FFCP PHASE1:Mm9::chr17:50329738..50329814,-: Difference between revisions
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{{FFCP|EntrezGene=76438|HGNC=|MCL_coexpression_id=1599|UniProt=Q6A0D4|association_with_transcript=7bp_to_ENSMUST00000156094,NM_181397,uc008cyr.1,uc008cys.1_5end|description=CAGE_peak_1_at_Rftn1_5end|id=chr17:50329738..50329814,-|ontology_enrichment_celltype=CL:0002320!1.79e-09!46;CL:0000134!1.79e-09!46;CL:0000988!3.46e-09!32;CL:0002032!3.46e-09!32;CL:0000037!3.46e-09!32;CL:0000566!3.46e-09!32;CL:0000837!3.46e-09!32;CL:0000738!1.82e-08!17;CL:0002087!1.82e-08!17;CL:0002031!4.81e-08!25;CL:0000838!2.39e-07!12;CL:0000791!9.03e-07!9;CL:0000789!9.03e-07!9;CL:0002420!9.03e-07!9;CL:0002419!9.03e-07!9;CL:0000790!9.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0002320,1.40e-09,46;CL:0000134,1.40e-09,46;CL:0000988,2.79e-09,32;CL:0002032,2.79e-09,32;CL:0000037,2.79e-09,32;CL:0000837,2.79e-09,32;CL:0000738,1.81e-08,17;CL:0002087,1.81e-08,17;CL:0002031,3.85e-08,25;CL:0000838,2.37e-07,12;CL:0000791,8.97e-07,9;CL:0000789,8.97e-07,9;CL:0002420,8.97e-07,9;CL:0002419,8.97e-07,9;CL:0000790,8.97e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!5.12e-25!88;UBERON:0002193!3.05e-22!48;UBERON:0002390!1.81e-21!45;UBERON:0003061!1.81e-21!45;UBERON:0004177!1.45e-13!29;UBERON:0002405!4.44e-12!70;UBERON:0002370!1.01e-11!23;UBERON:0000974!1.01e-11!23;UBERON:0004807!1.01e-11!23;UBERON:0005058!1.01e-11!23;UBERON:0003351!1.01e-11!23;UBERON:0009113!1.01e-11!23;UBERON:0003295!1.01e-11!23;UBERON:0009722!1.01e-11!23;UBERON:0005562!1.01e-11!23;UBERON:0007690!1.01e-11!23;UBERON:0006562!1.67e-11!24;UBERON:0001557!1.67e-11!24;UBERON:0001042!1.67e-11!24;UBERON:0008814!1.67e-11!24;UBERON:0009145!1.67e-11!24;UBERON:0003408!3.27e-11!24;UBERON:0002384!1.79e-09!46;UBERON:0000065!3.71e-09!41;UBERON:0001004!6.42e-09!42;UBERON:0002371!1.40e-08!16;UBERON:0000926!1.74e-08!193;UBERON:0004120!1.74e-08!193;UBERON:0006603!1.74e-08!193;UBERON:0000072!5.07e-08!27;UBERON:0004872!6.62e-08!33;UBERON:0001474!1.01e-07!22;UBERON:0004765!1.01e-07!22;UBERON:0001434!1.01e-07!22;UBERON:0002204!2.48e-07!32;UBERON:0004535!4.76e-07!23;UBERON:0001009!4.76e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.53e-24,87;UBERON:0002193,2.97e-22,48;UBERON:0002405,2.97e-22,48;UBERON:0002390,1.76e-21,45;UBERON:0003061,1.76e-21,45;UBERON:0000926,5.55e-14,120;UBERON:0004120,5.55e-14,120;UBERON:0006603,5.55e-14,120;UBERON:0004177,1.42e-13,29;UBERON:0005057,1.42e-13,29;UBERON:0002370,9.98e-12,23;UBERON:0000974,9.98e-12,23;UBERON:0004807,9.98e-12,23;UBERON:0005058,9.98e-12,23;UBERON:0003351,9.98e-12,23;UBERON:0009113,9.98e-12,23;UBERON:0003295,9.98e-12,23;UBERON:0009722,9.98e-12,23;UBERON:0005562,9.98e-12,23;UBERON:0007690,9.98e-12,23;UBERON:0006562,1.65e-11,24;UBERON:0001557,1.65e-11,24;UBERON:0001042,1.65e-11,24;UBERON:0008814,1.65e-11,24;UBERON:0009145,1.65e-11,24;UBERON:0003408,3.23e-11,24;UBERON:0000077,1.12e-10,35;UBERON:0002384,1.40e-09,46;UBERON:0000065,3.48e-09,41;UBERON:0001004,6.04e-09,42;UBERON:0002371,1.39e-08,16;UBERON:0000072,4.74e-08,27;UBERON:0004872,6.57e-08,33;UBERON:0001474,1.04e-07,22;UBERON:0004765,1.04e-07,22;UBERON:0001434,1.04e-07,22;UBERON:0002204,2.54e-07,32;UBERON:0004535,4.72e-07,23;UBERON:0001009,4.72e-07,23|phase1_expression=1.76163731815273,0,0,0,0,0.16787927191189,0,44.6766699107854,28.72089931894,35.109678948299,33.90115770865,49.5385107361039,38.3489635045901,42.9234175877277,19.3203661853084,16.4004966585759,4.89693314689703,