FFCP PHASE1:Hg19::chr5:139554690..139554699,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30239 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H1C7 | |||
|association_with_transcript=37bp_to_NM_032412,uc003lfd.2,uc010jfi.2_5end | |||
|description=CAGE_peak_5_at_C5orf32_5end | |||
|id=chr5:139554690..139554699,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.88e-19!180;CL:0000222!2.20e-11!119;CL:0000183!2.67e-09!59;CL:0000057!1.11e-08!75;CL:0000680!7.27e-08!57;CL:0000056!7.27e-08!57;CL:0000355!7.27e-08!57;CL:0000187!8.98e-08!54;CL:0000192!8.58e-07!42;CL:0000514!8.58e-07!42;CL:0000393!9.01e-07!60;CL:0000211!9.01e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.84e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.97e-10,121;CL:0000057,2.69e-09,76;CL:0000192,3.10e-08,43;CL:0000514,3.10e-08,43;CL:0000187,4.14e-08,55;CL:0000680,1.29e-07,58;CL:0000056,1.29e-07,58;CL:0000355,1.29e-07,58;CL:0000393,3.33e-07,61;CL:0000211,3.33e-07,61;CL:0000359,5.82e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.04e-13!79;UBERON:0007798!3.04e-13!79;UBERON:0001009!2.91e-11!113;UBERON:0004535!1.20e-10!110;UBERON:0000055!3.37e-10!69;UBERON:0004290!3.94e-10!70;UBERON:0000119!1.44e-09!312;UBERON:0000914!1.74e-09!83;UBERON:0002329!1.74e-09!83;UBERON:0003077!1.74e-09!83;UBERON:0003059!1.74e-09!83;UBERON:0007282!1.74e-09!83;UBERON:0009618!1.74e-09!83;UBERON:0007285!1.74e-09!83;UBERON:0000483!3.45e-09!309;UBERON:0000025!4.10e-09!194;UBERON:0000477!1.05e-08!286;UBERON:0004872!1.22e-08!84;UBERON:0001981!2.46e-08!60;UBERON:0007500!2.46e-08!60;UBERON:0004537!2.46e-08!60;UBERON:0006965!2.46e-08!60;UBERON:0001134!3.95e-08!61;UBERON:0002036!3.95e-08!61;UBERON:0003082!3.95e-08!61;UBERON:0002385!5.20e-08!63;UBERON:0001015!5.20e-08!63;UBERON:0000383!5.20e-08!63;UBERON:0000468!7.96e-08!659;UBERON:0001637!2.84e-07!42;UBERON:0003509!2.84e-07!42;UBERON:0004572!2.84e-07!42;UBERON:0004111!4.11e-07!241;UBERON:0000486!4.77e-07!82;UBERON:0000475!5.12e-07!365;UBERON:0000467!7.99e-07!625;UBERON:0003914!8.24e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;7.43e-07;75!UBERON:0007798;7.43e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.83e-14,78;UBERON:0007798,5.83e-14,78;UBERON:0001009,1.46e-11,112;UBERON:0004535,3.55e-11,109;UBERON:0000055,8.64e-11,68;UBERON:0007524,1.30e-10,73;UBERON:0003077,4.05e-10,72;UBERON:0007285,4.05e-10,72;UBERON:0002329,5.38e-10,71;UBERON:0003059,5.38e-10,71;UBERON:0007282,5.38e-10,71;UBERON:0004290,5.38e-10,71;UBERON:0009618,5.38e-10,71;UBERON:0007503,8.10e-10,78;UBERON:0004872,7.28e-09,83;UBERON:0010314,1.44e-08,132;UBERON:0007500,1.64e-08,59;UBERON:0001981,1.64e-08,59;UBERON:0004537,1.64e-08,59;UBERON:0006965,1.64e-08,59;UBERON:0001637,1.65e-08,42;UBERON:0003509,1.65e-08,42;UBERON:0004572,1.65e-08,42;UBERON:0000119,6.39e-08,309;UBERON:0000486,1.40e-07,83;UBERON:0000483,1.54e-07,306;UBERON:0001134,1.73e-07,62;UBERON:0002036,1.73e-07,62;UBERON:0003082,1.73e-07,62;UBERON:0002385,2.43e-07,64;UBERON:0001015,2.43e-07,64;UBERON:0000383,2.43e-07,64;UBERON:0000025,4.52e-07,192 | |||
