FFCP PHASE1:Mm9::chr1:135811274..135811294,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=447|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135811274..135811294,-|id=chr1:135811274..135811294,-|ontology_enrichment_celltype=CL:0000222!5.58e-07!7|ontology_enrichment_celltype_v019_2=CL:0000222,1.34e-18,7;CL:0000680,1.52e-16,6;CL:0000187,1.52e-16,6;CL:0000056,1.52e-16,6;CL:0000355,8.77e-11,9;CL:0000192,1.67e-09,3;CL:0000359,1.67e-09,3;CL:0002539,1.67e-09,3;CL:0000514,1.67e-09,3;CL:0002494,1.12e-08,3;CL:0000737,1.12e-08,3;CL:0000746,1.12e-08,3;CL:0000513,1.12e-08,3;CL:0002605,6.71e-07,2;CL:0002604,6.71e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.27e-14,5;UBERON:0007500,3.27e-14,5;UBERON:0001981,3.27e-14,5;UBERON:0002049,3.27e-14,5;UBERON:0007798,3.27e-14,5;UBERON:0004537,3.27e-14,5;UBERON:0006965,3.27e-14,5;UBERON:0000947,3.50e-12,4;UBERON:0001637,3.50e-12,4;UBERON:0004573,3.50e-12,4;UBERON:0003509,3.50e-12,4;UBERON:0004571,3.50e-12,4;UBERON:0010191,3.50e-12,4;UBERON:0004572,3.50e-12,4;UBERON:0001134,8.77e-11,9;UBERON:0002036,8.77e-11,9;UBERON:0002385,8.77e-11,9;UBERON:0000486,8.77e-11,9;UBERON:0007503,8.77e-11,9;UBERON:0001015,8.77e-11,9;UBERON:0002329,8.77e-11,9;UBERON:0003082,8.77e-11,9;UBERON:0003059,8.77e-11,9;UBERON:0007282,8.77e-11,9;UBERON:0004290,8.77e-11,9;UBERON:0009618,8.77e-11,9;UBERON:0000383,1.25e-09,10;UBERON:0001135,1.67e-09,3;UBERON:0004237,1.67e-09,3;UBERON:0004695,1.67e-09,3;UBERON:0002111,1.67e-09,3;UBERON:0004178,1.67e-09,3;UBERON:0007524,1.10e-08,11;UBERON:0003077,1.10e-08,11;UBERON:0007285,1.10e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0,0,0,0,0,0,20.1434908760924,18.1464706882931,2.56965453026354,2.34717403304412,0.65407546914134,9.66619204031676,9.3326351555656,0.979904951377538,0,0,0,0,1.80081605225163,3.43840127926508,1.54701627683233,0,0,0,0,0,0,0,0,0,3.84218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,1.15945795480671,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0.511290967734173,1.03914401841148,0.70667914902068,0,2.56652954828636,0,0,0,0,0,0.45673551887624,1.03575153458869,0.29688427812965,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,1.73036477414062,9.83275627055399,1.76922110389975,0.647067399789637,1.10420759230197,1.45462575940567,0,0.585561594023094,1.25668024088073,1.78819938646014,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0,0.995255764880744,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.486412857275134,0,0,0.536825675041487,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0,0.403367049246685,0,0,0.949058123089023,0,0,0.596869416123452,0.19496408711912,0.898819408654221,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0,0,0.370191491765402,0,0,0,0,0,0.482354319504834,0,0.575392274901621,0.810676133875177,0.274561413188081,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.538192240565737,2.41221760681684,4.61882975416512,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.195133647857799,0.315270288212382,0,0.478364305972461,1.63863314715738,1.38147985492716,1.01254341007058,0,0,0.491764273019036,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0.631016438832513,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0.283880170416537,0.534196811001766,0,1.15479086080775,3.98235415019888,0,0,0,0,0,0,1.09060118843252,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0.608929898229199,0.704015124191131,0.63