76.3418440166935,84.3253766675293,61.9608891625124,7.82398269389842,8.83689465687879,7.31359409589019,7.1996590257033,8.48814339948529,0,0,0,0.380046838912748,1.76421090831952,2.43903561720835,0,0,0,0,0,0,2.92972141515835,1.5626706890476,2.09409497589519,0,0.683045484958446,1.45653105909346,11.8343008897043,13.8886395770735,5.32285581268876,4.69434806608824,0.436050312760893,0.659058548203415,1.74986909166855,2.51975558925653,0,116.441128604069,52.2260742248168,30.5845357219642,17.7509010864803,12.6074713573053,13.9231464914909,3.64169629547276,3.70293685490423,8.87363964908651,6.09920157724438,5.33576877666684,130.485459005803,142.396756209644,115.808258736214,43.1424159146503,20.7477884873639,1.14058573539325,1.35005938331691,1.89292465216244,5.71301968807607,6.18431914664518,1.71487118900936,1.82106394934649,1.83843757322004,7.70811166995721,6.63974158042976,7.68032666281217,11.0784481693363,9.97215315266265,7.8137005583514,7.53794097303729,10.6924895906019,12.071061574368,4.12480019663135,6.26435395516053,5.59198337475902,1.36307147999731,1.43585964202892,13.6236309689789,15.487629785665,0,1.07940638327563,2.59910566979068,1.79210754838934,6.03911006566533,21.9855116125695,15.846946280775,18.3736578745377,0.14084341977668,35.931413676009,48.4129955442627,63.9960032837998,0,0.253359865475099,0,5.02409070763864,53.0822661476702,7.86743337043571,4.51061849591953,4.56698217468212,4.84292544237723,2.56228488939458,4.35078216402108,5.40366342717605,5.93267922562497,9.54355755671417,19.4614321428972,12.7795811458453,17.6673214768315,12.6067565815158,0,3.22058876712702,3.35114730901528,7.40825460104915,25.9998820177847,11.9980546198682,16.5191295194984,9.43681028250383,6.40500843946077,1.25654352112864,2.08589184230732,2.30143911597297,7.68815764870372,3.89379031362618,6.00852246716866,11.9430691785689,2.52722758433675,6.94458124425364,3.513251959993,5.28774840196988,3.24111833649629,3.0140963567143,5.03470093719826,3.97152532883034,3.93547243150861,3.10444044886819,1.72454394346274,2.45837904218165,5.63043597324636,3.72632745126877,3.61461423993277,6.268538997399,6.37924622864625,4.17971960318836,13.3420505589515,10.0365683774739,13.3556844715929,5.38527008592305,7.27030785941398,6.12211008967451,9.70653415899362,12.3961466000864,9.2560267732427,10.2314935690179,15.0233104783787,14.7124331382634,16.785104691175,27.4159665012089,30.0765283415125,33.7721970952518,26.7851140655082,27.1096965895951,6.72927835405207,4.11618449517138,4.62586296177317,3.43785736662608,1.91959425481711,2.32236671860439,2.19074684247559,3.02525286935014,4.89231696458715,4.1849637744763,6.16887780007865,4.28217282282428,5.52937459360593,7.16243299348143,7.01870713628832,5.39291645192533,3.8904848977445,2.78797782556114,1.70701110857774,2.97046132785295,4.50830942692322,4.68398054044223,4.26695471768777,6.45249542990931,8.78987866027176,6.05201606716369,8.16393384775149,5.67626954040282,1.1858105083486,2.8363667971736,3.53806191203765,2.47348323623339,3.24576194221605,5.06472035480075,2.80088436959562,3.16465751195892,5.67473293712624,3.29473695825698,7.18841032636773,4.83783231969054,7.80094182786401,5.30415643688935,4.30553792452589,2.8946611281802,18.4753190166605,4.9267767060326,4.56301934037672,5.60158783058121,3.05097322775053,7.03526281255626,5.47500374037832,11.5128852236101,13.0837169608139,14.3952048271704,17.6994793209811,16.5501947862895,14.3328534948693,15.4774492682217,63.3323392544944,45.1441717569529,10.3270497333998,8.00216564283