FFCP PHASE1:Hg19::chr2:39893370..39893381,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130733 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28517 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=257bp_to_DQ890996_5end | |||
|description=CAGE_peak_22_at_TMEM178_5end | |||
|id=chr2:39893370..39893381,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;8.69e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,9.46e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.35e-66;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.45e-60!57;UBERON:0005068!5.45e-60!57;UBERON:0006241!5.45e-60!57;UBERON:0007135!5.45e-60!57;UBERON:0000955!4.41e-51!69;UBERON:0006238!4.41e-51!69;UBERON:0001017!5.97e-51!82;UBERON:0002616!3.70e-50!59;UBERON:0005743!3.10e-48!86;UBERON:0000073!6.05e-43!94;UBERON:0001016!6.05e-43!94;UBERON:0003075!1.66e-42!86;UBERON:0007284!1.66e-42!86;UBERON:0002346!2.87e-40!90;UBERON:0002780!1.47e-38!41;UBERON:0001890!1.47e-38!41;UBERON:0006240!1.47e-38!41;UBERON:0003080!1.57e-37!42;UBERON:0001893!1.14e-34!34;UBERON:0002020!1.60e-34!34;UBERON:0003528!1.60e-34!34;UBERON:0002791!8.13e-32!33;UBERON:0000033!4.18e-31!123;UBERON:0001869!2.31e-29!32;UBERON:0000956!2.56e-29!25;UBERON:0000203!2.56e-29!25;UBERON:0002619!2.79e-29!22;UBERON:0000153!2.79e-29!129;UBERON:0007811!2.79e-29!129;UBERON:0003056!3.34e-29!61;UBERON:0001950!6.63e-28!20;UBERON:0004121!1.84e-26!169;UBERON:0000924!1.20e-25!173;UBERON:0006601!1.20e-25!173;UBERON:0007023!1.61e-24!115;UBERON:0003076!7.37e-24!15;UBERON:0003057!7.37e-24!15;UBERON:0002298!2.37e-22!8;UBERON:0004733!1.96e-19!12;UBERON:0002028!1.96e-19!12;UBERON:0007277!1.96e-19!12;UBERON:0004732!7.81e-18!13;UBERON:0000025!1.20e-15!194;UBERON:0001872!5.76e-13!5;UBERON:0004111!7.05e-13!241;UBERON:0006331!5.31e-12!3;UBERON:0000988!5.95e-12!3;UBERON:0001896!6.17e-12!3;UBERON:0005290!6.17e-12!3;UBERON:0010096!6.17e-12!3;UBERON:0000475!4.48e-11!365;UBERON:0002680!9.00e-11!9;UBERON:0001895!9.00e-11!9;UBERON:0010092!9.00e-11!9;UBERON:0000200!1.39e-10!6;UBERON:0000483!2.40e-10!309;UBERON:0000477!2.69e-10!286;UBERON:0000119!3.68e-10!312;UBERON:0000064!5.73e-10!219;UBERON:0001897!1.42e-08!2;UBERON:0002148!1.93e-08!2;UBERON:0009662!1.93e-08!2;UBERON:0001871!9.43e-08!7;UBERON:0000349!1.46e-07!5;UBERON:0000481!1.70e-07!347;UBERON:0002021!1.91e-07!5;UBERON:0002308!5.38e-07!9;UBERON:0000125!5.38e-07!9;UBERON:0000062!7.42e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.35e-34;6!UBERON:0002680;5.74e-23;9!UBERON:0001895;5.74e-23;9!UBERON:0004733;1.57e-17;12!UBERON:0002028;1.57e-17;12!UBERON:0004732;2.84e-16;13!UBERON:0001872;3.10e-11;5!UBERON:0000073;3.83e-07;53!UBERON:0002616;3.83e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.35e-34,6;UBERON:0006215,8.35e-34,6;UBERON:0002680,5.74e-23,9;UBERON:0001895,5.74e-23,9;UBERON:0010092,5.74e-23,9;UBERON:0004733,1.57e-17,12;UBERON:0002028,1.57e-17,12;UBERON:0007277,1.57e-17,12;UBERON:0004732,2.84e-16,13;UBERON:0003076,2.94e-14,15;UBERON:0003057,2.94e-14,15;UBERON:0001872,2.94e-11,5;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68 | |||
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|short_description=p22@TMEM178 | |||
}} |
Revision as of 02:43, 21 January 2014
Short description: | p22@TMEM178 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_TMEM178_5end |
Coexpression cluster: | NA |
Association with transcript: | 257bp_to_DQ890996_5end |
EntrezGene: | TMEM178 |
HGNC: | 28517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.35e-34 | 6 |
rhombic lip | 8.35e-34 | 6 |
regional part of metencephalon | 5.74e-23 | 9 |
metencephalon | 5.74e-23 | 9 |
future metencephalon | 5.74e-23 | 9 |
segmental subdivision of hindbrain | 1.57e-17 | 12 |
hindbrain | 1.57e-17 | 12 |
presumptive hindbrain | 1.57e-17 | 12 |
segmental subdivision of nervous system | 2.84e-16 | 13 |
posterior neural tube | 2.94e-14 | 15 |
chordal neural plate | 2.94e-14 | 15 |
parietal lobe | 2.94e-11 | 5 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |