FFCP PHASE1:Mm9::chr1:52065454..52065495,+: Difference between revisions
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{{FFCP|EntrezGene=20849|HGNC=|MCL_coexpression_id=36|UniProt=Q3V157,P42228|association_with_transcript=366bp_to_ENSMUST00000027277,NM_011487,uc007axw.1,uc007axx.1_5end|description=CAGE_peak_1_at_Stat4_5end|id=chr1:52065454..52065495,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,2.67e-08,32;CL:0002032,2.67e-08,32;CL:0000037,2.67e-08,32;CL:0000837,2.67e-08,32;CL:0000791,2.97e-08,9;CL:0000789,2.97e-08,9;CL:0002420,2.97e-08,9;CL:0002419,2.97e-08,9;CL:0000790,2.97e-08,9;CL:0000624,2.07e-07,8;CL:0000838,9.50e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.10e-12!48;UBERON:0002390!9.75e-12!45;UBERON:0003061!9.75e-12!45;UBERON:0004177!4.00e-11!29;UBERON:0002405!4.73e-10!70;UBERON:0001041!2.91e-09!92;UBERON:0000926!4.01e-09!193;UBERON:0004120!4.01e-09!193;UBERON:0006603!4.01e-09!193;UBERON:0003408!4.34e-09!24;UBERON:0001004!8.11e-09!42;UBERON:0002370!8.92e-09!23;UBERON:0000974!8.92e-09!23;UBERON:0004807!8.92e-09!23;UBERON:0005058!8.92e-09!23;UBERON:0003351!8.92e-09!23;UBERON:0009113!8.92e-09!23;UBERON:0003295!8.92e-09!23;UBERON:0009722!8.92e-09!23;UBERON:0005562!8.92e-09!23;UBERON:0007690!8.92e-09!23;UBERON:0000065!1.65e-08!41;UBERON:0006562!2.35e-08!24;UBERON:0001557!2.35e-08!24;UBERON:0001042!2.35e-08!24;UBERON:0008814!2.35e-08!24;UBERON:0009145!2.35e-08!24;UBERON:0000077!2.89e-08!97;UBERON:0005057!1.10e-07!51;UBERON:0003104!1.20e-07!131;UBERON:0009142!1.20e-07!131;UBERON:0003081!1.64e-07!88;UBERON:0001007!5.72e-07!128;UBERON:0001555!5.72e-07!128;UBERON:0007026!5.72e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.32e-18,48;UBERON:0002405,9.32e-18,48;UBERON:0002390,1.67e-16,45;UBERON:0003061,1.67e-16,45;UBERON:0004177,1.80e-15,29;UBERON:0005057,1.80e-15,29;UBERON:0003408,8.50e-13,24;UBERON:0002370,2.16e-12,23;UBERON:0000974,2.16e-12,23;UBERON:0004807,2.16e-12,23;UBERON:0005058,2.16e-12,23;UBERON:0003351,2.16e-12,23;UBERON:0009113,2.16e-12,23;UBERON:0003295,2.16e-12,23;UBERON:0009722,2.16e-12,23;UBERON:0005562,2.16e-12,23;UBERON:0007690,2.16e-12,23;UBERON:0000077,4.91e-12,35;UBERON:0001004,1.38e-11,42;UBERON:0006562,1.65e-11,24;UBERON:0001557,1.65e-11,24;UBERON:0001042,1.65e-11,24;UBERON:0008814,1.65e-11,24;UBERON:0009145,1.65e-11,24;UBERON:0000065,3.50e-11,41;UBERON:0001041,1.51e-10,80;UBERON:0000072,2.74e-09,27;UBERON:0003081,2.22e-08,87;UBERON:0001007,6.44e-07,116;UBERON:0001555,6.44e-07,116;UBERON:0007026,6.44e-07,116;UBERON:0005911,8.99e-07,69|phase1_expression=0,0,0,0,0,0,0,90.1280797622202,16.472280491745,17.3207749478275,13.0125655851384,11.5669630543238,86.4563686152589,81.2135538472486,1.99865857089398,7.08663435864391,2.79824751251259,32.9657962799358,32.6332351981658,26.3121584114779,1.7008658030214,0,0,1.75991665072747,1.37645568640302,0,0,0,0.380046838912748,0.756090389279792,0.886922042621219,0,0,0,0,0,0.204169356262369,53.1535171035873,23.440060335714,62.299325532882,77.6465564200939,64.8893210710523,65.5438976592057,0,0,0,0,0,0,0,0,0,20.1339127269284,47.8739013727487,55.1193830593641,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0,0.530083353332288,0,3.18850937571846,0.860423876981386,0,0,0,0,2.38755514223978,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.7127581957859,78.9760545123874,1.92974780784272,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,2.74738778147832,17.6922110389975,0.647067399789637,2.42925670306433,3.39