FFCP PHASE1:Mm9::chr15:79572923..79572941,-: Difference between revisions
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{{FFCP|EntrezGene=223697|HGNC=|MCL_coexpression_id=3|UniProt=Q8BJS4|association_with_transcript=0bp_to_ENSMUST00000100439,ENSMUST00000159762_5end|description=CAGE_peak_1_at_Sun2_5end|id=chr15:79572923..79572941,-|ontology_enrichment_celltype=CL:0002320!7.73e-11!46;CL:0000134!7.73e-11!46;CL:0000219!2.19e-10!54;CL:0000723!4.26e-09!91;CL:0000048!4.26e-09!91;CL:0000034!9.41e-09!97;CL:0000988!3.40e-07!32;CL:0002032!3.40e-07!32;CL:0000037!3.40e-07!32;CL:0000566!3.40e-07!32;CL:0000837!3.40e-07!32|ontology_enrichment_celltype_v019_2=CL:0002320,7.73e-11,46;CL:0000134,7.73e-11,46;CL:0000219,2.19e-10,54;CL:0000723,4.26e-09,91;CL:0000048,4.26e-09,91;CL:0000034,9.35e-09,97;CL:0000988,3.40e-07,32;CL:0002032,3.40e-07,32;CL:0000037,3.40e-07,32;CL:0000837,3.40e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.91e-14!45;UBERON:0003061!4.91e-14!45;UBERON:0003081!6.51e-14!88;UBERON:0002405!7.20e-13!70;UBERON:0002193!2.89e-12!48;UBERON:0002384!7.73e-11!46;UBERON:0002204!7.69e-10!32;UBERON:0005057!3.28e-09!51;UBERON:0004177!5.29e-09!29;UBERON:0006562!7.61e-09!24;UBERON:0001557!7.61e-09!24;UBERON:0001042!7.61e-09!24;UBERON:0008814!7.61e-09!24;UBERON:0009145!7.61e-09!24;UBERON:0003408!1.10e-08!24;UBERON:0002370!1.36e-08!23;UBERON:0000974!1.36e-08!23;UBERON:0004807!1.36e-08!23;UBERON:0005058!1.36e-08!23;UBERON:0003351!1.36e-08!23;UBERON:0009113!1.36e-08!23;UBERON:0003295!1.36e-08!23;UBERON:0009722!1.36e-08!23;UBERON:0005562!1.36e-08!23;UBERON:0007690!1.36e-08!23;UBERON:0000072!1.93e-07!27;UBERON:0001004!5.84e-07!42;UBERON:0000065!8.00e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.91e-14,45;UBERON:0003061,4.91e-14,45;UBERON:0003081,1.11e-13,87;UBERON:0002193,2.89e-12,48;UBERON:0002405,2.89e-12,48;UBERON:0002384,7.73e-11,46;UBERON:0000926,6.08e-10,120;UBERON:0004120,6.08e-10,120;UBERON:0006603,6.08e-10,120;UBERON:0002204,7.69e-10,32;UBERON:0004177,5.29e-09,29;UBERON:0005057,5.29e-09,29;UBERON:0006562,7.61e-09,24;UBERON:0001557,7.61e-09,24;UBERON:0001042,7.61e-09,24;UBERON:0008814,7.61e-09,24;UBERON:0009145,7.61e-09,24;UBERON:0003408,1.10e-08,24;UBERON:0002370,1.36e-08,23;UBERON:0000974,1.36e-08,23;UBERON:0004807,1.36e-08,23;UBERON:0005058,1.36e-08,23;UBERON:0003351,1.36e-08,23;UBERON:0009113,1.36e-08,23;UBERON:0003295,1.36e-08,23;UBERON:0009722,1.36e-08,23;UBERON:0005562,1.36e-08,23;UBERON:0007690,1.36e-08,23;UBERON:0000077,3.37e-08,35;UBERON:0000072,1.93e-07,27;UBERON:0001004,5.84e-07,42;UBERON:0000065,8.00e-07,41;UBERON:0001041,8.62e-07,80|phase1_expression=12.3314612270691,2.79180326111489,2.72999543633722,0.90739263392049,1.50268718983904,7.38668796412315,5.13947809310157,143.068642373266,103.479710781475,109.308133792371,12.3276937122364,5.42450681168288,148.773434310218,127.196685519641,21.6521345180181,18.8301998672538,21.6864182219725,60.4110046661025,62.7984105914284,72.9950201092612,18.7945671233864,50.8369670148533,36.5679704794509,5.75972722056264,4.12936705920906,1.72269589234506,0.86152399231815,2.37018355954478,3.04037471130198,4.53654233567875,3.54768817048488,7.62036808151557,3.69038872550742,15.8481681015439,5.48818077527422,5.31950865147176,4.49172583777212,479.637248824496,266.435352482616,359.137288366026,672.93682230748,606.5443906431,524.836691626677,32.9849663096012,37.0025798951228,24.228171285342,61.0265248591471,16.7879370412944,35.5891616029844,24.692597182434,20.5780039789283,14.3752564364972,80.0323030895402,221.23545331346,194.598309703487,30.6138728882777,40.9742819112422,47.4418324895247,17.601532094785,14.2827564403449,19.6487735086916,21.3472055203553,50.6898033783349,45.4