FFCP PHASE1:Hg19::chr8:144679575..144679593,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3211 | |||
|TSSclassifier=strong | |||
|UniProt=F8W934,P29692,Q4VBZ6,E9PLS6,E9PLT8,E9PBQ9,E9PLL8,E9PNC8,E9PKH7,E9PLA1,E9PNW6,E9PN71,E9PL21,E9PM66 | |||
|association_with_transcript=0bp_to_ENST00000356793,ENST00000442189,ENST00000524624,ENST00000524900,ENST00000525261,ENST00000526838,ENST00000528303,ENST00000529832,ENST00000530306,ENST00000530545,ENST00000531770,ENST00000531931,ENST00000532596,ENST00000534475,ENST00000534804_5end | |||
|coexpression_cluster_id=C884 | |||
|description=CAGE_peak_1_at_EEF1D_5end | |||
|id=chr8:144679575..144679593,- | |||
|ontology_enrichment_celltype=CL:0002371!9.84e-13!591;CL:0000144!9.88e-13!625;CL:0000012!3.90e-11!682;CL:0000003!7.58e-11!722;CL:0000548!1.32e-10!679;CL:0000004!1.32e-10!679;CL:0000255!1.32e-10!679;CL:0000183!2.12e-10!59;CL:0000838!8.22e-09!52;CL:0000791!1.61e-08!18;CL:0000789!1.61e-08!18;CL:0002420!1.61e-08!18;CL:0002419!1.61e-08!18;CL:0000790!1.61e-08!18;CL:0000542!2.13e-08!53;CL:0000051!2.13e-08!53;CL:0000187!2.46e-08!54;CL:0000192!2.94e-08!42;CL:0000514!2.94e-08!42;CL:0000222!5.74e-08!119;CL:0000680!1.79e-07!57;CL:0000056!1.79e-07!57;CL:0000355!1.79e-07!57;CL:0000359!6.31e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.60e-08;18!CL:0000789;1.60e-08;18!CL:0002419;1.60e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.22e-09,52;CL:0000791,1.61e-08,18;CL:0000789,1.61e-08,18;CL:0002420,1.61e-08,18;CL:0002419,1.61e-08,18;CL:0000790,1.61e-08,18;CL:0000542,2.13e-08,53;CL:0000051,2.13e-08,53;CL:0000187,4.16e-08,55;CL:0000222,4.68e-08,121;CL:0000192,5.51e-08,43;CL:0000514,5.51e-08,43;CL:0000680,2.83e-07,58;CL:0000056,2.83e-07,58;CL:0000355,2.83e-07,58;CL:0000359,6.31e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000790;1.60e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.80e-11!118;UBERON:0004535!9.38e-10!110;UBERON:0001009!1.02e-09!113;UBERON:0004872!3.71e-09!84;UBERON:0000486!4.11e-09!82;UBERON:0004290!1.12e-08!70;UBERON:0005256!1.91e-08!143;UBERON:0003104!3.77e-08!238;UBERON:0009142!3.77e-08!238;UBERON:0000490!9.35e-08!138;UBERON:0000926!9.64e-08!448;UBERON:0004120!9.64e-08!448;UBERON:0006603!9.64e-08!448;UBERON:0001134!9.82e-08!61;UBERON:0002036!9.82e-08!61;UBERON:0003082!9.82e-08!61;UBERON:0002385!1.35e-07!63;UBERON:0001015!1.35e-07!63;UBERON:0000383!1.35e-07!63;UBERON:0001637!1.43e-07!42;UBERON:0003509!1.43e-07!42;UBERON:0004572!1.43e-07!42;UBERON:0001981!3.56e-07!60;UBERON:0007500!3.56e-07!60;UBERON:0004537!3.56e-07!60;UBERON:0006965!3.56e-07!60;UBERON:0003081!3.82e-07!216;UBERON:0000914!5.20e-07!83;UBERON:0002329!5.20e-07!83;UBERON:0003077!5.20e-07!83;UBERON:0003059!5.20e-07!83;UBERON:0007282!5.20e-07!83;UBERON:0009618!5.20e-07!83;UBERON:0007285!5.20e-07!83;UBERON:0002049!5.30e-07!79;UBERON:0007798!5.30e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.60e-11,117;UBERON:0007503,1.85e-10,78;UBERON:0004535,3.91e-10,109;UBERON:0001009,4.33e-10,112;UBERON:0004872,1.39e-09,83;UBERON:0000486,6.22e-09,83;UBERON:0000490,1.44e-08,148;UBERON:0002329,1.75e-08,71;UBERON:0003059,1.75e-08,71;UBERON:0007282,1.75e-08,71;UBERON:0004290,1.75e-08,71;UBERON:0009618,1.75e-08,71;UBERON:0003077,5.86e-08,72;UBERON:0007285,5.86e-08,72;UBERON:0007524,6.92e-08,73;UBERON:0005256,1.19e-07,122;UBERON:0007500,1.30e-07,59;UBERON:0001981,1.30e-07,59;UBERON:0004537,1.30e-07,59;UBERON:0006965,1.30e-07,59;UBERON:0001637,1.43e-07,42;UBERON:0003509,1.43e-07,42;UBERON:0004572,1.43e-07,42;UBERON:0001134,1.54e-07,62;UBERON:0002036,1.54e-07,62;UBERON:0003082,1.54e-07,62;UBERON:0002385,2.07e-07,64;UBERON:0001015,2.07e-07,64;UBERON:0000383,2.07e-07,64;UBERON:0002049,2.28e-07,78;UBERON:0007798,2.28e-07,78;UBERON:0003104,2.67e-07,160;UBERON:0009142,2.67e-07,160;UBERON:0000055,6.27e-07,68 | |||
