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FFCP PHASE1:Mm9::chr2:79095594..79095605,+: Difference between revisions

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{{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=599|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25|association_with_transcript=11bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end|description=CAGE_peak_8_at_Itga4_5end|id=chr2:79095594..79095605,+|ontology_enrichment_celltype=CL:0000988!1.16e-07!32;CL:0002032!1.16e-07!32;CL:0000037!1.16e-07!32;CL:0000566!1.16e-07!32;CL:0000837!1.16e-07!32;CL:0002031!1.41e-07!25|ontology_enrichment_celltype_v019_2=CL:0002031,7.01e-13,25;CL:0000988,2.53e-10,32;CL:0002032,2.53e-10,32;CL:0000037,2.53e-10,32;CL:0000837,2.53e-10,32;CL:0000553,4.56e-10,6;CL:0000556,4.56e-10,6;CL:0000050,3.44e-08,9;CL:0000838,2.33e-07,12;CL:0000839,7.36e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.80e-10!45;UBERON:0003061!9.80e-10!45;UBERON:0002193!1.32e-09!48;UBERON:0004177!1.94e-09!29;UBERON:0002405!3.96e-09!70;UBERON:0005057!4.40e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.44e-18,45;UBERON:0003061,6.44e-18,45;UBERON:0002193,7.74e-18,48;UBERON:0002405,7.74e-18,48;UBERON:0004177,1.00e-13,29;UBERON:0005057,1.00e-13,29;UBERON:0000077,1.68e-10,35;UBERON:0001041,1.33e-09,80;UBERON:0003081,8.97e-09,87;UBERON:0003929,9.64e-09,55;UBERON:0002370,1.33e-08,23;UBERON:0000974,1.33e-08,23;UBERON:0004807,1.33e-08,23;UBERON:0005058,1.33e-08,23;UBERON:0003351,1.33e-08,23;UBERON:0009113,1.33e-08,23;UBERON:0003295,1.33e-08,23;UBERON:0009722,1.33e-08,23;UBERON:0005562,1.33e-08,23;UBERON:0007690,1.33e-08,23;UBERON:0006562,4.16e-08,24;UBERON:0003408,4.16e-08,24;UBERON:0001557,4.16e-08,24;UBERON:0001042,4.16e-08,24;UBERON:0008814,4.16e-08,24;UBERON:0009145,4.16e-08,24;UBERON:0002368,1.58e-07,60;UBERON:0002106,2.66e-07,6;UBERON:0004457,2.66e-07,6;UBERON:0000042,2.66e-07,6;UBERON:0004854,2.66e-07,6;UBERON:0009034,2.66e-07,6;UBERON:0002095,2.66e-07,6;UBERON:0004782,2.66e-07,6;UBERON:0003281,2.66e-07,6;UBERON:0009664,2.66e-07,6;UBERON:0002296,2.66e-07,6;UBERON:0005602,2.66e-07,6;UBERON:0001179,2.66e-07,6;UBERON:0006293,2.66e-07,6;UBERON:0005911,3.38e-07,69;UBERON:0000072,7.43e-07,27|phase1_expression=0,0,0,0,0,0,0,7.48915275961142,0.422366166455,0.936258105287974,0.171217968225505,0,4.28001824828014,4.72070173062586,6.32908547449759,6.07425802169478,6.29605690315332,4.57420139769445,2.74228867211478,2.97072756258621,0,1.48936426801328,2.35079810225042,0.159992422793407,0,0,0,0,0.190023419456374,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,2.07150306917737,0.29688427812965,0.173485326766136,0,0,0,0,0,0.247194967734374,0.433798070759735,2.65383165584962,0.647067399789637,1.76673214768315,3.39412677194655,0,0,0,0,0.838705871541442,0,0.762421362438388,0,0,0,0.347648640384553,0,0,0,0.509196819251581,1.24406970610093,0,0,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.398068533636986,1.40442637462647,0.257347907114715,0,0.828503090142008,0.703578179943289,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0.426576501070468,0.464473343720877,0.644337306610467,0,0,0,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0,9.00963570866908,8.25547779475453,8.7696223830093,8.11440485554012,7.95884627182976,3.56476192493988,4.31544206176216,2.59416362840057,2.19649130550465,0,0,0,0.252578877947112,0,0,1.66277871149944,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.491589944147214,0.518054945597687,1.15719246865209,3.01582567878545,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0,0,0,1.67278158566786,0.668396022247182,0,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0.807322133479528,0.180938774784468,0.238744688006273,0.328281799490123,0.291480836629851,0,3.58828849675491,0.619160603889667,2.22233432843654,10.1718966782533,7.79157098009843,6.63456702298916,0.679913719975421,1.39951452323658,0.967399816630967,0,0.316335993581135,0,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.897099276263