FFCP PHASE1:Hg19::chr4:11489612..11489617,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr4:11489612..11489617,- | |||
|id=chr4:11489612..11489617,- | |||
|ontology_enrichment_celltype=CL:0002057!1.33e-109!42;CL:0000860!5.23e-108!45;CL:0002194!3.39e-78!63;CL:0000576!3.39e-78!63;CL:0000040!3.39e-78!63;CL:0000559!3.39e-78!63;CL:0002009!1.36e-75!65;CL:0000766!9.56e-72!76;CL:0000839!9.98e-70!70;CL:0000557!1.19e-68!71;CL:0002087!1.11e-48!119;CL:0000738!1.38e-47!140;CL:0000763!2.36e-46!112;CL:0000049!2.36e-46!112;CL:0002031!3.47e-41!124;CL:0000037!3.16e-37!172;CL:0000566!3.16e-37!172;CL:0000988!9.91e-35!182;CL:0002032!6.67e-33!165;CL:0000837!6.67e-33!165;CL:0000134!1.72e-13!358;CL:0002320!4.57e-13!365;CL:0000219!1.44e-11!390;CL:0000048!8.95e-10!430;CL:0000723!1.61e-09!436;CL:0000034!3.44e-09!444;CL:0002393!2.71e-08!9;CL:0002397!2.71e-08!9;CL:0000842!8.80e-07!3;CL:0000767!9.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.03e-62;33!CL:0002057;3.03e-62;33!CL:0000473;6.99e-46;39!CL:0000234;6.99e-46;39!CL:0000576;1.51e-42;48!CL:0000766;4.25e-27;69!CL:0002393;2.45e-14;6!CL:0002397;2.45e-14;6!CL:0002087;2.90e-13;104!CL:0000763;4.92e-11;100!CL:0000738;6.31e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.64e-75,42;CL:0002057,4.64e-75,42;CL:0000473,2.40e-65,48;CL:0000234,2.40e-65,48;CL:0002194,9.73e-52,59;CL:0000576,9.73e-52,59;CL:0000040,9.73e-52,59;CL:0000559,9.73e-52,59;CL:0002009,5.56e-50,61;CL:0000766,9.90e-47,72;CL:0000839,4.78e-46,66;CL:0000557,2.49e-45,67;CL:0002087,1.59e-31,115;CL:0000763,2.36e-30,108;CL:0000049,2.36e-30,108;CL:0000738,5.04e-29,136;CL:0002031,4.16e-27,120;CL:0000037,5.84e-23,168;CL:0002032,1.02e-21,161;CL:0000837,1.02e-21,161;CL:0000988,1.21e-21,177;CL:0002393,8.24e-10,9;CL:0002397,8.24e-10,9;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-55;42!CL:0000049;1.28e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.87e-10;1!DOID:0070004;2.87e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.73e-10,1;DOID:0070004,1.73e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.50e-64!80;UBERON:0001474!4.10e-59!86;UBERON:0002390!6.78e-55!102;UBERON:0003061!6.78e-55!102;UBERON:0002193!2.53e-49!112;UBERON:0004765!2.90e-49!101;UBERON:0001434!2.90e-49!101;UBERON:0002405!2.29e-42!115;UBERON:0002204!8.42e-27!167;UBERON:0003081!3.26e-23!216;UBERON:0002384!1.74e-12!375;UBERON:0000926!1.50e-07!448;UBERON:0004120!1.50e-07!448;UBERON:0006603!1.50e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.06e-44,76;UBERON:0001474,7.72e-41,82;UBERON:0002390,1.94e-37,98;UBERON:0003061,1.94e-37,98;UBERON:0004765,5.35e-37,90;UBERON:0002405,1.00e-35,93;UBERON:0002193,9.76e-34,108;UBERON:0001434,4.74e-33,100;UBERON:0002204,1.09e-18,167;UBERON:0003081,1.28e-16,203;UBERON:0000926,1.36e-09,315;UBERON:0004120,1.36e-09,315;UBERON:0006603,1.36e-09,315;UBERON:0002384,1.10e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,1.23852898652861,0,0,0,0,0,0,3.32397245119126,1.80490002723128,2.60413044859022,0,0,0,0.290796477559129,0.377875943688809,0,0.464858073811369,1.23350366406548,0.619412741790207,2.58923153089935,7.17249978281482,3.54723344832878,2.41321976515633,4.51839278508678,1.35426486594342,1.31769637679823,1.09162460023138,0.449446968890169,4.59125838556354,5.77672248736969,2.55734850319616,0.989553900560148,0.797854630486527,0.852449501065388,1.45104619314292,0.56738522469114,0.622822248995575,1.50749199154046,1.5644487552606,1.08594422352558,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:11489612..11489617,- | |||
}} |
Revision as of 00:14, 22 January 2014
Short description: | p@chr4:11489612..11489617, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:11489612..11489617, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.64e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.64e-75 | 42 |
defensive cell | 2.40e-65 | 48 |
phagocyte | 2.40e-65 | 48 |
monopoietic cell | 9.73e-52 | 59 |
monocyte | 9.73e-52 | 59 |
monoblast | 9.73e-52 | 59 |
promonocyte | 9.73e-52 | 59 |
macrophage dendritic cell progenitor | 5.56e-50 | 61 |
myeloid leukocyte | 9.90e-47 | 72 |
myeloid lineage restricted progenitor cell | 4.78e-46 | 66 |
granulocyte monocyte progenitor cell | 2.49e-45 | 67 |
nongranular leukocyte | 1.59e-31 | 115 |
myeloid cell | 2.36e-30 | 108 |
common myeloid progenitor | 2.36e-30 | 108 |
leukocyte | 5.04e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 4.16e-27 | 120 |
hematopoietic stem cell | 5.84e-23 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-21 | 161 |
hematopoietic cell | 1.21e-21 | 177 |
intermediate monocyte | 8.24e-10 | 9 |
CD14-positive, CD16-positive monocyte | 8.24e-10 | 9 |
mesenchymal cell | 2.93e-09 | 354 |
connective tissue cell | 5.13e-09 | 361 |
motile cell | 3.71e-08 | 386 |
multi fate stem cell | 4.21e-07 | 427 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.06e-44 | 76 |
bone element | 7.72e-41 | 82 |
hematopoietic system | 1.94e-37 | 98 |
blood island | 1.94e-37 | 98 |
skeletal element | 5.35e-37 | 90 |
immune system | 1.00e-35 | 93 |
hemolymphoid system | 9.76e-34 | 108 |
skeletal system | 4.74e-33 | 100 |
musculoskeletal system | 1.09e-18 | 167 |
lateral plate mesoderm | 1.28e-16 | 203 |
mesoderm | 1.36e-09 | 315 |
mesoderm-derived structure | 1.36e-09 | 315 |
presumptive mesoderm | 1.36e-09 | 315 |
connective tissue | 1.10e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.73e-10 | 1 |
myeloma | 1.73e-10 | 1 |