549621259146,0.441056796109924,0.32977250588296,0.322928853391811,0.0603129249281559,0.238744688006273,0.164140899745061,0.582961673259701,0,0.341741761595705,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.495920734352016,0.523511883968059,0.388844919875379,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,2.89784391048286,3.37828455812128,0.549454872801795,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0.192906610981141,0.499621155875892,0.701794825336225,0.214871054048298,0.765153328275374,0.661774257358546,1.15933917810211|short_description=p@chr1:135811274..135811294,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=447 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:135811274..135811294,- | |||
|description=CAGE_peak_at_chr1:135811274..135811294,- | |||
|id=chr1:135811274..135811294,- | |||
|ontology_enrichment_celltype=CL:0000222!5.58e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.34e-18,7;CL:0000680,1.52e-16,6;CL:0000187,1.52e-16,6;CL:0000056,1.52e-16,6;CL:0000355,8.77e-11,9;CL:0000192,1.67e-09,3;CL:0000359,1.67e-09,3;CL:0002539,1.67e-09,3;CL:0000514,1.67e-09,3;CL:0002494,1.12e-08,3;CL:0000737,1.12e-08,3;CL:0000746,1.12e-08,3;CL:0000513,1.12e-08,3;CL:0002605,6.71e-07,2;CL:0002604,6.71e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.27e-14,5;UBERON:0007500,3.27e-14,5;UBERON:0001981,3.27e-14,5;UBERON:0002049,3.27e-14,5;UBERON:0007798,3.27e-14,5;UBERON:0004537,3.27e-14,5;UBERON:0006965,3.27e-14,5;UBERON:0000947,3.50e-12,4;UBERON:0001637,3.50e-12,4;UBERON:0004573,3.50e-12,4;UBERON:0003509,3.50e-12,4;UBERON:0004571,3.50e-12,4;UBERON:0010191,3.50e-12,4;UBERON:0004572,3.50e-12,4;UBERON:0001134,8.77e-11,9;UBERON:0002036,8.77e-11,9;UBERON:0002385,8.77e-11,9;UBERON:0000486,8.77e-11,9;UBERON:0007503,8.77e-11,9;UBERON:0001015,8.77e-11,9;UBERON:0002329,8.77e-11,9;UBERON:0003082,8.77e-11,9;UBERON:0003059,8.77e-11,9;UBERON:0007282,8.77e-11,9;UBERON:0004290,8.77e-11,9;UBERON:0009618,8.77e-11,9;UBERON:0000383,1.25e-09,10;UBERON:0001135,1.67e-09,3;UBERON:0004237,1.67e-09,3;UBERON:0004695,1.67e-09,3;UBERON:0002111,1.67e-09,3;UBERON:0004178,1.67e-09,3;UBERON:0007524,1.10e-08,11;UBERON:0003077,1.10e-08,11;UBERON:0007285,1.10e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0,0,0,0,0,0,20.1434908760924,18.1464706882931,2.56965453026354,2.34717403304412,0.65407546914134,9.66619204031676,9.3326351555656,0.979904951377538,0,0,0,0,1.80081605225163,3.43840127926508,1.54701627683233,0,0,0,0,0,0,0,0,0,3.84218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,1.15945795480671,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0.511290967734173,1.03914401841148,0.70667914902068,0,2.56652954828636,0,0,0,0,0,0.45673551887624,1.03575153458869,0.29688427812965,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,1.73036477414062,9.83275627055399,1.76922110389975,0.647067399789637,1.10420759230197,1.45462575940567,0,0.585561594023094,1.25668024088073,1.78819938646014,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0,0.995255764880744,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.486412857275134,0,0,0.536825675041487,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0,0.403367049246685,0,0,0.949058123089023,0,0,0.596869416123452,0.19496408711912,0.898819408654221,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0,0,0.370191491765402,0,0,0,0,0,0.482354319504834,0,0.575392274901621,0.810676133