449357227106,30.6548572395762,44.0497671266582,29.9600110518405,25.3584081512226,20.0120951755362,27.8112232963283,21.2428210964896,8.2838785477103,9.49734726091938,22.1708346579067,15.5269663049543,45.041720543891,20.9220173898839,17.6208526557559,15.0534402591119,18.4640802822271,11.5274430939036,16.6692278578163,24.0097379141188,18.5711661310454,18.0301932376636,8.83885756421003,6.40672563595963,14.5391567743734,12.1919171266426,11.4113055761246,30.7256358023778,14.6272059086836,48.957936026958,23.2072372404261,31.8390444549358,95.8777538388298,38.7626599563635,38.5172529026411,42.3451187502676,38.1606740471167,7.60554466794075,52.6138557398703,152.883143823987,106.660005473,13.8554266247177,13.9347926011304,14.1546844604139,30.487095884989,26.9295398993059,15.289540323677,11.7970022200972,10.0473607843007,9.91646638201052,6.93324146542064,11.5236932992991,11.4356598110005,15.5732829672656,50.0313774942894,86.6918340910877,25.2356285917958,44.6099867289995,39.7597707570882,7.45567044872489,15.517382241612,17.1746299587033,7.15279754584056,67.0964697233154,46.7924130174858,64.9328860343361,11.5338792341713,28.8225379775735,12.942398267625,12.8629996942285,11.5071955798649,12.8828587626927,15.5751612545047,19.5531578592607,49.6383812734271,17.1851475734899,16.414464759145,8.32770834961304,10.5754968039398,12.9644733459851,10.3986324306643,20.751132241155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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:223697 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BJS4 | |||
|association_with_transcript=0bp_to_ENSMUST00000100439,ENSMUST00000159762_5end | |||
|cluster_id=chr15:79572923..79572941,- | |||
|description=CAGE_peak_1_at_Sun2_5end | |||
|id=chr15:79572923..79572941,- | |||
|ontology_enrichment_celltype=CL:0002320!7.73e-11!46;CL:0000134!7.73e-11!46;CL:0000219!2.19e-10!54;CL:0000723!4.26e-09!91;CL:0000048!4.26e-09!91;CL:0000034!9.41e-09!97;CL:0000988!3.40e-07!32;CL:0002032!3.40e-07!32;CL:0000037!3.40e-07!32;CL:0000566!3.40e-07!32;CL:0000837!3.40e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,7.73e-11,46;CL:0000134,7.73e-11,46;CL:0000219,2.19e-10,54;CL:0000723,4.26e-09,91;CL:0000048,4.26e-09,91;CL:0000034,9.35e-09,97;CL:0000988,3.40e-07,32;CL:0002032,3.40e-07,32;CL:0000037,3.40e-07,32;CL:0000837,3.40e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.91e-14!45;UBERON:0003061!4.91e-14!45;UBERON:0003081!6.51e-14!88;UBERON:0002405!7.20e-13!70;UBERON:0002193!2.89e-12!48;UBERON:0002384!7.73e-11!46;UBERON:0002204!7.69e-10!32;UBERON:0005057!3.28e-09!51;UBERON:0004177!5.29e-09!29;UBERON:0006562!7.61e-09!24;UBERON:0001557!7.61e-09!24;UBERON:0001042!7.61e-09!24;UBERON:0008814!7.61e-09!24;UBERON:0009145!7.61e-09!24;UBERON:0003408!1.10e-08!24;UBERON:0002370!1.36e-08!23;UBERON:0000974!1.36e-08!23;UBERON:0004807!1.36e-08!23;UBERON:0005058!1.36e-08!23;UBERON:0003351!1.36e-08!23;UBERON:0009113!1.36e-08!23;UBERON:0003295!1.36e-08!23;UBERON:0009722!1.36e-08!23;UBERON:0005562!1.36e-08!23;UBERON:0007690!1.36e-08!23;UBERON:0000072!1.93e-07!27;UBERON:0001004!5.84e-07!42;UBERON:0000065!8.00e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.91e-14,45;UBERON:0003061,4.91e-14,45;UBERON:0003081,1.11e-13,87;UBERON:0002193,2.89e-12,48;UBERON:0002405,2.89e-12,48;UBERON:0002384,7.73e-11,46;UBERON:0000926,6.08e-10,120;UBERON:0004120,6.08e-10,120;UBERON:0006603,6.08e-10,120;UBERON:0002204,7.69e-10,32;UBERON:0004177,5.29e-09,29;UBERON:0005057,5.29e-09,29;UBERON:0006562,7.61e-09,24;UBERON:0001557,7.61e-09,24;UBERON:0001042,7.61e-09,24;UBERON:0008814,7.61e-09,24;UBERON:0009145,7.61e-09,24;UBERON:0003408,1.10e-08,24;UBERON:0002370,1.36e-08,23;UBERON:0000974,1.36e-08,23;UBERON:0004807,1.36e-08,23;UBERON:0005058,1.36e-08,23;UBERON:0003351,1.36e-08,23;UBERON:0009113,1.36e-08,23;UBERON:0003295,1.36e-08,23;UBERON:0009722,1.36e-08,23;UBERON:0005562,1.36e-08,23;UBERON:0007690,1.36e-08,23;UBERON:0000077,3.37e-08,35;UBERON:0000072,1.93e-07,27;UBERON:0001004,5.84e-07,42;UBERON:0000065,8.00e-07,41;UBERON:0001041,8.62e-07,80 | |||