|phase1_expression=105.191781597652,105.765658802146,96.4128124016443,128.093821892007,165.375604938096,178.829397440576,354.619829435635,197.096600509171,339.01894540339,232.95577180343,940.635974426832,264.314060277508,288.033540225471,191.095248970312,187.570914662,172.115237491654,181.411052935217,204.486825308464,159.554025204496,235.038099868588,345.781171659009,322.231453679474,156.571084960688,152.478109531193,144.248492894428,114.925762244919,111.656801651926,105.944711648212,149.478425202584,112.845843040581,158.067261905714,304.328425302525,310.844508179154,328.341561028107,179.7239053463,101.508831996019,163.241844270175,147.362778669479,154.218680104539,170.136522641228,105.240272892764,80.3256291727069,84.227210616379,138.564521556925,111.851279331888,84.9044214157357,153.868022431563,103.203139893478,121.095191019985,171.752358216324,154.977227450106,127.463921909947,163.064706988421,138.779206970523,176.054432572644,147.770236540945,119.532893725336,105.844761173635,149.981107261742,111.683301422481,120.19537965022,132.270371374873,142.815978857088,95.9005688698562,161.93675515475,120.285667634522,105.879782329248,151.754193815073,119.419588318226,126.403907618378,141.058084113575,125.950951507747,142.408074348398,139.005978393258,191.131265668574,162.904767560008,175.794307744265,178.109794910026,61.5578997049817,254.801392904676,217.217011501406,159.283142082761,248.154704690465,211.901781169707,216.150748688844,287.616170009826,247.444719988256,224.728204022203,252.519141403817,244.237761161053,259.561113913908,347.057178918225,312.317227378312,189.004999868007,165.350026079553,160.664291712797,298.015301722457,309.299470283593,305.72942901227,139.433537155826,437.387681822278,615.482147455153,436.411871633721,117.092390186317,258.958592670382,330.085502929596,175.210099855965,107.852891209018,94.032908285792,118.888605028458,124.633858021418,107.516944807704,372.79241978942,365.995852826728,315.69728189103,104.131285939063,374.789642742679,431.596071526183,173.06546934134,215.668785497413,273.455050619696,270.878832667787,223.001751354181,196.843407955495,206.135698811371,232.041707003137,241.411631094788,277.814092163681,264.230913434105,287.621266111239,29.2568239576754,242.123010353013,201.511397465404,130.479534010828,236.63149382014,235.954979387182,128.836323422278,170.322204605923,143.220248003563,145.232755337979,147.913779107224,95.0908088113394,405.096360581307,280.683823187813,49.9802986228212,53.6319590881743,60.8947459176402,162.412115151938,148.718676802833,128.895752961359,204.128992365606,190.97208011356,185.720168360063,143.588217248698,170.316771101222,162.86988082852,197.291248410749,109.827122646965,64.7494598089813,72.9690935826981,215.916513970503,155.855781672295,319.477233330554,116.181533389295,174.99066074246,106.534575842907,81.5041622632996,93.1296943597075,206.977460578942,149.983974211764,159.751920707315,146.27626335403,178.37892150823,353.236182235453,79.515512271251,173.103909445481,65.1453169601037,121.618727197497,150.734062434302,188.948351247958,210.295521587519,257.274252999098,89.9399892305325,163.94288790881,151.202260379949,213.111258124063,130.21575893248,138.483966213774,143.281475265117,208.222214863724,184.868017842578,149.611551272