|phase1_expression=1.09007027562334,2.78330681058278,0.986680828671798,1.0007329835313,0.893922188854576,4.36169262050184,2.53299878168311,5.05375898741465,4.17897005119742,0.737201809504527,0.697801167972428,0.218441372130172,0.527533956456907,0.990130823680373,0.331397375727916,0.672325146451775,0,1.46062018077475,2.43966399395253,1.84681587115182,1.83600622119828,3.44800193625897,1.43117993565528,1.09499540058307,1.00434111675842,1.06978768047132,0.738905305049512,1.02324015707783,0.393364276848904,0,0.154816123316076,0,1.204823675113,1.10926203050036,0,0.426507697462265,1.46800219667424,0,0.401088894940283,0,0.895661896959697,2.91504299417082,1.80302897343931,0.436194716338694,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,0,1.43846196161075,0.768482119587302,0.709446689665756,1.03423704220986,1.29096936716765,0,0.564727018627814,0,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0.398927315243264,0.852449501065388,0.290209238628584,1.13477044938228,0,1.50749199154046,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,0,0.633765858935825,0.212604299965044,0.209658645508376,0.22465726229299,0.600707571366025,0.64290234678832,0.285012743741249,0,0.91332076882317,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.02290049474824,1.44575660953827,1.50401373190767,1.44846518960824,1.5905718941022,1.94653948121054,1.41802225746102,2.66075276955077,0.790513071238134,1.17881167947941,0.364295288292542,0,0,0.174129737299267,1.19662164466979,0.953962497221368,0.571994910780128,0.74291500265913,1.59009925893364,2.58070378531837,0.347140501607594,1.69592382577203,4.19499436209906,1.92582629358047,1.04497483268405,2.06733407335463,1.06729878806013,2.00832367658802,0,0.760272105718513,1.46437234528902,1.10298924103761,0,1.25019619597712,1.79623498100936,1.68917220724983,1.53316637465883,0.949265659568129,2.19842092716489,0,3.87780264148325,0,0,1.8994576749687,1.85372853138506,0.860509862246441,1.41867352879343,1.12135520028461,3.20246987189115,2.4666754841716,2.17847724779836,2.69421344139376,1.63461903113459,2.27036141467397,3.45705554687999,1.87457145467037,1.87296046098192,2.2818872861778,2.39117888882882,1.40921398372518,2.26622122115384,1.96631129383148,1.22492502752936,0.491337269247072,2.27316718586684,0,2.71993622206413,1.82032272387605,3.59309070908119,1.0100166837244,0.875829639103749,1.6623846929051,0.877955241761676,1.22595118319608,2.85452311922534,1.47461838108027,0.179389635688862,0.213557388818567,1.48352330811693,0.300091096084402,1.44273540933814,1.03056216018252,1.8611685633159,0.168776332241266,1.16924406193438,0.757301322732344,1.28869858099219,1.45481451136931,1.42003837006646,1.0075209822764,0.67824236924195,0.193260853163297,0.545492241181669,0,0.243947412259191,0.265059536642971,0,1.14027160516907,0.504641701751257,0,0,2.57296375277154,6.90674606762403,1.39310378409594,2.88751792667834,0.709840800239063,0.337169380156203,0,0.55146986366197,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0.769494313892781,2.21446636387394,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0,1.3725424823882,0.109750285408626,0,0.100528972411631,0.0925884451585296,1.95484983186195,1.03993478527958,1.44331342025273,2.08674728955138,1.6437217193015,1.87676382089396,2.31492756288305,2.47330397904978,0,0.858486162094873,2.21595305478658,2.34004265139238,2.52672975890838,0,0,0.283550194484773,0.268675568108545,0.290633938513962,0.766765358330422,0.492663237895943,1.14462964217194,0.829312462163088,0.864719720501769,0.75745460055828,2.22242630022592,2.29193055334967,2.34434894420094,3.4214489204