|phase1_expression=12.3314612270691,2.79180326111489,2.72999543633722,0.90739263392049,1.50268718983904,7.38668796412315,5.13947809310157,143.068642373266,103.479710781475,109.308133792371,12.3276937122364,5.42450681168288,148.773434310218,127.196685519641,21.6521345180181,18.8301998672538,21.6864182219725,60.4110046661025,62.7984105914284,72.9950201092612,18.7945671233864,50.8369670148533,36.5679704794509,5.75972722056264,4.12936705920906,1.72269589234506,0.86152399231815,2.37018355954478,3.04037471130198,4.53654233567875,3.54768817048488,7.62036808151557,3.69038872550742,15.8481681015439,5.48818077527422,5.31950865147176,4.49172583777212,479.637248824496,266.435352482616,359.137288366026,672.93682230748,606.5443906431,524.836691626677,32.9849663096012,37.0025798951228,24.228171285342,61.0265248591471,16.7879370412944,35.5891616029844,24.692597182434,20.5780039789283,14.3752564364972,80.0323030895402,221.23545331346,194.598309703487,30.6138728882777,40.9742819112422,47.4418324895247,17.601532094785,14.2827564403449,19.6487735086916,21.3472055203553,50.6898033783349,45.4449357227106,30.6548572395762,44.0497671266582,29.9600110518405,25.3584081512226,20.0120951755362,27.8112232963283,21.2428210964896,8.2838785477103,9.49734726091938,22.1708346579067,15.5269663049543,45.041720543891,20.9220173898839,17.6208526557559,15.0534402591119,18.4640802822271,11.5274430939036,16.6692278578163,24.0097379141188,18.5711661310454,18.0301932376636,8.83885756421003,6.40672563595963,14.5391567743734,12.1919171266426,11.4113055761246,30.7256358023778,14.6272059086836,48.957936026958,23.2072372404261,31.8390444549358,95.8777538388298,38.7626599563635,38.5172529026411,42.3451187502676,38.1606740471167,7.60554466794075,52.6138557398703,152.883143823987,106.660005473,13.8554266247177,13.9347926011304,14.1546844604139,30.487095884989,26.9295398993059,15.289540323677,11.7970022200972,10.0473607843007,9.91646638201052,6.93324146542064,11.5236932992991,11.4356598110005,15.5732829672656,50.0313774942894,86.6918340910877,25.2356285917958,44.6099867289995,39.7597707570882,7.45567044872489,15.517382241612,17.1746299587033,7.15279754584056,67.0964697233154,46.7924130174858,64.9328860343361,11.5338792341713,28.8225379775735,12.942398267625,12.8629996942285,11.5071955798649,12.8828587626927,15.5751612545047,19.5531578592607,49.6383812734271,17.1851475734899,16.414464759145,8.32770834961304,10.5754968039398,12.9644733459851,10.3986324306643,20.751132241155,11.0177799444971,16.6789069716317,15.78090561508,8.62271971731369,8.69887968771969,11.9646764431485,13.8093311429372,15.5706459566335,19.5021213252413,22.8418171412817,12.5391588095651,39.3239384895411,75.917632598841,137.250970208071,9.94203708170409,10.7881987591304,13.3245925481151,13.2577051927718,10.6252685143598,12.4956361438776,16.509910077279,15.5598572811779,25.6883753207773,16.785104691175,19.7000956894914,33.0760742947091,39.7663965796904,25.4678133737619,38.7856550217474,8.83217783969334,11.936935035997,6.93879444265976,4.7601101999438,7.03851226766272,11.3795969211615,10.6959992897337,6.05050573870028,7.11609740303585,9.13083005340284,6.16887780007865,6.75265714368445,9.55073793441024,9.94782360205754,6.43381487493096,8.08937467788799,7.99710784536369,12.1476176685164,7.96605184002943,10.7393601853145,11.270773567308,8.34970444165788,10.4734343070518,13.6764848786121,11.6355228308633,7.0852871030209,8.16393384775149,12.0929220643365,29.0523574545406,5.00535317148282,5.50365186316968,5.17182858485164,8.31726497692862,19.0529956204409,19.8608164389507,29.3450060199827,49.9376498467109,26.6324570792439,40.2550978276593,50.239027935248,28.0833905803105,26.7733610623938,15.4281775628844,33.7710464954357,32.3318082791558,10.9905018826881,12.0594082567099,15.1073126339917,16.1936271319066,18.7607008334834,15.4728366575909,25.7576415172294,23.3300013277163,22.8108630338238,22.0047580747332,21.7938208571932,20.7221978239075,24.7349890174385,36.1899081454253,34.2660580805787,22.1293922858566,25.9380541526449,18.6238684385839,15.003095883802,12.2951209032507,61.3504353106626,15.4599027513966,17.1793047490521,18.3109888072879,20.0733790280144,20.7202766896627,27.4584234865167,18.6212922770451,17.82760733259,14.2303600060748,15.7447445046685,18.1683309066584,18.8749539887291,19.8722090411363,24.2506080769627,6.63725691699814,10.4395673546642,7.55808892411878,5.46954731292105,9.15435867930396,9.83792473420568,8.78656196771952,12.7236805317127,9.9819265947722,8.84902922220285,7.37930260024991,6.18813259489121,11.5749465956288,10.8036656418786,9.05510786479281,8.78781843629528,7.27094957933322,12.3074484145429,15.7967059778036,31.0554248096891,6.33613611772018,16.3110694565142,14.1138174755176,50.4551934000929,35.6836382997951,40.2890338520081,94.1847794184747,100.290089744232,8.16146342563582,18.7279555030615,37.2498520139319,27.0366797031821,29.8163189065236,21.8507410125442,15.3097535047548,22.4202609742392,89.238675746774,97.2662593649423,102.958980484296,16.2294005062569,9.49007980743406,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| |||
|short_description=p1@Sun2 | |||
}} |
Revision as of 15:33, 5 August 2015
Short description: | p1@Sun2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sun2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000100439, ENSMUST00000159762_5end |
EntrezGene: | 223697 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 7.73e-11 | 46 |
mesenchymal cell | 7.73e-11 | 46 |
motile cell | 2.19e-10 | 54 |
somatic stem cell | 4.26e-09 | 91 |
multi fate stem cell | 4.26e-09 | 91 |
stem cell | 9.35e-09 | 97 |
hematopoietic cell | 3.40e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.40e-07 | 32 |
hematopoietic stem cell | 3.40e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.40e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.91e-14 | 45 |
blood island | 4.91e-14 | 45 |
lateral plate mesoderm | 1.11e-13 | 87 |
hemolymphoid system | 2.89e-12 | 48 |
immune system | 2.89e-12 | 48 |
connective tissue | 7.73e-11 | 46 |
mesoderm | 6.08e-10 | 120 |
mesoderm-derived structure | 6.08e-10 | 120 |
presumptive mesoderm | 6.08e-10 | 120 |
musculoskeletal system | 7.69e-10 | 32 |
hemopoietic organ | 5.29e-09 | 29 |
immune organ | 5.29e-09 | 29 |
pharynx | 7.61e-09 | 24 |
upper respiratory tract | 7.61e-09 | 24 |
chordate pharynx | 7.61e-09 | 24 |
pharyngeal arch system | 7.61e-09 | 24 |
pharyngeal region of foregut | 7.61e-09 | 24 |
gland of gut | 1.10e-08 | 24 |
thymus | 1.36e-08 | 23 |
neck | 1.36e-08 | 23 |
respiratory system epithelium | 1.36e-08 | 23 |
hemolymphoid system gland | 1.36e-08 | 23 |
pharyngeal epithelium | 1.36e-08 | 23 |
thymic region | 1.36e-08 | 23 |
pharyngeal gland | 1.36e-08 | 23 |
entire pharyngeal arch endoderm | 1.36e-08 | 23 |
thymus primordium | 1.36e-08 | 23 |
early pharyngeal endoderm | 1.36e-08 | 23 |
mixed endoderm/mesoderm-derived structure | 3.37e-08 | 35 |
segment of respiratory tract | 1.93e-07 | 27 |
respiratory system | 5.84e-07 | 42 |
respiratory tract | 8.00e-07 | 41 |
foregut | 8.62e-07 | 80 |