FFCP PHASE1:Mm9::chr19:36994096..36994112,-: Difference between revisions
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{{FFCP|EntrezGene=72514|HGNC=|MCL_coexpression_id=2150|UniProt=Q1HCM0|association_with_transcript=0bp_to_ENSMUST00000057337_5end|description=CAGE_peak_2_at_Fgfbp3_5end|id=chr19:36994096..36994112,-|ontology_enrichment_celltype=CL:0000055!3.29e-11!50;CL:0002319!7.79e-11!43;CL:0000221!3.00e-10!44;CL:0000133!3.00e-10!44;CL:0000117!5.16e-10!23;CL:0000337!5.16e-10!23;CL:0000393!5.15e-08!39;CL:0000211!5.15e-08!39;CL:0000540!4.13e-07!33;CL:0000047!4.13e-07!33;CL:0000031!4.13e-07!33;CL:0000404!4.13e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-17,23;CL:0000337,1.10e-17,23;CL:0002319,1.16e-17,43;CL:0000221,4.35e-17,44;CL:0000133,4.35e-17,44;CL:0002321,6.69e-11,70;CL:0000540,8.96e-11,33;CL:0000047,8.96e-11,33;CL:0000031,8.96e-11,33;CL:0000404,8.96e-11,33;CL:0002609,2.00e-10,6;CL:0000393,1.66e-09,39;CL:0000211,1.66e-09,39;CL:0000333,1.33e-08,10;CL:0000095,1.33e-08,10;CL:0000243,1.33e-08,10;CL:0000123,1.33e-08,10;CL:0000125,1.33e-08,10;CL:0000030,1.33e-08,10;CL:0000339,1.33e-08,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.98e-11!34;UBERON:0000073!6.12e-11!75;UBERON:0001016!6.12e-11!75;UBERON:0001017!5.34e-10!73;UBERON:0005743!5.34e-10!73;UBERON:0004121!5.79e-09!102;UBERON:0000924!5.79e-09!102;UBERON:0006601!5.79e-09!102;UBERON:0002791!8.23e-09!29;UBERON:0003528!8.23e-09!29;UBERON:0001893!8.23e-09!29;UBERON:0001049!2.37e-08!52;UBERON:0005068!2.37e-08!52;UBERON:0006241!2.37e-08!52;UBERON:0007135!2.37e-08!52;UBERON:0003056!3.97e-08!49;UBERON:0002346!1.74e-07!71;UBERON:0003075!1.74e-07!71;UBERON:0007284!1.74e-07!71;UBERON:0002780!3.77e-07!39;UBERON:0001890!3.77e-07!39;UBERON:0006240!3.77e-07!39;UBERON:0000956!4.39e-07!21;UBERON:0001869!4.39e-07!21;UBERON:0000203!4.39e-07!21;UBERON:0003080!4.39e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.38e-15,34;UBERON:0001016,1.82e-13,75;UBERON:0001017,6.85e-12,73;UBERON:0003528,8.71e-12,29;UBERON:0002791,8.71e-12,29;UBERON:0001893,8.71e-12,29;UBERON:0004121,1.68e-10,95;UBERON:0000924,1.68e-10,95;UBERON:0006601,1.68e-10,95;UBERON:0001049,4.36e-09,52;UBERON:0005068,4.36e-09,52;UBERON:0006241,4.36e-09,52;UBERON:0007135,4.36e-09,52;UBERON:0000073,1.57e-08,54;UBERON:0000956,4.14e-08,21;UBERON:0001869,4.14e-08,21;UBERON:0000203,4.14e-08,21;UBERON:0002346,5.55e-08,64;UBERON:0003075,5.55e-08,64;UBERON:0007284,5.55e-08,64;UBERON:0001954,1.26e-07,7;UBERON:0003022,1.26e-07,7;UBERON:0002421,1.26e-07,7;UBERON:0000349,1.26e-07,7;UBERON:0002600,1.26e-07,7;UBERON:0002780,1.39e-07,39;UBERON:0001890,1.39e-07,39;UBERON:0006240,1.39e-07,39;UBERON:0000955,2.47e-07,47;UBERON:0006238,2.47e-07,47;UBERON:0003080,2.76e-07,40;UBERON:0003056,7.36e-07,49|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.985521055061667,0.70219357896598,0,0.0797721589953364,0,0.0874204024189974,0.666219523631325,0.202475267389826,0.699561878128147,0,0,0.42438965179803,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,3.69038872550742,0,0,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,8.93903141159831,1.31811709640683,0.388859798148567,3.07970127575798,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,31.9660008158165,30.6814767977779,36.1283899998522,0,0.889294796111139,0,0.988866362566974,0,1.49800055259202,2.30530983192933,10.4726508431562,15.3906769698127,11.1472229516232,1.71390590642282,0.