873,0,0.194451188344048,0.258319646955462,1.18269287843545,0.938857909166032,0.13020438484395,0.209718688851422,0,0,0.316011120628178,1.41907650703115,3.08132871494482,2.20865399062252,1.79026695667481,1.19208812868759,1.56254084375959,1.03382669022204,1.00966449948148,1.600342939755,1.00826185136841,1.16949456887703,0.865906574762965,1.75315353272353,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,0.31136204275253,3.19219898720825,1.02440163452481,1.70174701947806,1.25767897576789,0.183843508450014,1.33348036680969,0.206035057238894,1.60459604795908,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.512201219238954,0.689225627467359,0,0.927074607558844,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,1.06485483695602,0.476872379894642,0.581385666529314,0.564656282491984,0.25384382367503,0.73171189149109,1.57841826862706,0.271608227691724,0,0.593175090620871,0.788035859004508,1.22769312950907,0.77468420592983,0.771626443924566,0,0.233931608445408,0.859484216193193,0,0.220591419119515,0.927471342481686|short_description=p8@Itga4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16401
|HGNC=
|MCL_coexpression_id=599
|TSSclassifier=NA
|UniProt=uniprot:E9QK91,uniprot:Q00651,uniprot:Q792F9,uniprot:Q8BQ25
|association_with_transcript=11bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end
|cluster_id=chr2:79095594..79095605,+
|description=CAGE_peak_8_at_Itga4_5end
|id=chr2:79095594..79095605,+
|ontology_enrichment_celltype=CL:0000988!1.16e-07!32;CL:0002032!1.16e-07!32;CL:0000037!1.16e-07!32;CL:0000566!1.16e-07!32;CL:0000837!1.16e-07!32;CL:0002031!1.41e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002031,7.01e-13,25;CL:0000988,2.53e-10,32;CL:0002032,2.53e-10,32;CL:0000037,2.53e-10,32;CL:0000837,2.53e-10,32;CL:0000553,4.56e-10,6;CL:0000556,4.56e-10,6;CL:0000050,3.44e-08,9;CL:0000838,2.33e-07,12;CL:0000839,7.36e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!9.80e-10!45;UBERON:0003061!9.80e-10!45;UBERON:0002193!1.32e-09!48;UBERON:0004177!1.94e-09!29;UBERON:0002405!3.96e-09!70;UBERON:0005057!4.40e-08!51
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.44e-18,45;UBERON:0003061,6.44e-18,45;UBERON:0002193,7.74e-18,48;UBERON:0002405,7.74e-18,48;UBERON:0004177,1.00e-13,29;UBERON:0005057,1.00e-13,29;UBERON:0000077,1.68e-10,35;UBERON:0001041,1.33e-09,80;UBERON:0003081,8.97e-09,87;UBERON:0003929,9.64e-09,55;UBERON:0002370,1.33e-08,23;UBERON:0000974,1.33e-08,23;UBERON:0004807,1.33e-08,23;UBERON:0005058,1.33e-08,23;UBERON:0003351,1.33e-08,23;UBERON:0009113,1.33e-08,23;UBERON:0003295,1.33e-08,23;UBERON:0009722,1.33e-08,23;UBERON:0005562,1.33e-08,23;UBERON:0007690,1.33e-08,23;UBERON:0006562,4.16e-08,24;UBERON:0003408,4.16e-08,24;UBERON:0001557,4.16e-08,24;UBERON:0001042,4.16e-08,24;UBERON:0008814,4.16e-08,24;UBERON:0009145,4.16e-08,24;UBERON:0002368,1.58e-07,60;UBERON:0002106,2.66e-07,6;UBERON:0004457,2.66e-07,6;UBERON:0000042,2.66e-07,6;UBERON:0004854,2.66e-07,6;UBERON:0009034,2.66e-07,6;UBERON:0002095,2.66e-07,6;UBERON:0004782,2.66e-07,6;UBERON:0003281,2.66e-07,6;UBERON:0009664,2.66e-07,6;UBERON:0002296,2.66e-07,6;UBERON:0005602,2.66e-07,6;UBERON:0001179,2.66e-07,6;UBERON:0006293,2.66e-07,6;UBERON:0005911,3.38e-07,69;UBERON:0000072,7.43e-07,27
|phase1_expression=0,0,0,0,0,0,0,7.48915275961142,0.422366166455,0.936258105287974,0.171217968225505,0,4.28001824828014,4.72070173062586,6.32908547449759,6.07425802169478,6.29605690315332,4.57420139769445,2.74228867211478,2.97072756258621,0,1.48936426801328,2.35079810225042,0.159992422793407,0,0,0,0,0.190023419456374,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,2.07150306917737,0.29688427812965,0.173485326766136,0,0,0,0,0,0.247194967734374,0.433798070759735,2.65383165584962,0.647067399789637,1.76673214768315,3.39412677194655,0,0,0,0,0.838705871541442,0,0.762421362438388,0,0,0,0.347648640384553,0,0,0,0.509196819251581,1.24406970610093,0,0,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.398068533636986,1.40442637462647,0.257347907114715,0,0.828503