FFCP PHASE1:Mm9::chr18:32109348..32109364,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=574402|HGNC=|MCL_coexpression_id=107|UniProt=Q6NS65|association_with_transcript=-58bp_to_ENSMUST00000064016,NM_001025381,uc008eiw.2_5end|description=CAGE_peak_4_at_Gpr17_5end|id=chr18:32109348..32109364,-|ontology_enrichment_celltype=CL:0000540!7.20e-11!33;CL:0000047!7.20e-11!33;CL:0000031!7.20e-11!33;CL:0000404!7.20e-11!33;CL:0000107!1.45e-09!9;CL:0002319!4.24e-08!43;CL:0000393!9.06e-08!39;CL:0000211!9.06e-08!39;CL:0000221!1.06e-07!44;CL:0000133!1.06e-07!44|ontology_enrichment_celltype_v019_2=CL:0000107,1.16e-27,9;CL:0000540,4.77e-18,33;CL:0000047,4.77e-18,33;CL:0000031,4.77e-18,33;CL:0000404,4.77e-18,33;CL:0002319,4.22e-17,43;CL:0000221,1.26e-16,44;CL:0000133,1.26e-16,44;CL:0000393,9.16e-15,39;CL:0000211,9.16e-15,39;CL:0002321,4.48e-09,70;CL:0002611,2.01e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.73e-15!73;UBERON:0005743!8.73e-15!73;UBERON:0000073!6.61e-14!75;UBERON:0001016!6.61e-14!75;UBERON:0004121!4.68e-13!102;UBERON:0000924!4.68e-13!102;UBERON:0006601!4.68e-13!102;UBERON:0002346!1.97e-10!71;UBERON:0003075!1.97e-10!71;UBERON:0007284!1.97e-10!71;UBERON:0002410!1.45e-09!9;UBERON:0001049!1.85e-07!52;UBERON:0005068!1.85e-07!52;UBERON:0006241!1.85e-07!52;UBERON:0007135!1.85e-07!52;UBERON:0000010!3.84e-07!11;UBERON:0002020!7.13e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.16e-27,9;UBERON:0000010,2.51e-22,11;UBERON:0001017,5.19e-21,73;UBERON:0001016,2.58e-20,75;UBERON:0004121,5.87e-15,95;UBERON:0000924,5.87e-15,95;UBERON:0006601,5.87e-15,95;UBERON:0000011,1.33e-10,3;UBERON:0010313,3.56e-10,3;UBERON:0002342,3.56e-10,3;UBERON:0002005,3.56e-10,3;UBERON:0005428,3.56e-10,3;UBERON:0005062,3.56e-10,3;UBERON:0000013,4.38e-10,3;UBERON:0001948,4.42e-10,5;UBERON:0002315,4.42e-10,5;UBERON:0002021,7.14e-10,10;UBERON:0000411,7.14e-10,10;UBERON:0001950,7.14e-10,10;UBERON:0002346,1.44e-08,64;UBERON:0003075,1.44e-08,64;UBERON:0007284,1.44e-08,64;UBERON:0002240,2.11e-08,6;UBERON:0005174,2.11e-08,6;UBERON:0001137,2.11e-08,6;UBERON:0002020,2.16e-08,34;UBERON:0002256,2.01e-07,2;UBERON:0010371,4.19e-07,73;UBERON:0001049,6.07e-07,52;UBERON:0005068,6.07e-07,52;UBERON:0006241,6.07e-07,52;UBERON:0007135,6.07e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0.633831403506179,0,0,0,0,0,1.79760066311043,1.92109152660777,0,0,0.420649922702764,5.99867067247988,4.41737081903227,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.46081959976873,0,0.0914876436024097,0,0.837548997004143,1.68828783009504,0.61119299110724,1.76777151284201,2.56269025438385,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0.913396434936424,0,0.60289056221049,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.376963056338593,0,1.53429274398198,0.41557608911912,2.10913641988085,0,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0,0,0,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0.667134131534611,0.760902504450237,0,0.494096864172033,0.251335208800269,0.795825888164603,0.38992817423824,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,2.22702204525186,0,0,2.83957397474631,3.90438744296638,8.18608911384636,5.73525115086125,11.3627323782021,11.889214293131,2.42886421004937,3.50707029493574,9.09161889277004,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.188605079755898,1.18120757152309,