FFCP PHASE1:Hg19::chr2:192542850..192542872,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26232 | |||
|TSSclassifier=strong | |||
|UniProt=F8WAF5,Q96AH0 | |||
|association_with_transcript=0bp_to_ENST00000307834,ENST00000307849,ENST00000410026,ENST00000451500,ENST00000462712,NM_001031716,NR_045623,uc002usx.2,uc002usy.2,uc002usz.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_OBFC2A_5end | |||
|id=chr2:192542850..192542872,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.08e-26!76;CL:0000048!1.90e-25!430;CL:0000723!8.76e-24!436;CL:0000557!8.84e-24!71;CL:0002057!3.53e-23!42;CL:0002009!1.66e-22!65;CL:0002194!2.39e-21!63;CL:0000576!2.39e-21!63;CL:0000040!2.39e-21!63;CL:0000559!2.39e-21!63;CL:0000034!4.49e-21!444;CL:0000839!4.82e-21!70;CL:0000134!6.34e-21!358;CL:0000003!7.97e-21!722;CL:0000763!4.52e-20!112;CL:0000049!4.52e-20!112;CL:0002320!4.98e-20!365;CL:0000738!9.13e-20!140;CL:0000860!2.55e-19!45;CL:0000144!1.31e-18!625;CL:0002371!4.81e-18!591;CL:0000548!2.56e-17!679;CL:0000004!2.56e-17!679;CL:0000255!2.56e-17!679;CL:0000012!4.98e-17!682;CL:0002032!2.21e-16!165;CL:0000837!2.21e-16!165;CL:0002031!9.11e-16!124;CL:0000037!4.04e-15!172;CL:0000566!4.04e-15!172;CL:0000219!1.55e-14!390;CL:0002087!1.74e-14!119;CL:0000988!5.79e-14!182;CL:0000063!1.30e-12!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-19;33!CL:0002057;3.02e-19;33!CL:0000473;7.97e-19;39!CL:0000234;7.97e-19;39!CL:0000576;9.69e-14;48!CL:0000766;2.75e-13;69!CL:0000763;8.69e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.96e-29,72;CL:0000557,1.45e-26,67;CL:0000048,1.55e-26,427;CL:0000473,2.14e-26,48;CL:0000234,2.14e-26,48;CL:0002009,2.28e-25,61;CL:0000723,7.86e-25,433;CL:0002194,3.63e-24,59;CL:0000576,3.63e-24,59;CL:0000040,3.63e-24,59;CL:0000559,3.63e-24,59;CL:0000839,1.31e-23,66;CL:0000860,3.53e-23,42;CL:0002057,3.53e-23,42;CL:0000034,4.74e-22,441;CL:0000134,5.04e-22,354;CL:0000763,8.06e-22,108;CL:0000049,8.06e-22,108;CL:0000738,3.02e-21,136;CL:0002320,4.30e-21,361;CL:0002032,1.50e-17,161;CL:0000837,1.50e-17,161;CL:0002031,3.85e-17,120;CL:0000037,3.38e-16,168;CL:0002087,8.10e-16,115;CL:0000219,2.11e-15,386;CL:0000988,6.95e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.16e-17;42!CL:0000049;2.62e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.97e-26!102;UBERON:0003061!3.97e-26!102;UBERON:0002193!5.44e-25!112;UBERON:0002204!1.75e-22!167;UBERON:0002371!1.85e-22!80;UBERON:0001474!2.05e-20!86;UBERON:0002384!6.60e-20!375;UBERON:0004765!5.15e-19!101;UBERON:0001434!5.15e-19!101;UBERON:0003081!4.52e-15!216;UBERON:0002405!2.81e-14!115;UBERON:0000926!8.42e-08!448;UBERON:0004120!8.42e-08!448;UBERON:0006603!8.42e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.16e-28,98;UBERON:0003061,2.16e-28,98;UBERON:0002193,4.88e-27,108;UBERON:0002371,6.83e-25,76;UBERON:0002405,2.80e-23,93;UBERON:0002204,7.45e-23,167;UBERON:0001474,1.47e-22,82;UBERON:0004765,3.55e-21,90;UBERON:0002384,5.89e-21,371;UBERON:0001434,1.24e-19,100;UBERON:0003081,2.86e-16,203;UBERON:0000926,2.11e-15,315;UBERON:0004120,2.11e-15,315;UBERON:0006603,2.11e-15,315 | |||
