FFCP PHASE1:Hg19::chr6:26440710..26440788,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10384 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1140 | |||
|TSSclassifier=weak | |||
|UniProt=E9PCP5,C9JPK0,C9JUV8,C9JNZ3,C9JZT5,C9JQT8 | |||
|association_with_transcript=0bp_to_ENST00000361232,ENST00000467524,ENST00000474790,ENST00000476281,ENST00000480110,ENST00000487272,ENST00000487627,ENST00000490254,ENST00000496719,uc003nhz.2,uc003nia.2,uc011dkn.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_BTN3A3_5end | |||
|id=chr6:26440710..26440788,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.24e-22!119;CL:0000738!2.19e-21!140;CL:0002031!3.79e-17!124;CL:0000838!2.31e-15!52;CL:0000542!3.28e-15!53;CL:0000051!3.28e-15!53;CL:0000791!1.25e-11!18;CL:0000789!1.25e-11!18;CL:0002420!1.25e-11!18;CL:0002419!1.25e-11!18;CL:0000790!1.25e-11!18;CL:0000037!1.63e-10!172;CL:0000566!1.63e-10!172;CL:0000134!9.88e-10!358;CL:0002032!1.51e-09!165;CL:0000837!1.51e-09!165;CL:0002057!1.93e-09!42;CL:0000048!2.02e-09!430;CL:0000084!2.43e-09!25;CL:0000827!2.43e-09!25;CL:0002320!2.76e-09!365;CL:0000860!3.96e-09!45;CL:0000988!4.35e-09!182;CL:0000625!1.59e-08!11;CL:0000723!2.94e-08!436;CL:0002194!1.44e-07!63;CL:0000576!1.44e-07!63;CL:0000040!1.44e-07!63;CL:0000559!1.44e-07!63;CL:0000766!1.51e-07!76;CL:0000034!3.23e-07!444;CL:0002009!8.49e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.23e-11;18!CL:0000789;1.23e-11;18!CL:0002419;1.23e-11;18!CL:0000542;1.73e-09;53!CL:0000084;2.55e-09;25!CL:0000625;1.45e-08;11!CL:0002087;3.91e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.23e-23,115;CL:0000738,9.38e-22,136;CL:0002031,2.17e-17,120;CL:0000838,2.14e-15,52;CL:0000542,3.05e-15,53;CL:0000051,3.05e-15,53;CL:0000791,1.18e-11,18;CL:0000789,1.18e-11,18;CL:0002420,1.18e-11,18;CL:0002419,1.18e-11,18;CL:0000790,1.18e-11,18;CL:0000037,2.41e-10,168;CL:0000134,1.54e-09,354;CL:0000860,1.85e-09,42;CL:0002057,1.85e-09,42;CL:0002032,2.22e-09,161;CL:0000837,2.22e-09,161;CL:0000084,2.33e-09,25;CL:0000827,2.33e-09,25;CL:0000048,2.69e-09,427;CL:0002320,4.28e-09,361;CL:0000988,4.51e-09,177;CL:0000473,4.82e-09,48;CL:0000234,4.82e-09,48;CL:0000625,1.53e-08,11;CL:0000723,3.35e-08,433;CL:0002194,6.78e-08,59;CL:0000576,6.78e-08,59;CL:0000040,6.78e-08,59;CL:0000559,6.78e-08,59;CL:0000766,8.30e-08,72;CL:0000034,2.96e-07,441;CL:0002009,5.19e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000790;1.23e-11;18!CL:0000051;1.73e-09;53!CL:0002057;8.58e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.91e-11!112;UBERON:0002390!2.60e-11!102;UBERON:0003061!2.60e-11!102;UBERON:0000178!5.58e-09!15;UBERON:0000179!5.58e-09!15;UBERON:0000463!5.58e-09!15;UBERON:0002384!8.92e-09!375;UBERON:0007023!1.07e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.30e-09;15!UBERON:0000179;5.30e-09;15!UBERON:0000463;5.30e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.36e-11,108;UBERON:0002390,1.75e-11,98;UBERON:0003061,1.75e-11,98;UBERON:0000178,5.37e-09,15;UBERON:0000179,5.37e-09,15;UBERON:0000463,5.37e-09,15;UBERON:0002384,1.31e-08,371;UBERON:0007023,1.64e-07,114 | |||
|phase1_expression=11.6274162733156,9.84862409898522,14.2363948136931,6.00439790118782,8.93922188854576,12.2127393374052,5.06599756336621,10.1075179748293,8.88031135879451,1.22866968250754,0,0,0.791300934685361,9.53000917792359,1.32558950291166,4.70627602516243,8.43772339233568,6.57279081348636,4.87932798790507,3.0780264519197,1.63200552995402,1.56727360739044,4.86601178122796,0.958120975510189,0.753255837568817,10.2393963702255,8.12795835554463,9.44529375764151,23.6018566109342,34.1608164306519,13.6238188518147,1.83884244895785,1.50602959389125,1.10926203050036,9.99326887485891,3.83856927716038,10.2760153767197,17.7278530730201,11.2304890583279,11.2845652772243,27.0937723830308,26.5592806135563,21.3787721136375,14.5398238779565,9.44689859222024,9.46077838632483,11.1565937714729,5.75635043230556,4.64559556342655,13.5215424391411,6.66017836975662,8.51336027598907,8.96338769915208,5.80936215225443,9.47985406160392,9.41211697713024,6.27684145133045,7.86532195557796,11.0190201253525,7.38136762275015,9.59005688698562,23.0895910130701,9.57425556583833,16.1965405202424,11.8985787837719,3.97169657283798,8.71951148593805,13.0649305933506,9.90817544998383,12.5969529928968,10.2917915447673,6.62899744777616,14.8737322097216,30.6320165152316,31.4654363948264,24.1107442334632,22.3533975981525,24.028302854641,16.5547354297993,27.3612233991599,35.0093351870399,28.6782721410475,33.4392864