FFCP PHASE1:Mm9::chr11:51398143..51398189,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:51398143..51398189,-|id=chr11:51398143..51398189,-|ontology_enrichment_celltype=CL:0000988!1.15e-09!32;CL:0002032!1.15e-09!32;CL:0000037!1.15e-09!32;CL:0000566!1.15e-09!32;CL:0000837!1.15e-09!32;CL:0000034!1.57e-08!97;CL:0002320!1.58e-08!46;CL:0000134!1.58e-08!46;CL:0000219!5.48e-08!54;CL:0000723!7.56e-08!91;CL:0000048!7.56e-08!91;CL:0000738!8.51e-08!17;CL:0002087!8.51e-08!17;CL:0002031!5.37e-07!25;CL:0000838!9.59e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,5.15e-11,32;CL:0002032,5.15e-11,32;CL:0000037,5.15e-11,32;CL:0000837,5.15e-11,32;CL:0002320,2.60e-10,46;CL:0000134,2.60e-10,46;CL:0000219,1.87e-09,54;CL:0000034,2.08e-09,97;CL:0000723,5.06e-09,91;CL:0000048,5.06e-09,91;CL:0000738,1.25e-08,17;CL:0002087,1.25e-08,17;CL:0002031,3.19e-08,25;CL:0000838,6.80e-08,12;CL:0000084,4.09e-07,11;CL:0000827,4.09e-07,11;CL:0000542,6.55e-07,13;CL:0000051,6.55e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.37e-10!45;UBERON:0003061!5.37e-10!45;UBERON:0002193!1.64e-09!48;UBERON:0002384!1.58e-08!46;UBERON:0003081!4.82e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.25e-11,45;UBERON:0003061,5.25e-11,45;UBERON:0002384,2.60e-10,46;UBERON:0002193,3.50e-10,48;UBERON:0002405,3.50e-10,48;UBERON:0000926,5.74e-09,120;UBERON:0004120,5.74e-09,120;UBERON:0006603,5.74e-09,120;UBERON:0003081,2.21e-08,87;UBERON:0003408,1.73e-07,24;UBERON:0002370,5.63e-07,23;UBERON:0000974,5.63e-07,23;UBERON:0004807,5.63e-07,23;UBERON:0005058,5.63e-07,23;UBERON:0003351,5.63e-07,23;UBERON:0009113,5.63e-07,23;UBERON:0003295,5.63e-07,23;UBERON:0009722,5.63e-07,23;UBERON:0005562,5.63e-07,23;UBERON:0007690,5.63e-07,23|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0,11.3628524628587,3.23814060948833,2.34064526321993,1.36974374580404,1.03703806693937,7.53283211697305,8.04267702254776,0.333109761815663,0.607425802169478,0.699561878128147,3.78554598429885,3.56497527374921,3.39511721438424,0.765389611359628,3.17731043842833,3.13439746966722,0.47997726838022,0.68822784320151,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,0,0,0,13.811543814318,6.2506827561904,14.1351410872926,35.8821207698919,11.6117732442936,6.79714494243615,4.02869817521847,3.04130793658544,2.9367480345869,4.69434806608824,0.872100625521786,1.09843091367236,2.13872888981712,1.25987779462826,0,8.22134769682908,5.80289713609076,8.73843877770406,0.257259436035947,0.573066879877513,0.515672092277442,1.41621522601718,1.5869729378161,1.90149421051854,2.03306719241479,2.66788438833342,2.6996991518442,4.94433181283487,1.4209602298922,1.19840044207362,2.68952813725088,0.933206510776299,1.75507719831198,0.841299845405528,0.856952953211411,0.441737081903227,0.857435594504678,1.72521847832825,0,1.10115880999389,0.638436690425939,0.307213066512487,0.791317726381163,1.09785172322892,0.52091337055676,1.11673199600552,0.56276261003168,0.61119299110724,0.294628585473668,0,0.559198337475902,0.605809546665472,0.453429360640713,1.73918693221007,0.860423876981386,0,0.539703191637817,0,0,0.421333260395256,1.1930122580464,1.03914401841148,1.06001872353102,1.26759077799012,3.84979432242953,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,1.55362730188303,1.1875371125186,0.867426633830679,0.608930956624282,0.461230994512117,2.11011696773672,0.823120949949934,1.50799909595611,0.247194967734374,2.4581890676385,0,0.323533699894818,1.10420759230197,1.45462575940567,0,0.585561594023094,0.41889341362691,0,3.95389910869537,6.59893004092748,3.81210681219194,0.748953197024114,0.457500602818626,1.38219787324151,0.869121600961382,0,0.20778804455956,0.973447578406546,0.81471491080253,1.99051152976149,2.27450482590307,0.631325567659422,0.520481771850815,1.37941262660084,0.540186389416048,1.05493372485001,0.95251098811859,2.17793324484245,1.68663104207512,0.517406741478031,0.215567992932842,0.378212160335639,1.05570674498369,0.43839146485515,1.11218899690239,0.348252166522167,0.823128545631774,0.59710280045548,4.91549231119264,2.05878325691772,4.26245249093389,0.207125772535502,0.703578179943289,1.44049649168812,0.23674473558521,1.18058539048442,1.3884040159864,1.39520366850245,0.268273401399619,0.700592054203017,0.987359099480883,0.32833492