FFCP PHASE1:Hg19::chr6:44095347..44095409,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17735 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T3F8 | |||
|association_with_transcript=0bp_to_ENST00000323267,ENST00000534326,NM_018426,uc003owq.1,uc003owr.2_5end | |||
|description=CAGE_peak_2_at_TMEM63B_5end | |||
|id=chr6:44095347..44095409,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.77e-16!254;CL:0002076!1.37e-12!43;CL:0002321!7.74e-12!248;CL:0000220!2.47e-11!246;CL:0000223!6.01e-11!59;CL:0000221!4.29e-10!71;CL:0002368!5.24e-08!13;CL:0002077!1.12e-07!33;CL:0002159!6.51e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.31e-10;42!CL:0002368;4.97e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.04e-16,253;CL:0002076,5.95e-13,42;CL:0002321,2.08e-11,250;CL:0000223,3.45e-11,58;CL:0000221,6.40e-10,72;CL:0002368,5.21e-08,13;CL:0002077,2.03e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.67e-17!365;UBERON:0000468!9.41e-16!659;UBERON:0000924!9.40e-15!173;UBERON:0006601!9.40e-15!173;UBERON:0004121!9.48e-14!169;UBERON:0000481!1.13e-12!347;UBERON:0000483!3.62e-12!309;UBERON:0000119!6.74e-12!312;UBERON:0004111!1.05e-11!241;UBERON:0000467!4.50e-11!625;UBERON:0000480!9.31e-11!626;UBERON:0000922!1.93e-10!612;UBERON:0000033!3.22e-10!123;UBERON:0000477!6.21e-10!286;UBERON:0000064!6.77e-10!219;UBERON:0000153!2.43e-09!129;UBERON:0007811!2.43e-09!129;UBERON:0009569!2.82e-09!113;UBERON:0002050!4.66e-09!605;UBERON:0005423!4.66e-09!605;UBERON:0000923!5.62e-09!604;UBERON:0005291!5.62e-09!604;UBERON:0006598!5.62e-09!604;UBERON:0002532!5.62e-09!604;UBERON:0000025!6.13e-09!194;UBERON:0000073!6.58e-08!94;UBERON:0001016!6.58e-08!94;UBERON:0005743!1.02e-07!86;UBERON:0004119!1.09e-07!169;UBERON:0000925!1.09e-07!169;UBERON:0006595!1.09e-07!169;UBERON:0000062!1.14e-07!511;UBERON:0001017!3.14e-07!82;UBERON:0002346!4.78e-07!90;UBERON:0000466!8.34e-07!126 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.05e-14,171;UBERON:0000924,3.05e-14,171;UBERON:0006601,3.05e-14,171;UBERON:0011216,1.11e-12,223;UBERON:0000483,2.29e-12,306;UBERON:0000119,4.31e-12,309;UBERON:0004111,1.48e-11,240;UBERON:0010371,7.66e-11,104;UBERON:0000922,9.76e-10,592;UBERON:0009569,2.15e-09,112;UBERON:0005423,2.43e-09,581;UBERON:0004119,3.56e-09,160;UBERON:0000925,3.56e-09,160;UBERON:0006595,3.56e-09,160;UBERON:0000025,6.88e-09,192;UBERON:0001007,1.22e-07,145;UBERON:0001555,1.22e-07,145;UBERON:0007026,1.22e-07,145;UBERON:0002346,1.67e-07,86;UBERON:0001016,3.58e-07,89;UBERON:0001017,5.63e-07,81 | |||
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| |||
|short_description=p2@TMEM63B | |||
}} |
Revision as of 12:04, 22 January 2014
Short description: | p2@TMEM63B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM63B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000323267, ENST00000534326, NM_018426, uc003owq.1, uc003owr.2_5end |
EntrezGene: | TMEM63B |
HGNC: | 17735 |
UniProt: | Q5T3F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.04e-16 | 253 |
endo-epithelial cell | 5.95e-13 | 42 |
embryonic cell | 2.08e-11 | 250 |
endodermal cell | 3.45e-11 | 58 |
ectodermal cell | 6.40e-10 | 72 |
respiratory epithelial cell | 5.21e-08 | 13 |
ecto-epithelial cell | 2.03e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.05e-14 | 171 |
ectoderm | 3.05e-14 | 171 |
presumptive ectoderm | 3.05e-14 | 171 |
organ system subdivision | 1.11e-12 | 223 |
epithelium | 2.29e-12 | 306 |
cell layer | 4.31e-12 | 309 |
anatomical conduit | 1.48e-11 | 240 |
ecto-epithelium | 7.66e-11 | 104 |
embryo | 9.76e-10 | 592 |
subdivision of trunk | 2.15e-09 | 112 |
developing anatomical structure | 2.43e-09 | 581 |
endoderm-derived structure | 3.56e-09 | 160 |
endoderm | 3.56e-09 | 160 |
presumptive endoderm | 3.56e-09 | 160 |
tube | 6.88e-09 | 192 |
digestive system | 1.22e-07 | 145 |
digestive tract | 1.22e-07 | 145 |
primitive gut | 1.22e-07 | 145 |
neurectoderm | 1.67e-07 | 86 |
nervous system | 3.58e-07 | 89 |
central nervous system | 5.63e-07 | 81 |