541,2.98199728839638,2.40274446275134,3.42991719156694,1.90622843387113,1.30788020649984,1.1734125731352,1.42198887333556,17.8828222925941,0,1.32969058292435,7.28052058379563,1.80045161983499,0,0.532844358032199,0.57191197463259,0.542621605391443,0,1.95441710576241,1.77695974371273,1.58390374586686,0.904318131178758,0.871533458600294,1.3996218765488,7.29742683847143,3.51579964002488,2.10833939483032,3.83399768786532,1.14861935834114,1.42636905040718,0.868687840005475,1.64381058040307,0.895304816199478,0.336255431980582,0,0,0,3.04913549066956,5.20559415430487,1.54657762555539,0.502548796003046,1.91381625495949,0,0,0.414415513436035,0.736148950314839,1.00034104211935,2.71265023699736,2.70362119990049,1.60586089917446,1.26161932027148,1.28855556491985,3.61135319673263,2.27407504055985,6.2083842775503,0,1.29058417979192,1.47702144595741,7.44044398358414,3.77457766191941,0.413536052245775,0,0.213455115606889,0,0,0,2.23297027036899,0.460385919864187,1.68396056659844,1.92208723883551,1.02341449813341,2.2519548960105,0,1.85051632563187,1.9531789784444,1.64254312027618,1.55776328755086,1.85936605535935,0.241718899183244,0.200506470303285,0.460404944679482,0.91851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| |||
|short_description=p5@C5orf32 | |||
}} |
Revision as of 07:47, 22 January 2014
Short description: | p5@C5orf32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C5orf32_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_NM_032412, uc003lfd.2, uc010jfi.2_5end |
EntrezGene: | C5orf32 |
HGNC: | 30239 |
UniProt: | Q9H1C7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.97e-10 | 121 |
fibroblast | 2.69e-09 | 76 |
smooth muscle cell | 3.10e-08 | 43 |
smooth muscle myoblast | 3.10e-08 | 43 |
muscle cell | 4.14e-08 | 55 |
muscle precursor cell | 1.29e-07 | 58 |
myoblast | 1.29e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.29e-07 | 58 |
electrically responsive cell | 3.33e-07 | 61 |
electrically active cell | 3.33e-07 | 61 |
vascular associated smooth muscle cell | 5.82e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vasculature | 5.83e-14 | 78 |
vascular system | 5.83e-14 | 78 |
circulatory system | 1.46e-11 | 112 |
cardiovascular system | 3.55e-11 | 109 |
vessel | 8.64e-11 | 68 |
dense mesenchyme tissue | 1.30e-10 | 73 |
paraxial mesoderm | 4.05e-10 | 72 |
presumptive paraxial mesoderm | 4.05e-10 | 72 |
somite | 5.38e-10 | 71 |
presomitic mesoderm | 5.38e-10 | 71 |
presumptive segmental plate | 5.38e-10 | 71 |
dermomyotome | 5.38e-10 | 71 |
trunk paraxial mesoderm | 5.38e-10 | 71 |
epithelial vesicle | 8.10e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 7.28e-09 | 83 |
structure with developmental contribution from neural crest | 1.44e-08 | 132 |
epithelial tube open at both ends | 1.64e-08 | 59 |
blood vessel | 1.64e-08 | 59 |
blood vasculature | 1.64e-08 | 59 |
vascular cord | 1.64e-08 | 59 |
artery | 1.65e-08 | 42 |
arterial blood vessel | 1.65e-08 | 42 |
arterial system | 1.65e-08 | 42 |
cell layer | 6.39e-08 | 309 |
multilaminar epithelium | 1.40e-07 | 83 |
epithelium | 1.54e-07 | 306 |
skeletal muscle tissue | 1.73e-07 | 62 |
striated muscle tissue | 1.73e-07 | 62 |
myotome | 1.73e-07 | 62 |
muscle tissue | 2.43e-07 | 64 |
musculature | 2.43e-07 | 64 |
musculature of body | 2.43e-07 | 64 |
tube | 4.52e-07 | 192 |