724,9.31193421929193,7.14991288212439,0.163934945376675,21.9649706667804,2.52406575533005,2.34263246577983,0.861693590931196,4.77937595905104,2.22798674082394,5.37845408498782,6.07216052512342,4.67609372658099,5.53402889125133,2.57057053137446,9.22610553853746,6.7664929393557,7.16702621155735,10.3931177472697,5.30980553359851,2.6705869977048,0.906970670894253,2.64047111658257,3.54362271456927,8.30074899448604,10.3371317267288,6.18007340111759,10.3384239731569,8.21695570633122,8.4334886859999,5.15677716240934,3.40439605753788,3.06103859853227,3.23396709456886,4.71541477069503,2.48276327099183,4.99432689285798,5.26556865926787,3.95804433848979,1.40803024838226,4.87213762986786,3.30792597082443,7.25499512942512,5.9741837877485,6.45348296731268,4.8942661041286,8.37118588699812,6.70405924248657,9.27126510052548,22.3840853845187,8.87463532241857,8.70414278637645,11.4904758772862,19.1371918809435,21.5051482814131,21.2473037492319,22.5321838241089,21.0063960182724,3.81868247206045,2.53068794864908,1.62655573701479,3.24016022465404,3.3454127362315,4.58561383866973,4.45052343069908,4.46328660916814,7.0674104335688,5.05498395837992,4.97071450469541,0,2.39226473670366,1.65458490457098,3.88902376688095,2.97067593998782,3.71703476079712,2.58185925020659,4.6873578543822,4.61381115473128,2.41584120826006,4.03242008761012,28.7570119771642,7.09538253515575,8.21687657318618,9.87398254631242,12.3528420010562,18.8747287042202,23.077526307834,21.7103604946629,18.1739609906666,19.432735697025,20.7701941381891,21.635649524225,22.8984183103984,22.5572421210428,6.34845074122592,0.443971906748129,0.179427713218951,0.335769232728157,5.79568782096571,10.1348536743638,6.22715522508701,2.78678892802786,2.00628841614145,4.51801474093653,2.76195141904306,0.572895513439397,2.40594455281163,1.37016503954128,1.5107877947794,4.05013500139084,1.35096360967266,2.26571204492102,1.55328093525546,1.14166082342594,4.78829848081237,4.78054096111576,3.40349403895612,2.30574478890781,3.49302666055027,6.22290837844523,6.38708677440572,7.70206103020357,4.04315538822076,6.33698249725599,5.28153755881013,5.52484894072306,6.59459069770154,6.14559517825062,4.76293691283074,6.72129090480162,8.48800570040302,5.35711671044299,5.5935589651071,6.17164654293748,6.56660482789549,6.91464950847231,6.39524233182245,5.17601592284318,5.66917872874233,3.84148743032822,7.3659519202596,6.3827933507555,7.85599180320834,5.57584585183618,7.68334962529395,9.41231399290286,5.42278944150881,4.62975866354739,8.74337022782811,7.71974307869848,9.02458427002853,7.26895661861605,14.7796250810075,16.6944841646703|short_description=p1@Rftn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76438 | |||
|HGNC= | |||
|MCL_coexpression_id=1599 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6A0D4 | |||
|association_with_transcript=7bp_to_ENSMUST00000156094,NM_181397,uc008cyr.1,uc008cys.1_5end | |||
|cluster_id=chr17:50329738..50329814,- | |||
|description=CAGE_peak_1_at_Rftn1_5end | |||
|id=chr17:50329738..50329814,- | |||