883474163806454,13.35149711443,10.7346927540425,14.7075005857603,0,0.127687338085188,0,15.4306956644327,15.4614117688072,16.1483144872596,0,1.12552522006336,0.30559649555362,2.06240009831567,1.28134512719193,43.2446714314697,1.51452386666368,2.34271836331035,0,0,0,0,0,0,0,0.170430322578058,1.29893002301434,0,0,5.13305909657271,0,0,0.432982082022428,1.52015919285059,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0.254140454146129,0.149790639404823,0,12.6910895633993,0.695297280769106,0.255715457330331,0.41557608911912,0.811206315338788,0,0.124406970610093,0,0,0.390361328888111,2.29902104433473,2.34080768746954,0.753524089178575,0.476255494059295,0.512454881139399,0.374806898238915,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.05144974282064,3.2929475961371,0,0,0,0,0.38660238396628,0,0.889512175379481,0.570676878337677,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.667380422864376,0.786235980452812,0.674586337154561,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0.292255857911312,0,1.28528526568723,0.283880170416537,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0.428674070063185,0,0,0,0,1.40803024838226,0.847328283455281,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0,0.370850604021019,0,0,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.665957860122194,1.07656627931371,3.02192309455341,0,0.93841237725591,0,0.214368379079066,0,1.6942555278512,0.920650473014354,0,0.343706364687375,2.05524755931193,0,0,0.45032120322422,0.453142408984205,1.03552062350364,2.38710899443606,6.3843979744165,4.09760653809922,1.21553358534147,1.04806581313991,0.735374033800057,0.888986911206461,1.64828045791115,0.962757628775446,1.01078884705519,1.2673964994512,1.32038438970253,0.749132059759059,1.08842759088278,1.14870937911227,0.952587382566147,0.463537303779422,0.964546102318525,0.412085900803307,1.17759136107518,1.02860775715625,1.06485483695602,1.43061713968393,1.16277133305863,1.31753132581463,1.26921911837515,0.548783918618318,0.263069711437843,1.08643291076689,0.561142271657738,0.593175090620871,0.788035859004508,0.409231043169689,1.70430525304563,0.385813221962283,4.74640098082097,0.701794825336225,0.644613162144895,0.382576664137687,0.220591419119515,0|short_description=p2@Fgfbp3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72514 | |||
|HGNC= | |||
|MCL_coexpression_id=2150 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q1HCM0 | |||
|association_with_transcript=0bp_to_ENSMUST00000057337_5end | |||
|cluster_id=chr19:36994096..36994112,- | |||
|description=CAGE_peak_2_at_Fgfbp3_5end | |||
|id=chr19:36994096..36994112,- | |||
|ontology_enrichment_celltype=CL:0000055!3.29e-11!50;CL:0002319!7.79e-11!43;CL:0000221!3.00e-10!44;CL:0000133!3.00e-10!44;CL:0000117!5.16e-10!23;CL:0000337!5.16e-10!23;CL:0000393!5.15e-08!39;CL:0000211!5.15e-08!39;CL:0000540!4.13e-07!33;CL:0000047!4.13e-07!33;CL:0000031!4.13e-07!33;CL:0000404!4.13e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-17,23;CL:0000337,1.10e-17,23;CL:0002319,1.16e-17,43;CL:0000221,4.35e-17,44;CL:0000133,4.35e-17,44;CL:0002321,6.69e-11,70;CL:0000540,8.96e-11,33;CL:0000047,8.96e-11,33;CL:0000031,8.96e-11,33;CL:0000404,8.96e-11,33;CL:0002609,2.00e-10,6;CL:0000393,1.66e-09,39;CL:0000211,1.66e-09,39;CL:0000333,1.33e-08,10;CL:0000095,1.33e-08,10;CL:0000243,1.33e-08,10;CL:0000123,1.33e-08,10;CL:0000125,1.33e-08,10;CL:0000030,1.33e-08,10;CL:0000339,1.33e-