UBERON:0003082!2.37e-15!61;UBERON:0002385!1.79e-14!63;UBERON:0001015!1.79e-14!63;UBERON:0000383!1.79e-14!63;UBERON:0005256!3.40e-10!143;UBERON:0000490!1.15e-07!138;UBERON:0002100!2.34e-07!216;UBERON:0003104!2.71e-07!238;UBERON:0009142!2.71e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.21e-12;31!UBERON:0001015;2.21e-12;31!UBERON:0000383;2.21e-12;31!UBERON:0001134;1.46e-11;16!UBERON:0002036;1.46e-11;16!UBERON:0000412;6.46e-08;3!UBERON:0001992;6.46e-08;3!UBERON:0007195;4.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.36e-25,71;UBERON:0003059,1.36e-25,71;UBERON:0007282,1.36e-25,71;UBERON:0004290,1.36e-25,71;UBERON:0009618,1.36e-25,71;UBERON:0003077,3.55e-25,72;UBERON:0007285,3.55e-25,72;UBERON:0007524,9.04e-25,73;UBERON:0000486,1.35e-23,83;UBERON:0007503,6.75e-23,78;UBERON:0001134,5.08e-21,62;UBERON:0002036,5.08e-21,62;UBERON:0003082,5.08e-21,62;UBERON:0002385,3.02e-20,64;UBERON:0001015,3.02e-20,64;UBERON:0000383,3.02e-20,64;UBERON:0005256,1.13e-14,122;UBERON:0000490,2.72e-11,148;UBERON:0003104,4.17e-10,160;UBERON:0009142,4.17e-10,160;UBERON:0000412,3.08e-08,3;UBERON:0001992,3.08e-08,3;UBERON:0002100,3.56e-08,199;UBERON:0002204,2.51e-07,167;UBERON:0007195,5.13e-07,1 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0,0,0,0,0,0.861847406537515,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0.284338464974843,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0.352303495931295,1.61872944368132,0.702254033511242,0.204154171254893,0.245668634623536,0,0,0,0,0,0.841680569770331,0,0,0.438977620880838,0.30648779579902,0,0.453728732640084,0,0.213557388818567,0,0,0.412210116953756,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0.57978255948989,0.545492241181669,1.14721838155602,0,0,0,0,0,0,1.56449532329816,1.92972281457866,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0.658501712451753,1.1240175325762,0.100528972411631,0.185176890317059,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.646358578788889,0,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,1.42636905040718,1.15825045334063,0.205476322550383,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0,0.260650843404249,1.17480694477644,1.37257369524342,0,0,0,0.909382714338778,0,0,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.616838775210622,0.177561725313127,0.821271560138091,1.55776328755086,0.697262270759755,0,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0.650756789328606,0.103041011647722,0,0,0.574265537996172,0,0,1.25671933779759,0.308097234229289,0.767518373630648,4.41077031950498,0.429680979473094,0.580066775656914,0.0852266274161009,0.534192213880424,0,0,0.638063562472921,0,0,0,0,0.308033580176089,2.12922412126809,1.73986598415015,1.48259375283136,0.286249773483982,1.116475108079,0.316379424718726,0.38126038784765,0.255897791311334,0,0,1.56989728039846,1.2591072030832,0.274537029736055,0,3.63928466831969,0,0.421258456238981,2.92580243453754,0,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0,0,1.01455188481352,0.30982349809975,0,1.57752487424457,0.0982490410131212,0,1.06428319221179,0,0.329294892959902,0.75894634753143,0.699869440489966,0.673554789078584,1.34060455107157,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.779160935160341,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0.183195186803725,0,0,0.627921025580099,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0,0.435296032902013,0,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0.271808412147228,1.255234155748,0.101998217636322,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.597019211547496,0,0.554805861502613,0,0,0,0,0,0.466311601748341,0.591420599958536,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,1.20206087197775,1.90402606084398,2.03435366602331,0,0.429642228169954,0,0.398095888698616,4.80033317595784,0.343395705182793,0,0,0,0,0.260994291965212,1.36023555307363,0.231522474323834,0.489473409012935,0.179088841081487,0.308801447160972,0,0,0,1.52048196587765,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,3.60124819818579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0.33639558774184,0,0,0,0.342233301085281,0,0.071722205392676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| |||
|short_description=p@chr2:172471358..172471362,- | |||
}} |
Revision as of 06:35, 21 January 2014
Short description: | p@chr2:172471358..172471362, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:172471358..172471362, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.08e-20 | 58 |
myoblast | 5.08e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.08e-20 | 58 |
muscle cell | 5.02e-16 | 55 |
electrically responsive cell | 3.69e-14 | 61 |
electrically active cell | 3.69e-14 | 61 |
smooth muscle cell | 7.42e-13 | 43 |
smooth muscle myoblast | 7.42e-13 | 43 |
skeletal muscle myoblast | 1.31e-12 | 4 |
central nervous system pericyte | 2.11e-11 | 2 |
mesodermal cell | 2.71e-10 | 121 |
vascular associated smooth muscle cell | 1.66e-09 | 32 |
hair follicle dermal papilla cell | 3.08e-08 | 3 |
stem cell of epidermis | 3.08e-08 | 3 |
embryonic cell | 8.59e-08 | 250 |
smooth muscle cell of the esophagus | 5.43e-07 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somite | 1.36e-25 | 71 |
presomitic mesoderm | 1.36e-25 | 71 |
presumptive segmental plate | 1.36e-25 | 71 |
dermomyotome | 1.36e-25 | 71 |
trunk paraxial mesoderm | 1.36e-25 | 71 |
paraxial mesoderm | 3.55e-25 | 72 |
presumptive paraxial mesoderm | 3.55e-25 | 72 |
dense mesenchyme tissue | 9.04e-25 | 73 |
multilaminar epithelium | 1.35e-23 | 83 |
epithelial vesicle | 6.75e-23 | 78 |
skeletal muscle tissue | 5.08e-21 | 62 |
striated muscle tissue | 5.08e-21 | 62 |
myotome | 5.08e-21 | 62 |
muscle tissue | 3.02e-20 | 64 |
musculature | 3.02e-20 | 64 |
musculature of body | 3.02e-20 | 64 |
trunk mesenchyme | 1.13e-14 | 122 |
unilaminar epithelium | 2.72e-11 | 148 |
mesenchyme | 4.17e-10 | 160 |
entire embryonic mesenchyme | 4.17e-10 | 160 |
dermal papilla | 3.08e-08 | 3 |
papillary layer of dermis | 3.08e-08 | 3 |
trunk | 3.56e-08 | 199 |
musculoskeletal system | 2.51e-07 | 167 |
stroma of bone marrow | 5.13e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 4.85e-07 | 1 |