FFCP PHASE1:Hg19::chr6:160148593..160148613,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9589 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16846 | |||
|TSSclassifier=strong | |||
|UniProt=Q15007,Q5TCL9 | |||
|association_with_transcript=-6bp_to_ENST00000337387,NM_152857,uc003qsm.1,uc003qsn.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_WTAP_5end | |||
|id=chr6:160148593..160148613,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.12e-20!76;CL:0002057!2.67e-19!42;CL:0000860!1.24e-18!45;CL:0000738!2.71e-18!140;CL:0000048!8.30e-18!430;CL:0000557!9.70e-18!71;CL:0000034!1.88e-17!444;CL:0002009!6.88e-17!65;CL:0000723!1.69e-16!436;CL:0002194!7.17e-16!63;CL:0000576!7.17e-16!63;CL:0000040!7.17e-16!63;CL:0000559!7.17e-16!63;CL:0000839!1.83e-15!70;CL:0000763!1.78e-13!112;CL:0000049!1.78e-13!112;CL:0000037!5.51e-13!172;CL:0000566!5.51e-13!172;CL:0002031!1.50e-12!124;CL:0002087!4.14e-12!119;CL:0002320!4.41e-12!365;CL:0000134!6.44e-12!358;CL:0002032!1.39e-11!165;CL:0000837!1.39e-11!165;CL:0000988!6.19e-11!182;CL:0000219!2.46e-10!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.71e-17;33!CL:0002057;2.71e-17;33!CL:0000473;1.65e-15;39!CL:0000234;1.65e-15;39!CL:0000576;6.39e-11;48!CL:0000766;2.63e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.28e-21,72;CL:0000473,1.08e-20,48;CL:0000234,1.08e-20,48;CL:0000860,2.66e-19,42;CL:0002057,2.66e-19,42;CL:0000738,1.05e-18,136;CL:0000557,1.34e-18,67;CL:0000048,7.46e-18,427;CL:0002009,8.63e-18,61;CL:0000034,1.73e-17,441;CL:0002194,9.62e-17,59;CL:0000576,9.62e-17,59;CL:0000040,9.62e-17,59;CL:0000559,9.62e-17,59;CL:0000723,1.55e-16,433;CL:0000839,3.24e-16,66;CL:0000763,7.57e-14,108;CL:0000049,7.57e-14,108;CL:0000037,3.32e-13,168;CL:0002031,7.19e-13,120;CL:0002087,1.97e-12,115;CL:0002320,2.99e-12,361;CL:0000134,4.28e-12,354;CL:0002032,8.65e-12,161;CL:0000837,8.65e-12,161;CL:0000988,1.71e-11,177;CL:0000219,1.76e-10,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.19e-16!167;UBERON:0002371!2.77e-16!80;UBERON:0001474!2.41e-15!86;UBERON:0004765!7.70e-15!101;UBERON:0001434!7.70e-15!101;UBERON:0002384!6.35e-13!375;UBERON:0002405!1.33e-12!115;UBERON:0002193!7.81e-12!112;UBERON:0002390!1.27e-11!102;UBERON:0003061!1.27e-11!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.36e-17,167;UBERON:0002371,5.91e-17,76;UBERON:0004765,1.27e-16,90;UBERON:0001474,6.38e-16,82;UBERON:0001434,8.76e-16,100;UBERON:0002405,1.83e-15,93;UBERON:0002384,4.29e-13,371;UBERON:0002193,3.94e-12,108;UBERON:0002390,5.74e-12,98;UBERON:0003061,5.74e-12,98;UBERON:0000926,1.04e-07,315;UBERON:0004120,1.04e-07,315;UBERON:0006603,1.04e-07,315;UBERON:0003081,5.60e-07,203 | |||
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| |||
|short_description=p3@WTAP | |||
}} |
Revision as of 14:59, 22 January 2014
Short description: | p3@WTAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WTAP_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -6bp_to_ENST00000337387, NM_152857, uc003qsm.1, uc003qsn.2_5end |
EntrezGene: | WTAP |
HGNC: | 16846 |
UniProt: | Q15007Q5TCL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.28e-21 | 72 |
defensive cell | 1.08e-20 | 48 |
phagocyte | 1.08e-20 | 48 |
classical monocyte | 2.66e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.66e-19 | 42 |
leukocyte | 1.05e-18 | 136 |
granulocyte monocyte progenitor cell | 1.34e-18 | 67 |
multi fate stem cell | 7.46e-18 | 427 |
macrophage dendritic cell progenitor | 8.63e-18 | 61 |
stem cell | 1.73e-17 | 441 |
monopoietic cell | 9.62e-17 | 59 |
monocyte | 9.62e-17 | 59 |
monoblast | 9.62e-17 | 59 |
promonocyte | 9.62e-17 | 59 |
somatic stem cell | 1.55e-16 | 433 |
myeloid lineage restricted progenitor cell | 3.24e-16 | 66 |
myeloid cell | 7.57e-14 | 108 |
common myeloid progenitor | 7.57e-14 | 108 |
hematopoietic stem cell | 3.32e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 7.19e-13 | 120 |
nongranular leukocyte | 1.97e-12 | 115 |
connective tissue cell | 2.99e-12 | 361 |
mesenchymal cell | 4.28e-12 | 354 |
hematopoietic oligopotent progenitor cell | 8.65e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.65e-12 | 161 |
hematopoietic cell | 1.71e-11 | 177 |
motile cell | 1.76e-10 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.36e-17 | 167 |
bone marrow | 5.91e-17 | 76 |
skeletal element | 1.27e-16 | 90 |
bone element | 6.38e-16 | 82 |
skeletal system | 8.76e-16 | 100 |
immune system | 1.83e-15 | 93 |
connective tissue | 4.29e-13 | 371 |
hemolymphoid system | 3.94e-12 | 108 |
hematopoietic system | 5.74e-12 | 98 |
blood island | 5.74e-12 | 98 |
mesoderm | 1.04e-07 | 315 |
mesoderm-derived structure | 1.04e-07 | 315 |
presumptive mesoderm | 1.04e-07 | 315 |
lateral plate mesoderm | 5.60e-07 | 203 |