815819,0.648550476366846,1.31579988682799,2.41505126820156,2.54992195644706,0.630869845692382,1.02904612379284,0,0,0.853153002140936,0,1.03093969057675,0,1.11189021922435,0,0.474529061544512,0,0.502670417600539,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.796565093017469,0.948339504765408,0.685491075658373,0,0.610953983535943,0.969762435838129,0.210407459670956,0.505892296994058,0,0.627994911365499,1.48076596706161,0,0,0.196558995113203,0.899448449539415,0.202860121388503,0.482354319504834,0,1.72617682470486,0.648540907100142,0,0,1.11642284300551,0.624075346229121,0.252578877947112,0.538192240565737,0,2.401791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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:51398143..51398189,- | |||
|description=CAGE_peak_at_chr11:51398143..51398189,- | |||
|id=chr11:51398143..51398189,- | |||
|ontology_enrichment_celltype=CL:0000988!1.15e-09!32;CL:0002032!1.15e-09!32;CL:0000037!1.15e-09!32;CL:0000566!1.15e-09!32;CL:0000837!1.15e-09!32;CL:0000034!1.57e-08!97;CL:0002320!1.58e-08!46;CL:0000134!1.58e-08!46;CL:0000219!5.48e-08!54;CL:0000723!7.56e-08!91;CL:0000048!7.56e-08!91;CL:0000738!8.51e-08!17;CL:0002087!8.51e-08!17;CL:0002031!5.37e-07!25;CL:0000838!9.59e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.15e-11,32;CL:0002032,5.15e-11,32;CL:0000037,5.15e-11,32;CL:0000837,5.15e-11,32;CL:0002320,2.60e-10,46;CL:0000134,2.60e-10,46;CL:0000219,1.87e-09,54;CL:0000034,2.08e-09,97;CL:0000723,5.06e-09,91;CL:0000048,5.06e-09,91;CL:0000738,1.25e-08,17;CL:0002087,1.25e-08,17;CL:0002031,3.19e-08,25;CL:0000838,6.80e-08,12;CL:0000084,4.09e-07,11;CL:0000827,4.09e-07,11;CL:0000542,6.55e-07,13;CL:0000051,6.55e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.37e-10!45;UBERON:0003061!5.37e-10!45;UBERON:0002193!1.64e-09!48;UBERON:0002384!1.58e-08!46;UBERON:0003081!4.82e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.25e-11,45;UBERON:0003061,5.25e-11,45;UBERON:0002384,2.60e-10,46;UBERON:0002193,3.50e-10,48;UBERON:0002405,3.50e-10,48;UBERON:0000926,5.74e-09,120;UBERON:0004120,5.74e-09,120;UBERON:0006603,5.74e-09,120;UBERON:0003081,2.21e-08,87;UBERON:0003408,1.73e-07,24;UBERON:0002370,5.63e-07,23;UBERON:0000974,5.63e-07,23;UBERON:0004807,5.63e-07,23;UBERON:0005058,5.63e-07,23;UBERON:0003351,5.63e-07,23;UBERON:0009113,5.63e-07,23;UBERON:0003295,5.63e-07,23;UBERON:0009722,5.63e-07,23;UBERON:0005562,5.63e-07,23;UBERON:0007690,5.63e-07,23 | |||
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| |||
|short_description=p@chr11:51398143..51398189,- | |||
}} |
Latest revision as of 00:39, 6 August 2015
Short description: | p@chr11:51398143..51398189, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:51398143..51398189, - |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.15e-11 | 32 |
hematopoietic oligopotent progenitor cell | 5.15e-11 | 32 |
hematopoietic stem cell | 5.15e-11 | 32 |
hematopoietic multipotent progenitor cell | 5.15e-11 | 32 |
connective tissue cell | 2.60e-10 | 46 |
mesenchymal cell | 2.60e-10 | 46 |
motile cell | 1.87e-09 | 54 |
stem cell | 2.08e-09 | 97 |
somatic stem cell | 5.06e-09 | 91 |
multi fate stem cell | 5.06e-09 | 91 |
leukocyte | 1.25e-08 | 17 |
nongranular leukocyte | 1.25e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 3.19e-08 | 25 |
lymphoid lineage restricted progenitor cell | 6.80e-08 | 12 |
T cell | 4.09e-07 | 11 |
pro-T cell | 4.09e-07 | 11 |
lymphocyte | 6.55e-07 | 13 |
common lymphoid progenitor | 6.55e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.25e-11 | 45 |
blood island | 5.25e-11 | 45 |
connective tissue | 2.60e-10 | 46 |
hemolymphoid system | 3.50e-10 | 48 |
immune system | 3.50e-10 | 48 |
mesoderm | 5.74e-09 | 120 |
mesoderm-derived structure | 5.74e-09 | 120 |
presumptive mesoderm | 5.74e-09 | 120 |
lateral plate mesoderm | 2.21e-08 | 87 |
gland of gut | 1.73e-07 | 24 |
thymus | 5.63e-07 | 23 |
neck | 5.63e-07 | 23 |
respiratory system epithelium | 5.63e-07 | 23 |
hemolymphoid system gland | 5.63e-07 | 23 |
pharyngeal epithelium | 5.63e-07 | 23 |
thymic region | 5.63e-07 | 23 |
pharyngeal gland | 5.63e-07 | 23 |
entire pharyngeal arch endoderm | 5.63e-07 | 23 |
thymus primordium | 5.63e-07 | 23 |
early pharyngeal endoderm | 5.63e-07 | 23 |