|phase1_expression=92.4742950487133,67.0134639778777,70.1952932397936,129.094554875538,92.5209465464486,64.5530507834273,25.3299878168311,20.8467558230854,27.424490960983,50.3754569828093,63.4999062854909,17.4753097704138,15.8260186937072,32.7980835344124,65.6166803941273,116.312250336157,104.266153348148,122.692095185079,101.490022148425,16.9907060145967,27.3360926267299,14.7323719094701,24.0438229190088,18.7517962349851,21.9699619290905,23.3825021588731,23.5628691721344,22.9048373622807,66.4785627874648,33.3931576344575,43.5033306518174,45.0516399994674,48.19294700452,48.807529342016,8.75379366557408,36.2531542842925,18.4968276780954,65.3714582067615,59.1606120036918,109.590489711505,83.2965564172518,110.447740112472,110.499918515066,180.875409041779,241.462728017149,206.924204193207,334.46538410728,353.60438369877,365.763224027117,500.872455032864,326.861061531132,372.223029844633,514.705301339771,373.735631795035,343.983275949628,240.008982916821,283.549489910102,273.039033600778,532.279888833,377.412535841486,530.010477287405,302.143790971032,261.696318799581,317.96366389739,346.800040161158,361.991773352947,366.842304658394,495.462367886298,423.444129757204,381.383611302185,303.910550321951,287.624833706288,325.63979667667,62.9540753209587,77.1753608873108,83.8634582033504,89.0766044991706,81.0955221344134,70.8799837334123,88.3539505597871,65.4435867985006,82.7468616553792,19.3595868907455,31.6760394532036,27.5747868697702,31.5780364699215,19.2190073777286,32.1861366374511,29.7470192753188,36.2540426723438,37.5680559612236,19.378827249241,18.349114950011,13.2171328579026,53.2483134832459,10.7987474757782,28.326206896392,39.6940870376656,58.1852242168611,76.2370418981492,54.103096261176,55.3933932709638,74.0341567950063,79.2128348453584,108.120368043265,98.5825830897114,142.442832340398,94.5313939575483,94.9433237187111,76.4636256407094,67.9821043753187,47.2379029748136,25.6535754270365,17.9252354820108,35.5420780936921,57.7877647757588,57.4830740402882,62.196567632356,63.2549230048757,34.4050647470024,33.2052561466773,44.6712460890736,36.1380285786655,38.6519565686344,49.9722906209383,50.1967774333316,46.8042958244997,31.652258686283,41.1857901506601,41.1301307027149,214.550042356286,21.4624275105164,12.4026684988224,43.7341374385325,15.5414752297126,48.0890442949935,6.36228757640879,16.058950719987,25.5244006342983,45.4545264798256,33.1137142063085,24.3621080425746,18.5790597029197,12.977455497455,141.827211027097,167.861066756494,185.07748104226,9.53962497221368,18.8758320557442,16.7155875598304,12.3232692567357,29.2479762336082,21.5227110996708,14.1326985481002,21.8139706829151,22.8347974810256,22.3624614194387,21.190174251885,41.9804189970318,27.7818108594676,25.7810762949854,34.9725168630516,21.2333990066907,43.0165804004666,27.5448262279798,19.8245396790657,27.8416422056451,28.3780930817972,36.795992991812,26.5794384679076,18.3201743930407,1593.225246802,1438.66477999029,22.6768907114118,44.7274756525787,33.4304550794491,505.803070706496,112.153118712786,36.8855117486291,24.1091368061192,28.8222288470203,22.6934144543787,70.3336940003472,29.6363478553314,34.1635377507129,19.827823021486,13.82822218752,27.4156075245542,44.6388909867358,26.8121756125891,29.8897361103602,43.450764498193,39.6588713701922,42.2756928173768,49.6094636149391,21.6188398468712,24.3848843574806,30.8880742893334,46.4861827043687,33.675970391707,51.0218880689529,23.9037281814774,20.0189631795143,78.6862087975079,134.327151989536,76.6219489497549,41.9164184349405,11.6835148654822,137.591850573357,87.3449720267941,98.1244702368771,135.64117543015,85.945809384858,199.156137455271,71.8411065439937,213.839612949684,88.4728006863684,198.917814104362,70.6022722586436,131.90318236415,166.499498890292,68.8136830894783,48.1552082161785,32.6610841845972,49.9125400681227,59.6553558409128,2.80539524098069,1.85541675650079,4.18298194330266,6.94529068602982,4.03713361401005,1.82488679537915,86.0472427813988,39.237697229766,53.8726193274674,108.662095159483,112.613199140455,15.9714180053789,19.2186546689036,18.7988603309116,19.4117392009013,15.9051994187456,22.7779794346653,15.3707691302587,17.8561533264065,18.8526106903731,18.4538863656162,28.0483547606892,16.0513864419246,7.3504355692771,17.7457048750563,17.6908899001973,31.9026549607958,14.1268191812688,20.6620576752431,39.8037319892579,26.0108176418443,34.8445435098621,15.9841066134493,14.0734436640965,16.2904152655162,30.1581087731078,31.7528952455601,4.75314660397815,27.5910431454181,22.3767994029664,31.4830148552095,34.8165098589315,11.0628615714299,11.1603201072333,131.233664244583,212.007864216149,183.856747751157,34.6815185751075,44.3472818444989,49.90483422932,64.3925778233479,44.4669925926362,23.0029607499127,104.937269671836,73.1682486649908,67.1743094352101,69.1775776401415,78.6490360246347,13.4615535899398,18.7174328523556,15.2382681373061,20.5286935227246,10.5912317484423,11.4130361980689,18.8645445536182,21.4170371099639,17.8743628221645,18.4812480268794,41.88403590552,153.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| |||
|short_description=p1@OBFC2A | |||
}} |
Revision as of 07:38, 21 January 2014
Short description: | p1@OBFC2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OBFC2A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000307834, ENST00000307849, ENST00000410026, ENST00000451500, ENST00000462712, NM_001031716, NR_045623, uc002usx.2, uc002usy.2, uc002usz.2_5end |
EntrezGene: | OBFC2A |
HGNC: | 26232 |
UniProt: | F8WAF5Q96AH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.96e-29 | 72 |
granulocyte monocyte progenitor cell | 1.45e-26 | 67 |
multi fate stem cell | 1.55e-26 | 427 |
defensive cell | 2.14e-26 | 48 |
phagocyte | 2.14e-26 | 48 |
macrophage dendritic cell progenitor | 2.28e-25 | 61 |
somatic stem cell | 7.86e-25 | 433 |
monopoietic cell | 3.63e-24 | 59 |
monocyte | 3.63e-24 | 59 |
monoblast | 3.63e-24 | 59 |
promonocyte | 3.63e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.31e-23 | 66 |
classical monocyte | 3.53e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-23 | 42 |
stem cell | 4.74e-22 | 441 |
mesenchymal cell | 5.04e-22 | 354 |
myeloid cell | 8.06e-22 | 108 |
common myeloid progenitor | 8.06e-22 | 108 |
leukocyte | 3.02e-21 | 136 |
connective tissue cell | 4.30e-21 | 361 |
hematopoietic oligopotent progenitor cell | 1.50e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 3.85e-17 | 120 |
hematopoietic stem cell | 3.38e-16 | 168 |
nongranular leukocyte | 8.10e-16 | 115 |
motile cell | 2.11e-15 | 386 |
hematopoietic cell | 6.95e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.16e-28 | 98 |
blood island | 2.16e-28 | 98 |
hemolymphoid system | 4.88e-27 | 108 |
bone marrow | 6.83e-25 | 76 |
immune system | 2.80e-23 | 93 |
musculoskeletal system | 7.45e-23 | 167 |
bone element | 1.47e-22 | 82 |
skeletal element | 3.55e-21 | 90 |
connective tissue | 5.89e-21 | 371 |
skeletal system | 1.24e-19 | 100 |
lateral plate mesoderm | 2.86e-16 | 203 |
mesoderm | 2.11e-15 | 315 |
mesoderm-derived structure | 2.11e-15 | 315 |
presumptive mesoderm | 2.11e-15 | 315 |