412677194655,1.86391761218122,0,0,2.81002760729451,26.8385878893261,13.197860081855,21.2207279212018,0.449371918214468,0.915001205637253,0.251308704225729,1.39059456153821,4.34716277461562,0.20778804455956,0.324482526135515,2.13862664085664,5.22509276562391,0.758168275301024,0.420883711772948,0.520481771850815,0,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0,1.07783996466421,0.567318240503458,0.879755620819744,0,0.278047249225598,0.696504333044333,0.823128545631774,1.59227413454795,14.7464769335779,14.1541348913093,11.3665399758237,0.621377317606506,1.40715635988658,2.52086886045421,2.13070262026689,1.57411385397923,0.925602677324269,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,0.492502392237286,0.162137619091711,0,0.219550115291051,0.402619256281115,0.420579897128254,0,5.94753809370836,0.528901133327089,0.853153002140936,1.39342003116263,1.03093969057675,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,1.98956472041151,1.55971269695296,1.79763881730844,0.216138049874694,0.796565093017469,0.189667900953082,0.799739588268102,1.1270773567308,1.4255592949172,1.55161989734101,0.911765658574141,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0,2.16898637430922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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20849 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3V157,uniprot:P42228 | |||
|association_with_transcript=366bp_to_ENSMUST00000027277,NM_011487,uc007axw.1,uc007axx.1_5end | |||
|cluster_id=chr1:52065454..52065495,+ | |||
|description=CAGE_peak_1_at_Stat4_5end | |||
|id=chr1:52065454..52065495,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.67e-08,32;CL:0002032,2.67e-08,32;CL:0000037,2.67e-08,32;CL:0000837,2.67e-08,32;CL:0000791,2.97e-08,9;CL:0000789,2.97e-08,9;CL:0002420,2.97e-08,9;CL:0002419,2.97e-08,9;CL:0000790,2.97e-08,9;CL:0000624,2.07e-07,8;CL:0000838,9.50e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.10e-12!48;UBERON:0002390!9.75e-12!45;UBERON:0003061!9.75e-12!45;UBERON:0004177!4.00e-11!29;UBERON:0002405!4.73e-10!70;UBERON:0001041!2.91e-09!92;UBERON:0000926!4.01e-09!193;UBERON:0004120!4.01e-09!193;UBERON:0006603!4.01e-09!193;UBERON:0003408!4.34e-09!24;UBERON:0001004!8.11e-09!42;UBERON:0002370!8.92e-09!23;UBERON:0000974!8.92e-09!23;UBERON:0004807!8.92e-09!23;UBERON:0005058!8.92e-09!23;UBERON:0003351!8.92e-09!23;UBERON:0009113!8.92e-09!23;UBERON:0003295!8.92e-09!23;UBERON:0009722!8.92e-09!23;UBERON:0005562!8.92e-09!23;UBERON:0007690!8.92e-09!23;UBERON:0000065!1.65e-08!41;UBERON:0006562!2.35e-08!24;UBERON:0001557!2.35e-08!24;UBERON:0001042!2.35e-08!24;UBERON:0008814!2.35e-08!24;UBERON:0009145!2.35e-08!24;UBERON:0000077!2.89e-08!97;UBERON:0005057!1.10e-07!51;UBERON:0003104!1.20e-07!131;UBERON:0009142!1.20e-07!131;UBERON:0003081!1.64e-07!88;UBERON:0001007!5.72e-07!128;UBERON:0001555!5.72e-07!128;UBERON:0007026!5.72e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.32e-18,48;UBERON:0002405,9.32e-18,48;UBERON:0002390,1.67e-16,45;UBERON:0003061,1.67e-16,45;UBERON:0004177,1.80e-15,29;UBERON:0005057,1.80e-15,29;UBERON:0003408,8.50e-13,24;UBERON:0002370,2.16e-12,23;UBERON:0000974,2.16e-12,23;UBERON:0004807,2.16e-12,23;UBERON:0005058,2.16e-12,23;UBERON:0003351,2.16e-12,23;UBERON:0009113,2.16e-12,23;UBERON:0003295,2.16e-12,23;UBERON:0009722,2.16e-12,23;UBERON:0005562,2.16e-12,23;UBERON:0007690,2.16e-12,23;UBERON:0000077,4.91e-12,35;UBERON:0001004,1.38e-11,42;UBERON:0006562,1.65e-11,24;UBERON:0001557,1.65e-11,24;UBERON:0001042,1.65e-11,24;UBERON:0008814,1.65e-11,24;UBERON:0009145,1.65e-11,24;UBERON:0000065,3.50e-11,41;UBERON:0001041,1.51e-10,80;UBERON:0000072,2.74e-09,27;UBERON:0003081,2.22e-08,87;UBERON:0001007,6.44e-07,116;UBERON:0001555,6.44e-07,116;UBERON:0007026,6.44e-07,116;UBERON:0005911,8.99e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,90.1280797622202,16.472280491745,17.3207749478275,13.0125655851384,11.5669630543238,86.4563686152589,81.2135538472486,1.99865857089398,7.08663435864391,2.79824751251259,32.9657962799358,32.6332351981658,26.3121584114779,1.7008658030214,0,0,1.75991665072747,1.37645568640302,0,0,0,0.380046838912748,0.756090389279792,0.886922042621219,0,0,0,0,0,0.204169356262369,53.1535171035873,23.440060335714,62.299325532882,77.6465564200939,64.8893210710523,65.5438976592057,0,0,0,0,0,0,0,0,0,20.1339127269284,47.8739013727487,55.1193830593641,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0,0.530083353332288,0,3.18850937571846,0.860423876981386,0,0,0,0,2.38755514223978,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.7127581957859,78.9760545123874,1.92974780784272,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,2.74738778147832,17.6922110389975,0.647067399789637,2.42925670306433,3.39412677194655,1.86391761218122,0,0,2.81002760729451,26.8385878893261,13.197860081855,21.2207279212018,0.449371918214468,0.915001205637253,0.251308704225729,1.39059456153821,4.34716277461562,0.20778804455956,0.324482526135515,2.13862664085664,5.22509276562391,0.758168275301024,0.420883711772948,0.520481771850815,0,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0,1.07783996466421,0.567318240503458,0.879755620819744,0,0.278047249225598,0.696504333044333,0.823128545631774,1.59227413454795,14.7464769335779,14.1541348913093,11.3665399758237,0.621377317606506,1.40715635988658,2.52086886045421,2.13070262026689,1.57411385397923,0.925602677324269,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,0.492502392237286,0.162137619091711,0,0.219550115291051,0.402619256281115,0.420579897128254,0,5.94753809370836,0.528901133327089,0.853153002140936,1.39342003116263,1.03093969057675,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,1.98956472041151,1.55971269695296,1.79763881730844,0.216138049874694,0.796565093017469,0.189667900953082,0.799739588268102,1.1270773567308,1.4255592949172,1.55161989734101,0.911765658574141,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0,2.16898637430922,1.17935397067922,0.899448449539415,0.608580364165509,1.92941727801933,1.78238096246994,0.863088412352432,1.78348749452539,0.549122826376163,2.87536413054709,1.48856379067401,1.5601883655728,1.01031551178845,0.179397413521912,0,7.39012760666419,1.32643988239339,2.77040459951444,1.69745085775188,1.17345124144251,0.670025029767263,0.714130922658041,0.390267295715598,1.7339865851681,2.21464689648775,2.07291199254733,2.45794972073607,3.9717545829156,2.74833211304872,0,0,0.983528546038072,1.65562047782839,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,2.84904965867608,2.44330439030364,1.15479086080775,2.65490276679926,1.94224508923985,0.906970670894253,0.565815239267694,0.295301892880773,1.22974059177571,0,1.45413491791002,1.06949213515416,2.52829406348653,2.10837217149998,1.03135543248187,1.70219802876894,0.900305470156551,1.03486947026204,1.07168517515796,1.24138163549592,0.713475270408282,0.987294123612726,0.304464949114599,0.469343416127421,0,0.441056796109924,0.16488625