090142008,0.703578179943289,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0.426576501070468,0.464473343720877,0.644337306610467,0,0,0,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0,9.00963570866908,8.25547779475453,8.7696223830093,8.11440485554012,7.95884627182976,3.56476192493988,4.31544206176216,2.59416362840057,2.19649130550465,0,0,0,0.252578877947112,0,0,1.66277871149944,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.491589944147214,0.518054945597687,1.15719246865209,3.01582567878545,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0,0,0,1.67278158566786,0.668396022247182,0,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0.807322133479528,0.180938774784468,0.238744688006273,0.328281799490123,0.291480836629851,0,3.58828849675491,0.619160603889667,2.22233432843654,10.1718966782533,7.79157098009843,6.63456702298916,0.679913719975421,1.39951452323658,0.967399816630967,0,0.316335993581135,0,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.897099276263873,0,0.194451188344048,0.258319646955462,1.18269287843545,0.938857909166032,0.13020438484395,0.209718688851422,0,0,0.316011120628178,1.41907650703115,3.08132871494482,2.20865399062252,1.79026695667481,1.19208812868759,1.56254084375959,1.03382669022204,1.00966449948148,1.600342939755,1.00826185136841,1.16949456887703,0.865906574762965,1.75315353272353,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,0.31136204275253,3.19219898720825,1.02440163452481,1.70174701947806,1.25767897576789,0.183843508450014,1.33348036680969,0.206035057238894,1.60459604795908,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.512201219238954,0.689225627467359,0,0.927074607558844,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,1.06485483695602,0.476872379894642,0.581385666529314,0.564656282491984,0.25384382367503,0.73171189149109,1.57841826862706,0.271608227691724,0,0.593175090620871,0.788035859004508,1.22769312950907,0.77468420592983,0.771626443924566,0,0.233931608445408,0.859484216193193,0,0.220591419119515,0.927471342481686
|short_description=p8@Itga4
}}

Revision as of 13:02, 5 August 2015

Short description:p8@Itga4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Itga4_5end
Coexpression cluster:MCL_coexpression_mm9:599
Association with transcript: 11bp_to_ENSMUST00000028395, ENSMUST00000155105, NM_010576, uc008kgo.1, uc008kgp.1, uc008kgq.1, uc008kgr.1_5end
EntrezGene:16401
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p8@Itga4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F89.01
liver, embryo E13.CNhs10524.378-3H68.26
liver, embryo E14.CNhs10594.409-16E18.77
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D110.17
spleen, neonate N20.CNhs11112.824-19H17.79
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system6.44e-1845
blood island6.44e-1845
hemolymphoid system7.74e-1848
immune system7.74e-1848
hemopoietic organ1.00e-1329
immune organ1.00e-1329
mixed endoderm/mesoderm-derived structure1.68e-1035
foregut1.33e-0980
lateral plate mesoderm8.97e-0987
gut epithelium9.64e-0955
thymus1.33e-0823
neck1.33e-0823
respiratory system epithelium1.33e-0823
hemolymphoid system gland1.33e-0823
pharyngeal epithelium1.33e-0823
thymic region1.33e-0823
pharyngeal gland1.33e-0823
entire pharyngeal arch endoderm1.33e-0823
thymus primordium1.33e-0823
early pharyngeal endoderm1.33e-0823
pharynx4.16e-0824
gland of gut4.16e-0824
upper respiratory tract4.16e-0824
chordate pharynx4.16e-0824
pharyngeal arch system4.16e-0824
pharyngeal region of foregut4.16e-0824
endocrine gland1.58e-0760
spleen2.66e-076
cavity lining2.66e-076
serous membrane2.66e-076
gastrointestinal system mesentery2.66e-076
stomach region2.66e-076
mesentery2.66e-076
gastrointestinal system serosa2.66e-076
mesentery of stomach2.66e-076
gut mesentery2.66e-076
dorsal mesentery2.66e-076
dorsal mesogastrium2.66e-076
peritoneal cavity2.66e-076
spleen primordium2.66e-076
endo-epithelium3.38e-0769
segment of respiratory tract7.43e-0727
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