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0.228778173206523,0,0,0,0,0.632671987162271,0.813277868507395,0.86404272657441,0.418176592028937,1.09181281873089,0.404593039154462,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.76195141904306,2.86447756719698,1.20297227640581,1.37016503954128,2.2661816921691,0,0.900642406448441,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.888986911206461,0,0,0,1.2673964994512,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,1.43061713968393,0.290692833264657,0.282328141245992,0.338458431566706,0,0.526139422875686,0.407412341537585,1.12228454331548,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0.695603506861264|short_description=p4@Gpr17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:574402 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NS65 | |||
|association_with_transcript=-58bp_to_ENSMUST00000064016,NM_001025381,uc008eiw.2_5end | |||
|cluster_id=chr18:32109348..32109364,- | |||
|description=CAGE_peak_4_at_Gpr17_5end | |||
|id=chr18:32109348..32109364,- | |||
|ontology_enrichment_celltype=CL:0000540!7.20e-11!33;CL:0000047!7.20e-11!33;CL:0000031!7.20e-11!33;CL:0000404!7.20e-11!33;CL:0000107!1.45e-09!9;CL:0002319!4.24e-08!43;CL:0000393!9.06e-08!39;CL:0000211!9.06e-08!39;CL:0000221!1.06e-07!44;CL:0000133!1.06e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.16e-27,9;CL:0000540,4.77e-18,33;CL:0000047,4.77e-18,33;CL:0000031,4.77e-18,33;CL:0000404,4.77e-18,33;CL:0002319,4.22e-17,43;CL:0000221,1.26e-16,44;CL:0000133,1.26e-16,44;CL:0000393,9.16e-15,39;CL:0000211,9.16e-15,39;CL:0002321,4.48e-09,70;CL:0002611,2.01e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.73e-15!73;UBERON:0005743!8.73e-15!73;UBERON:0000073!6.61e-14!75;UBERON:0001016!6.61e-14!75;UBERON:0004121!4.68e-13!102;UBERON:0000924!4.68e-13!102;UBERON:0006601!4.68e-13!102;UBERON:0002346!1.97e-10!71;UBERON:0003075!1.97e-10!71;UBERON:0007284!1.97e-10!71;UBERON:0002410!1.45e-09!9;UBERON:0001049!1.85e-07!52;UBERON:0005068!1.85e-07!52;UBERON:0006241!1.85e-07!52;UBERON:0007135!1.85e-07!52;UBERON:0000010!3.84e-07!11;UBERON:0002020!7.13e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.16e-27,9;UBERON:0000010,2.51e-22,11;UBERON:0001017,5.19e-21,73;UBERON:0001016,2.58e-20,75;UBERON:0004121,5.87e-15,95;UBERON:0000924,5.87e-15,95;UBERON:0006601,5.87e-15,95;UBERON:0000011,1.33e-10,3;UBERON:0010313,3.56e-10,3;UBERON:0002342,3.56e-10,3;UBERON:0002005,3.56e-10,3;UBERON:0005428,3.56e-10,3;UBERON:0005062,3.56e-10,3;UBERON:0000013,4.38e-10,3;UBERON:0001948,4.42e-10,5;UBERON:0002315,4.42e-10,5;UBERON:0002021,7.14e-10,10;UBERON:0000411,7.14e-10,10;UBERON:0001950,7.14e-10,10;UBERON:0002346,1.44e-08,64;UBERON:0003075,1.44e-08,64;UBERON:0007284,1.44e-08,64;UBERON:0002240,2.11e-08,6;UBERON:0005174,2.11e-08,6;UBERON:0001137,2.11e-08,6;UBERON:0002020,2.16e-08,34;UBERON:0002256,2.01e-07,2;UBERON:0010371,4.19e-07,73;UBERON:0001049,6.07e-07,52;UBERON:0005068,6.07e-07,52;UBERON:0006241,6.07e-07,52;UBERON:0007135,6.07e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0.633831403506179,0,0,0,0,0,1.79760066311043,1.92109152660777,0,0,0.420649922702764,5.99867067247988,4.41737081903227,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.46081959976873,0,0.0914876436024097,0,0.837548997004143,1.68828783009504,0.61119299110724,1.76777151284201,2.56269025438385,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