875177,0.274561413188081,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.538192240565737,2.41221760681684,4.61882975416512,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.195133647857799,0.315270288212382,0,0.478364305972461,1.63863314715738,1.38147985492716,1.01254341007058,0,0,0.491764273019036,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0.631016438832513,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0.283880170416537,0.534196811001766,0,1.15479086080775,3.98235415019888,0,0,0,0,0,0,1.09060118843252,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0.608929898229199,0.704015124191131,0.63549621259146,0.441056796109924,0.32977250588296,0.322928853391811,0.0603129249281559,0.238744688006273,0.164140899745061,0.582961673259701,0,0.341741761595705,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.495920734352016,0.523511883968059,0.388844919875379,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,2.89784391048286,3.37828455812128,0.549454872801795,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0.192906610981141,0.499621155875892,0.701794825336225,0.214871054048298,0.765153328275374,0.661774257358546,1.15933917810211 | |||
|short_description=p@chr1:135811274..135811294,- | |||
}} |
Latest revision as of 19:45, 4 August 2015
Short description: | p@chr1:135811274..135811294, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811274..135811294, - |
Coexpression cluster: | MCL_coexpression_mm9:447 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.34e-18 | 7 |
muscle precursor cell | 1.52e-16 | 6 |
muscle cell | 1.52e-16 | 6 |
myoblast | 1.52e-16 | 6 |
multi-potent skeletal muscle stem cell | 8.77e-11 | 9 |
smooth muscle cell | 1.67e-09 | 3 |
vascular associated smooth muscle cell | 1.67e-09 | 3 |
aortic smooth muscle cell | 1.67e-09 | 3 |
smooth muscle myoblast | 1.67e-09 | 3 |
cardiocyte | 1.12e-08 | 3 |
striated muscle cell | 1.12e-08 | 3 |
cardiac muscle cell | 1.12e-08 | 3 |
cardiac muscle myoblast | 1.12e-08 | 3 |
astrocyte of the cerebral cortex | 6.71e-07 | 2 |
astrocyte of the hippocampus | 6.71e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vessel | 3.27e-14 | 5 |
epithelial tube open at both ends | 3.27e-14 | 5 |
blood vessel | 3.27e-14 | 5 |
vasculature | 3.27e-14 | 5 |
vascular system | 3.27e-14 | 5 |
blood vasculature | 3.27e-14 | 5 |
vascular cord | 3.27e-14 | 5 |
aorta | 3.50e-12 | 4 |
artery | 3.50e-12 | 4 |
systemic artery | 3.50e-12 | 4 |
arterial blood vessel | 3.50e-12 | 4 |
systemic arterial system | 3.50e-12 | 4 |
aortic system | 3.50e-12 | 4 |
arterial system | 3.50e-12 | 4 |
skeletal muscle tissue | 8.77e-11 | 9 |
striated muscle tissue | 8.77e-11 | 9 |
muscle tissue | 8.77e-11 | 9 |
multilaminar epithelium | 8.77e-11 | 9 |
epithelial vesicle | 8.77e-11 | 9 |
musculature | 8.77e-11 | 9 |
somite | 8.77e-11 | 9 |
myotome | 8.77e-11 | 9 |
presomitic mesoderm | 8.77e-11 | 9 |
presumptive segmental plate | 8.77e-11 | 9 |
dermomyotome | 8.77e-11 | 9 |
trunk paraxial mesoderm | 8.77e-11 | 9 |
musculature of body | 1.25e-09 | 10 |
smooth muscle tissue | 1.67e-09 | 3 |
blood vessel smooth muscle | 1.67e-09 | 3 |
arterial system smooth muscle | 1.67e-09 | 3 |
artery smooth muscle tissue | 1.67e-09 | 3 |
aorta smooth muscle tissue | 1.67e-09 | 3 |
dense mesenchyme tissue | 1.10e-08 | 11 |
paraxial mesoderm | 1.10e-08 | 11 |
presumptive paraxial mesoderm | 1.10e-08 | 11 |