08,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.98e-11!34;UBERON:0000073!6.12e-11!75;UBERON:0001016!6.12e-11!75;UBERON:0001017!5.34e-10!73;UBERON:0005743!5.34e-10!73;UBERON:0004121!5.79e-09!102;UBERON:0000924!5.79e-09!102;UBERON:0006601!5.79e-09!102;UBERON:0002791!8.23e-09!29;UBERON:0003528!8.23e-09!29;UBERON:0001893!8.23e-09!29;UBERON:0001049!2.37e-08!52;UBERON:0005068!2.37e-08!52;UBERON:0006241!2.37e-08!52;UBERON:0007135!2.37e-08!52;UBERON:0003056!3.97e-08!49;UBERON:0002346!1.74e-07!71;UBERON:0003075!1.74e-07!71;UBERON:0007284!1.74e-07!71;UBERON:0002780!3.77e-07!39;UBERON:0001890!3.77e-07!39;UBERON:0006240!3.77e-07!39;UBERON:0000956!4.39e-07!21;UBERON:0001869!4.39e-07!21;UBERON:0000203!4.39e-07!21;UBERON:0003080!4.39e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.38e-15,34;UBERON:0001016,1.82e-13,75;UBERON:0001017,6.85e-12,73;UBERON:0003528,8.71e-12,29;UBERON:0002791,8.71e-12,29;UBERON:0001893,8.71e-12,29;UBERON:0004121,1.68e-10,95;UBERON:0000924,1.68e-10,95;UBERON:0006601,1.68e-10,95;UBERON:0001049,4.36e-09,52;UBERON:0005068,4.36e-09,52;UBERON:0006241,4.36e-09,52;UBERON:0007135,4.36e-09,52;UBERON:0000073,1.57e-08,54;UBERON:0000956,4.14e-08,21;UBERON:0001869,4.14e-08,21;UBERON:0000203,4.14e-08,21;UBERON:0002346,5.55e-08,64;UBERON:0003075,5.55e-08,64;UBERON:0007284,5.55e-08,64;UBERON:0001954,1.26e-07,7;UBERON:0003022,1.26e-07,7;UBERON:0002421,1.26e-07,7;UBERON:0000349,1.26e-07,7;UBERON:0002600,1.26e-07,7;UBERON:0002780,1.39e-07,39;UBERON:0001890,1.39e-07,39;UBERON:0006240,1.39e-07,39;UBERON:0000955,2.47e-07,47;UBERON:0006238,2.47e-07,47;UBERON:0003080,2.76e-07,40;UBERON:0003056,7.36e-07,49 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.985521055061667,0.70219357896598,0,0.0797721589953364,0,0.0874204024189974,0.666219523631325,0.202475267389826,0.699561878128147,0,0,0.42438965179803,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,3.69038872550742,0,0,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,8.93903141159831,1.31811709640683,0.388859798148567,3.07970127575798,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,31.9660008158165,30.6814767977779,36.1283899998522,0,0.889294796111139,0,0.988866362566974,0,1.49800055259202,2.30530983192933,10.4726508431562,15.3906769698127,11.1472229516232,1.71390590642282,0.883474163806454,13.35149711443,10.7346927540425,14.7075005857603,0,0.127687338085188,0,15.4306956644327,15.4614117688072,16.1483144872596,0,1.12552522006336,0.30559649555362,2.06240009831567,1.28134512719193,43.2446714314697,1.51452386666368,2.34271836331035,0,0,0,0,0,0,0,0.170430322578058,1.29893002301434,0,0,5.13305909657271,0,0,0.432982082022428,1.52015919285059,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0.254140454146129,0.149790639404823,0,12.6910895633993,0.695297280769106,0.255715457330331,0.41557608911912,0.811206315338788,0,0.124406970610093,0,0,0.390361328888111,2.29902104433473,2.34080768746954,0.753524089178575,0.476255494059295,0.512454881139399,0.374806898238915,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.05144974282064,3.2929475961371,0,0,0,0,0.38660238396628,0,0.889512175379481,0.570676878337677,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.667380422864376,0.786235980452812,0.674586337154561,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0.292255857911312,0,1.28528526568723,0.283880170416537,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0.