FFCP PHASE1:Hg19::chr6:29803155..29803158,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C388 | |||
|description=CAGE_peak_at_chr6:29803155..29803158,+ | |||
|id=chr6:29803155..29803158,+ | |||
|ontology_enrichment_celltype=CL:1000449!1.16e-11!16;CL:1000497!2.67e-10!18;CL:0002518!2.67e-10!18;CL:1000612!1.21e-07!7;CL:1000746!1.21e-07!7;CL:1000507!2.90e-07!12;CL:1000494!2.90e-07!12;CL:0002681!7.07e-07!13;CL:0002584!7.07e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002188;1.93e-18;5!CL:1000449;8.75e-14;15!CL:1000746;1.80e-13;7!CL:1000612;1.80e-13;7!CL:1000497;3.03e-12;17!CL:0002518;3.03e-12;17!CL:0002681;2.96e-08;12!CL:0002584;2.96e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.11e-18,5;CL:1000449,8.38e-14,15;CL:1000746,1.91e-13,7;CL:1000612,1.91e-13,7;CL:1000497,2.92e-12,17;CL:0002518,2.92e-12,17;CL:0002681,3.07e-08,12;CL:0002584,3.07e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!1.16e-11!16;UBERON:0001285!1.16e-11!16;UBERON:0007684!1.16e-11!16;UBERON:0003220!1.16e-11!16;UBERON:0004208!1.16e-11!16;UBERON:0006555!6.09e-11!17;UBERON:0005103!6.09e-11!17;UBERON:0000083!6.09e-11!17;UBERON:0009201!6.09e-11!17;UBERON:0004819!6.09e-11!17;UBERON:0006553!6.09e-11!17;UBERON:0003074!6.09e-11!17;UBERON:0003060!6.09e-11!17;UBERON:0000080!2.67e-10!18;UBERON:0002120!2.67e-10!18;UBERON:0004875!2.67e-10!18;UBERON:0005721!2.67e-10!18;UBERON:0005754!2.67e-10!18;UBERON:0007297!2.67e-10!18;UBERON:0004876!3.28e-09!20;UBERON:0003887!9.64e-09!21;UBERON:0000353!7.70e-08!17;UBERON:0000074!1.21e-07!7;UBERON:0001229!1.21e-07!7;UBERON:0001230!1.21e-07!7;UBERON:0005749!1.21e-07!7;UBERON:0004199!1.21e-07!7;UBERON:0004209!1.21e-07!7;UBERON:0004198!1.21e-07!7;UBERON:0009773!2.90e-07!12;UBERON:0001231!2.90e-07!12;UBERON:0004810!2.90e-07!12;UBERON:0000058!6.05e-07!26;UBERON:0001225!7.07e-07!13;UBERON:0008987!7.07e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.75e-14;15!UBERON:0004819;8.75e-14;15!UBERON:0001285;8.75e-14;15!UBERON:0007684;8.75e-14;15!UBERON:0000074;1.80e-13;7!UBERON:0001229;1.80e-13;7!UBERON:0002113;7.32e-09;24!UBERON:0011143;7.32e-09;24!UBERON:0001225;2.96e-08;12!UBERON:0008987;2.96e-08;12!UBERON:0000489;1.95e-07;29!UBERON:0006554;3.30e-07;30!UBERON:0001008;3.30e-07;30!UBERON:0001851;8.83e-07;15!UBERON:0000353;8.83e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.38e-14,15;UBERON:0009773,8.38e-14,15;UBERON:0001231,8.38e-14,15;UBERON:0001285,8.38e-14,15;UBERON:0007684,8.38e-14,15;UBERON:0004208,8.38e-14,15;UBERON:0010532,1.91e-13,7;UBERON:0000074,1.91e-13,7;UBERON:0001229,1.91e-13,7;UBERON:0001230,1.91e-13,7;UBERON:0003220,1.91e-13,7;UBERON:0005749,1.91e-13,7;UBERON:0004199,1.91e-13,7;UBERON:0004209,1.91e-13,7;UBERON:0004198,1.91e-13,7;UBERON:0006555,5.52e-13,16;UBERON:0004819,5.52e-13,16;UBERON:0005103,6.88e-12,8;UBERON:0000083,6.88e-12,8;UBERON:0009201,6.88e-12,8;UBERON:0006553,6.88e-12,8;UBERON:0003074,6.88e-12,8;UBERON:0003060,6.88e-12,8;UBERON:0000080,1.12e-10,9;UBERON:0002120,1.12e-10,9;UBERON:0004875,1.12e-10,9;UBERON:0005721,1.12e-10,9;UBERON:0005754,1.12e-10,9;UBERON:0007297,1.12e-10,9;UBERON:0004876,6.61e-09,11;UBERON:0001225,3.07e-08,12;UBERON:0008987,3.07e-08,12;UBERON:0003887,3.07e-08,12;UBERON:0002113,3.08e-08,26;UBERON:0003918,3.08e-08,26;UBERON:0011143,3.08e-08,26;UBERON:0005095,3.08e-08,26;UBERON:0007687,3.08e-08,26;UBERON:0000489,5.30e-07,31;UBERON:0001851,9.09e-07,15;UBERON:0000353,9.09e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17966238476695,0,0,0,2.56244050835899,0.589211814949674,0.886135578334485,0.812411591295047,1.28091319725675,0.910415432919148,0.164437904603676,0.552700035571697,1.15921234294021,0.14828656316206,0,0,2.15287751125376,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,1.46139224653261,0.105551628892876,1.13733384070897,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr6:29803155..29803158,+ | |||
}} |
Revision as of 10:45, 22 January 2014
Short description: | p@chr6:29803155..29803158, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:29803155..29803158, + |
Coexpression cluster: | C388_CD4_CD8_cord_Peripheral_Natural_Whole_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.11e-18 | 5 |
epithelial cell of nephron | 8.38e-14 | 15 |
glomerular cell | 1.91e-13 | 7 |
kidney corpuscule cell | 1.91e-13 | 7 |
kidney cell | 2.92e-12 | 17 |
kidney epithelial cell | 2.92e-12 | 17 |
kidney cortical cell | 3.07e-08 | 12 |
renal cortical epithelial cell | 3.07e-08 | 12 |