|ontology_enrichment_celltype=CL:0002320!1.79e-09!46;CL:0000134!1.79e-09!46;CL:0000988!3.46e-09!32;CL:0002032!3.46e-09!32;CL:0000037!3.46e-09!32;CL:0000566!3.46e-09!32;CL:0000837!3.46e-09!32;CL:0000738!1.82e-08!17;CL:0002087!1.82e-08!17;CL:0002031!4.81e-08!25;CL:0000838!2.39e-07!12;CL:0000791!9.03e-07!9;CL:0000789!9.03e-07!9;CL:0002420!9.03e-07!9;CL:0002419!9.03e-07!9;CL:0000790!9.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.40e-09,46;CL:0000134,1.40e-09,46;CL:0000988,2.79e-09,32;CL:0002032,2.79e-09,32;CL:0000037,2.79e-09,32;CL:0000837,2.79e-09,32;CL:0000738,1.81e-08,17;CL:0002087,1.81e-08,17;CL:0002031,3.85e-08,25;CL:0000838,2.37e-07,12;CL:0000791,8.97e-07,9;CL:0000789,8.97e-07,9;CL:0002420,8.97e-07,9;CL:0002419,8.97e-07,9;CL:0000790,8.97e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.12e-25!88;UBERON:0002193!3.05e-22!48;UBERON:0002390!1.81e-21!45;UBERON:0003061!1.81e-21!45;UBERON:0004177!1.45e-13!29;UBERON:0002405!4.44e-12!70;UBERON:0002370!1.01e-11!23;UBERON:0000974!1.01e-11!23;UBERON:0004807!1.01e-11!23;UBERON:0005058!1.01e-11!23;UBERON:0003351!1.01e-11!23;UBERON:0009113!1.01e-11!23;UBERON:0003295!1.01e-11!23;UBERON:0009722!1.01e-11!23;UBERON:0005562!1.01e-11!23;UBERON:0007690!1.01e-11!23;UBERON:0006562!1.67e-11!24;UBERON:0001557!1.67e-11!24;UBERON:0001042!1.67e-11!24;UBERON:0008814!1.67e-11!24;UBERON:0009145!1.67e-11!24;UBERON:0003408!3.27e-11!24;UBERON:0002384!1.79e-09!46;UBERON:0000065!3.71e-09!41;UBERON:0001004!6.42e-09!42;UBERON:0002371!1.40e-08!16;UBERON:0000926!1.74e-08!193;UBERON:0004120!1.74e-08!193;UBERON:0006603!1.74e-08!193;UBERON:0000072!5.07e-08!27;UBERON:0004872!6.62e-08!33;UBERON:0001474!1.01e-07!22;UBERON:0004765!1.01e-07!22;UBERON:0001434!1.01e-07!22;UBERON:0002204!2.48e-07!32;UBERON:0004535!4.76e-07!23;UBERON:0001009!4.76e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.53e-24,87;UBERON:0002193,2.97e-22,48;UBERON:0002405,2.97e-22,48;UBERON:0002390,1.76e-21,45;UBERON:0003061,1.76e-21,45;UBERON:0000926,5.55e-14,120;UBERON:0004120,5.55e-14,120;UBERON:0006603,5.55e-14,120;UBERON:0004177,1.42e-13,29;UBERON:0005057,1.42e-13,29;UBERON:0002370,9.98e-12,23;UBERON:0000974,9.98e-12,23;UBERON:0004807,9.98e-12,23;UBERON:0005058,9.98e-12,23;UBERON:0003351,9.98e-12,23;UBERON:0009113,9.98e-12,23;UBERON:0003295,9.98e-12,23;UBERON:0009722,9.98e-12,23;UBERON:0005562,9.98e-12,23;UBERON:0007690,9.98e-12,23;UBERON:0006562,1.65e-11,24;UBERON:0001557,1.65e-11,24;UBERON:0001042,1.65e-11,24;UBERON:0008814,1.65e-11,24;UBERON:0009145,1.65e-11,24;UBERON:0003408,3.23e-11,24;UBERON:0000077,1.12e-10,35;UBERON:0002384,1.40e-09,46;UBERON:0000065,3.48e-09,41;UBERON:0001004,6.04e-09,42;UBERON:0002371,1.39e-08,16;UBERON:0000072,4.74e-08,27;UBERON:0004872,6.57e-08,33;UBERON:0001474,1.04e-07,22;UBERON:0004765,1.04e-07,22;UBERON:0001434,1.04e-07,22;UBERON:0002204,2.54e-07,32;UBERON:0004535,4.72e-07,23;UBERON:0001009,4.72e-07,23 | |||
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| |||
|short_description=p1@Rftn1 | |||
}} |
Revision as of 01:44, 5 August 2015
Short description: | p1@Rftn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rftn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1599 |
Association with transcript: | 7bp_to_ENSMUST00000156094, NM_181397, uc008cyr.1, uc008cys.1_5end |
EntrezGene: | 76438 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.40e-09 | 46 |
mesenchymal cell | 1.40e-09 | 46 |
hematopoietic cell | 2.79e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.79e-09 | 32 |
hematopoietic stem cell | 2.79e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.79e-09 | 32 |
leukocyte | 1.81e-08 | 17 |
nongranular leukocyte | 1.81e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 3.85e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.37e-07 | 12 |
mature alpha-beta T cell | 8.97e-07 | 9 |
alpha-beta T cell | 8.97e-07 | 9 |
immature T cell | 8.97e-07 | 9 |
mature T cell | 8.97e-07 | 9 |
immature alpha-beta T cell | 8.97e-07 | 9 |