428674070063185,0,0,0,0,1.40803024838226,0.847328283455281,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0,0.370850604021019,0,0,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.665957860122194,1.07656627931371,3.02192309455341,0,0.93841237725591,0,0.214368379079066,0,1.6942555278512,0.920650473014354,0,0.343706364687375,2.05524755931193,0,0,0.45032120322422,0.453142408984205,1.03552062350364,2.38710899443606,6.3843979744165,4.09760653809922,1.21553358534147,1.04806581313991,0.735374033800057,0.888986911206461,1.64828045791115,0.962757628775446,1.01078884705519,1.2673964994512,1.32038438970253,0.749132059759059,1.08842759088278,1.14870937911227,0.952587382566147,0.463537303779422,0.964546102318525,0.412085900803307,1.17759136107518,1.02860775715625,1.06485483695602,1.43061713968393,1.16277133305863,1.31753132581463,1.26921911837515,0.548783918618318,0.263069711437843,1.08643291076689,0.561142271657738,0.593175090620871,0.788035859004508,0.409231043169689,1.70430525304563,0.385813221962283,4.74640098082097,0.701794825336225,0.644613162144895,0.382576664137687,0.220591419119515,0 | |||
|short_description=p2@Fgfbp3 | |||
}} |
Revision as of 23:49, 3 August 2015
Short description: | p2@Fgfbp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fgfbp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2150 |
Association with transcript: | 0bp_to_ENSMUST00000057337_5end |
EntrezGene: | 72514 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.10e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-17 | 23 |
neural cell | 1.16e-17 | 43 |
ectodermal cell | 4.35e-17 | 44 |
neurectodermal cell | 4.35e-17 | 44 |
embryonic cell | 6.69e-11 | 70 |
neuron | 8.96e-11 | 33 |
neuronal stem cell | 8.96e-11 | 33 |
neuroblast | 8.96e-11 | 33 |
electrically signaling cell | 8.96e-11 | 33 |
neuron of cerebral cortex | 2.00e-10 | 6 |
electrically responsive cell | 1.66e-09 | 39 |
electrically active cell | 1.66e-09 | 39 |
migratory neural crest cell | 1.33e-08 | 10 |
neuron associated cell | 1.33e-08 | 10 |
glial cell (sensu Vertebrata) | 1.33e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.33e-08 | 10 |
glial cell | 1.33e-08 | 10 |
glioblast | 1.33e-08 | 10 |
glioblast (sensu Vertebrata) | 1.33e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.38e-15 | 34 |
nervous system | 1.82e-13 | 75 |
central nervous system | 6.85e-12 | 73 |
brain grey matter | 8.71e-12 | 29 |
regional part of telencephalon | 8.71e-12 | 29 |
telencephalon | 8.71e-12 | 29 |
ectoderm-derived structure | 1.68e-10 | 95 |
ectoderm | 1.68e-10 | 95 |
presumptive ectoderm | 1.68e-10 | 95 |
neural tube | 4.36e-09 | 52 |
neural rod | 4.36e-09 | 52 |
future spinal cord | 4.36e-09 | 52 |
neural keel | 4.36e-09 | 52 |
regional part of nervous system | 1.57e-08 | 54 |
cerebral cortex | 4.14e-08 | 21 |
cerebral hemisphere | 4.14e-08 | 21 |
pallium | 4.14e-08 | 21 |
neurectoderm | 5.55e-08 | 64 |
neural plate | 5.55e-08 | 64 |
presumptive neural plate | 5.55e-08 | 64 |
Ammon's horn | 1.26e-07 | 7 |
lobe parts of cerebral cortex | 1.26e-07 | 7 |
hippocampal formation | 1.26e-07 | 7 |
limbic system | 1.26e-07 | 7 |
limbic lobe | 1.26e-07 | 7 |
regional part of forebrain | 1.39e-07 | 39 |
forebrain | 1.39e-07 | 39 |
future forebrain | 1.39e-07 | 39 |
brain | 2.47e-07 | 47 |
future brain | 2.47e-07 | 47 |
anterior neural tube | 2.76e-07 | 40 |
pre-chordal neural plate | 7.36e-07 | 49 |