294148,0.322928853391811,0.542816324353403,0.119372344003136,0.328281799490123,1.7488850197791,0,12.1318325366475,1.857481811669,4.07427960213366,4.33247451110789,6.01454601972511,7.54967971581525,35.8654487287035,36.3873776041511,36.4847930843679,0,1.10717597753397,1.42323626988794,1.51207477150522,1.04544148007234,0.655087691238533,0.944050424693745,0.578574190077352,0,1.68499465279331,2.4853572523477,2.25477175473676,0.149516546043979,0,0.583353565032143,0.129159823477731,0.675824501963113,0.704143431874524,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,32.5491454247024,8.5144590421869,22.9045434477565,19.2282818007137,18.2607229580831,26.0272574763457,21.3947900145545,22.7441871848849,24.2319479875554,24.9958325828399,24.6015891733891,25.0466753501164,31.6536958996684,38.1018701111915,0.453460767230423,0,0,0,0.19318959403219,1.50145980360946,1.28206136987086,0.643105137237198,1.50471631210609,0.564751842617067,0.920650473014354,1.14579102687879,1.54667864109319,2.05524755931193,3.0215755895588,2.02506750069542,4.05289082901798,2.71885445390523,1.55328093525546,0.415149390336707,1.59609949360412,0.682934423016537,0.729320151204882,1.67690530102386,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.0936415074698824,0.576226371643824,0.689225627467359,0.476293691283074,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415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| |||
|short_description=p1@Stat4 | |||
}} |
Revision as of 17:39, 5 August 2015
Short description: | p1@Stat4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stat4_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 366bp_to_ENSMUST00000027277, NM_011487, uc007axw.1, uc007axx.1_5end |
EntrezGene: | 20849 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.67e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.67e-08 | 32 |
hematopoietic stem cell | 2.67e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.67e-08 | 32 |
mature alpha-beta T cell | 2.97e-08 | 9 |
alpha-beta T cell | 2.97e-08 | 9 |
immature T cell | 2.97e-08 | 9 |
mature T cell | 2.97e-08 | 9 |
immature alpha-beta T cell | 2.97e-08 | 9 |
CD4-positive, alpha-beta T cell | 2.07e-07 | 8 |
lymphoid lineage restricted progenitor cell | 9.50e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.32e-18 | 48 |
immune system | 9.32e-18 | 48 |
hematopoietic system | 1.67e-16 | 45 |
blood island | 1.67e-16 | 45 |
hemopoietic organ | 1.80e-15 | 29 |
immune organ | 1.80e-15 | 29 |
gland of gut | 8.50e-13 | 24 |
thymus | 2.16e-12 | 23 |
neck | 2.16e-12 | 23 |
respiratory system epithelium | 2.16e-12 | 23 |
hemolymphoid system gland | 2.16e-12 | 23 |
pharyngeal epithelium | 2.16e-12 | 23 |
thymic region | 2.16e-12 | 23 |
pharyngeal gland | 2.16e-12 | 23 |
entire pharyngeal arch endoderm | 2.16e-12 | 23 |
thymus primordium | 2.16e-12 | 23 |
early pharyngeal endoderm | 2.16e-12 | 23 |
mixed endoderm/mesoderm-derived structure | 4.91e-12 | 35 |
respiratory system | 1.38e-11 | 42 |
pharynx | 1.65e-11 | 24 |
upper respiratory tract | 1.65e-11 | 24 |
chordate pharynx | 1.65e-11 | 24 |
pharyngeal arch system | 1.65e-11 | 24 |
pharyngeal region of foregut | 1.65e-11 | 24 |
respiratory tract | 3.50e-11 | 41 |
foregut | 1.51e-10 | 80 |
segment of respiratory tract | 2.74e-09 | 27 |
lateral plate mesoderm | 2.22e-08 | 87 |
digestive system | 6.44e-07 | 116 |
digestive tract | 6.44e-07 | 116 |
primitive gut | 6.44e-07 | 116 |
endo-epithelium | 8.99e-07 | 69 |