0.913396434936424,0,0.60289056221049,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.376963056338593,0,1.53429274398198,0.41557608911912,2.10913641988085,0,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0,0,0,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0.667134131534611,0.760902504450237,0,0.494096864172033,0.251335208800269,0.795825888164603,0.38992817423824,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,2.22702204525186,0,0,2.83957397474631,3.90438744296638,8.18608911384636,5.73525115086125,11.3627323782021,11.889214293131,2.42886421004937,3.50707029493574,9.09161889277004,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.188605079755898,1.18120757152309,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0.228778173206523,0,0,0,0,0.632671987162271,0.813277868507395,0.86404272657441,0.418176592028937,1.09181281873089,0.404593039154462,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.76195141904306,2.86447756719698,1.20297227640581,1.37016503954128,2.2661816921691,0,0.900642406448441,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.888986911206461,0,0,0,1.2673964994512,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,1.43061713968393,0.290692833264657,0.282328141245992,0.338458431566706,0,0.526139422875686,0.407412341537585,1.12228454331548,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0.695603506861264 | |||
|short_description=p4@Gpr17 | |||
}} |
Revision as of 15:15, 5 August 2015
Short description: | p4@Gpr17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gpr17_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -58bp_to_ENSMUST00000064016, NM_001025381, uc008eiw.2_5end |
EntrezGene: | 574402 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.16e-27 | 9 |
neuron | 4.77e-18 | 33 |
neuronal stem cell | 4.77e-18 | 33 |
neuroblast | 4.77e-18 | 33 |
electrically signaling cell | 4.77e-18 | 33 |
neural cell | 4.22e-17 | 43 |
ectodermal cell | 1.26e-16 | 44 |
neurectodermal cell | 1.26e-16 | 44 |
electrically responsive cell | 9.16e-15 | 39 |
electrically active cell | 9.16e-15 | 39 |
embryonic cell | 4.48e-09 | 70 |
neuron of the dorsal spinal cord | 2.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.16e-27 | 9 |
peripheral nervous system | 2.51e-22 | 11 |
central nervous system | 5.19e-21 | 73 |
nervous system | 2.58e-20 | 75 |
ectoderm-derived structure | 5.87e-15 | 95 |
ectoderm | 5.87e-15 | 95 |
presumptive ectoderm | 5.87e-15 | 95 |
parasympathetic nervous system | 1.33e-10 | 3 |
neural crest-derived structure | 3.56e-10 | 3 |
neural crest | 3.56e-10 | 3 |
enteric nervous system | 3.56e-10 | 3 |
vagal neural crest | 3.56e-10 | 3 |
neural fold | 3.56e-10 | 3 |
sympathetic nervous system | 4.38e-10 | 3 |
regional part of spinal cord | 4.42e-10 | 5 |
gray matter of spinal cord | 4.42e-10 | 5 |
occipital lobe | 7.14e-10 | 10 |
visual cortex | 7.14e-10 | 10 |
neocortex | 7.14e-10 | 10 |
neurectoderm | 1.44e-08 | 64 |
neural plate | 1.44e-08 | 64 |
presumptive neural plate | 1.44e-08 | 64 |
spinal cord | 2.11e-08 | 6 |
dorsal region element | 2.11e-08 | 6 |
dorsum | 2.11e-08 | 6 |
gray matter | 2.16e-08 | 34 |
dorsal horn of spinal cord | 2.01e-07 | 2 |
ecto-epithelium | 4.19e-07 | 73 |
neural tube | 6.07e-07 | 52 |
neural rod | 6.07e-07 | 52 |
future spinal cord | 6.07e-07 | 52 |
neural keel | 6.07e-07 | 52 |