476513,31.1299008419415,44.4754626931777,29.444385357089,28.8285110665929,33.33564151736,27.1028397841793,29.5756663905963,19.9224539188307,14.0936925449025,14.1441094406335,9.25199300053181,5.04457706683382,10.271979306228,30.8834339078718,22.7946242394516,22.4105633909465,37.2825884721212,45.9550395953362,69.1233796372711,68.189354942769,50.8031683396392,54.20748697537,54.7188719621544,77.7207089005595,27.7958163804715,43.9600594752388,28.6121954010396,29.2931018852999,38.2540073170269,71.4741234441131,70.898319443774,68.9934457112847,33.7661841238747,47.5193412066382,61.1656852959081,77.9300651420069,65.6244753507639,66.4105122933547,71.2839033336281,59.4771720357202,64.1212921883636,78.7063577279779,77.1893841663495,58.3000877813943,47.7807981442616,27.2788999699177,29.6890027959738,4.87613732627923,6.03630773733273,4.73091478821062,6.14446559053763,4.51204119572301,3.62116297402059,3.9764297352555,5.35298357332899,5.67208902984407,3.76939975686359,4.0404001418838,14.0802506160041,1.09288586487763,0,5.8418530857843,7.48757870386849,6.64789802594326,5.96226560763355,12.5838880371628,4.45749001595478,2.78267370313387,1.72046919021225,3.12426451446835,1.13061588384802,3.77549492588915,2.20094433552054,3.34391946458897,4.90991842421725,10.6729878806013,3.01248551488203,4.02829317109147,6.84244895146661,1.70843440283719,4.04429388380456,2.43042584364528,9.46577119811245,3.36794058939255,2.36484109014977,0,0.949265659568129,1.09921046358244,2.63560834872127,7.75560528296651,1.3082821564276,10.4364109856017,6.58478660655815,14.6974190702673,13.7681577959431,3.54668382198357,2.24271040056923,2.1349799145941,3.94668077467456,9.33633106199299,4.98429486657846,5.88462851208451,10.8977347904351,14.98057403648,0.937285727335186,6.24320153660641,3.99330275081114,5.82849854152024,2.11382097558777,1.45685649931318,2.24721290723598,6.32877930890169,3.0708579327942,4.33968280938215,16.6320400019487,11.1270118175351,1.82032272387605,2.87447256726495,4.54507507675979,3.75355559615892,4.71008996323111,4.82875382968922,4.29082914118628,7.96261712204963,4.76415169272088,8.43131287737651,7.47450860864986,5.29829752898905,10.2030972668697,8.65641245602887,9.27505944164265,7.07244054060041,6.07594796068558,3.31285817548075,7.32057945307932,10.2175387492952,24.4085545796406,12.0703261455649,5.44061330429257,2.88253006927829,2.12586938479627,4.09119180886252,3.44165514466805,0,0,0,0,0,0,32.8544017892614,18.6539872075937,5.52539685409922,18.1103491932472,12.9938306700525,3.43089720115547,3.03452442140583,3.85617647813571,2.75734931830985,2.39667388501647,1.89816495288877,2.96628877952362,2.15843611637881,3.07797725557112,5.16708818237254,2.80483547606892,4.5273141246454,2.94017422771084,1.26755034821831,3.9313088667105,7.68026878685825,2.20731549707325,4.18160691046586,8.7499583252248,3.18275827685014,0,1.3068766413512,4.53683381276795,0.977424915930974,0,2.88662684050547,3.36198174427723,5.28339124061197,7.21832238805369,8.7967247389556,10.4639783729029,0.790204397959275,0,16.2503224017682,8.65815781015179,7.8774516013026,7.49870671894216,3.35964256397719,3.26082723657489,0.626909658919938,0.581267877027924,0.766765358330422,2.95597942737566,4.0502279646084,3.7319060797339,2.30591925467138,2.65109110195398,4.88933786049702,8.02175693672383,10.5495702489042,5.13217338068116,4.31875469353959,8.40960561962969,9.71809870943966,2.91540819297938,4.3596006883328,3.0802080044799,9.30756353456,7.15312891703765,5.071816515336,12.233153362904,5.2003718455683,0.771622122786426,0,0.799266537048298,8.14974563851441,4.88359444852299,4.11620168390384,5.21177894869976,7.4632309235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| |||
|short_description=p1@BTN3A3 | |||
}} |
Revision as of 10:37, 22 January 2014
Short description: | p1@BTN3A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BTN3A3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000361232, ENST00000467524, ENST00000474790, ENST00000476281, ENST00000480110, ENST00000487272, ENST00000487627, ENST00000490254, ENST00000496719, uc003nhz.2, uc003nia.2, uc011dkn.1_5end |
EntrezGene: | BTN3A3 |
HGNC: | 1140 |
UniProt: | E9PCP5C9JPK0C9JUV8C9JNZ3C9JZT5C9JQT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.36e-11 | 108 |
hematopoietic system | 1.75e-11 | 98 |
blood island | 1.75e-11 | 98 |
blood | 5.37e-09 | 15 |
haemolymphatic fluid | 5.37e-09 | 15 |
organism substance | 5.37e-09 | 15 |
connective tissue | 1.31e-08 | 371 |
adult organism | 1.64e-07 | 114 |