156,162.0348173125,148.596953490979,148.624236673562,160.790121361104,168.214371754146,62.9641514359488,121.160795346493,252.114697256833,382.304851446239,151.50250255866,144.887246011735,83.9504269917074,100.086897560831,155.389312470103,94.4997390522494,173.324375868512,134.00405785958,154.615549504643,136.272212445598,173.452653536785,134.174393068447,101.768013318024,158.571561594515,81.8565211370141,120.33470137408,121.420645411419,178.668853264703,136.914210125534,125.318386158365,120.096501087347,146.669912348572,144.945639872473,112.371401683424,82.5997234720331,117.338705296671,122.590035697374,130.25340995673,129.990962989275,105.217794815137,62.4111284019669,172.094485562798,174.961535188465,223.778572591018,232.648331944021,272.148564589434,170.361792057375,134.193413302169,142.919540720905,186.948283781408,140.532241439602,132.871546702214,200.089661309684,142.064340750751,133.892010617344,165.346821835921,293.105307249202,212.372189847002,296.957596998795,100.136477509246,137.595810334868,105.751393295971,143.916970409176,85.2309879103777,124.901365897327,193.27025260459,432.746750041835,221.364797250411,196.750445961875,135.536255009095,370.21678355953,200.62056541513,133.899617746214,84.0646250728483,141.623485253613,185.657190543221,134.699939782096,419.598535316375,437.827942668385,63.2777705644611,38.1426952176957,50.3859640158789,163.096871136992,79.2875645098617,105.622447445578,107.918019856932,142.991897748869,316.674092990464,56.6562723580335,79.067493743877,97.6515424197036,83.7336929352546,102.256371075368,84.0077141485396,111.922608688575,134.800064291554,177.915343863613,151.979034215512,113.229332807157,84.8904504912817,169.093675192804,212.748513590641,135.382475625474,120.739782517764,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| |||
|short_description=p1@EEF1D | |||
}} |
Revision as of 00:19, 23 January 2014
Short description: | p1@EEF1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EEF1D_5end |
Coexpression cluster: | C884_Mesenchymal_Alveolar_Smooth_Renal_Pericytes_Fibroblast_Hepatic |
Association with transcript: | 0bp_to_ENST00000356793, ENST00000442189, ENST00000524624, ENST00000524900, ENST00000525261, ENST00000526838, ENST00000528303, ENST00000529832, ENST00000530306, ENST00000530545, ENST00000531770, ENST00000531931, ENST00000532596, ENST00000534475, ENST00000534804_5end |
EntrezGene: | EEF1D |
HGNC: | 3211 |
UniProt: | F8W934P29692Q4VBZ6E9PLS6E9PLT8E9PBQ9E9PLL8E9PNC8E9PKH7E9PLA1E9PNW6E9PN71E9PL21E9PM66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.22e-09 | 52 |
mature alpha-beta T cell | 1.61e-08 | 18 |
alpha-beta T cell | 1.61e-08 | 18 |
immature T cell | 1.61e-08 | 18 |
mature T cell | 1.61e-08 | 18 |
immature alpha-beta T cell | 1.61e-08 | 18 |
lymphocyte | 2.13e-08 | 53 |
common lymphoid progenitor | 2.13e-08 | 53 |
muscle cell | 4.16e-08 | 55 |
mesodermal cell | 4.68e-08 | 121 |
smooth muscle cell | 5.51e-08 | 43 |
smooth muscle myoblast | 5.51e-08 | 43 |
muscle precursor cell | 2.83e-07 | 58 |
myoblast | 2.83e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.83e-07 | 58 |
vascular associated smooth muscle cell | 6.31e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.60e-11 | 117 |
epithelial vesicle | 1.85e-10 | 78 |
cardiovascular system | 3.91e-10 | 109 |
circulatory system | 4.33e-10 | 112 |
splanchnic layer of lateral plate mesoderm | 1.39e-09 | 83 |
multilaminar epithelium | 6.22e-09 | 83 |
unilaminar epithelium | 1.44e-08 | 148 |
somite | 1.75e-08 | 71 |
presomitic mesoderm | 1.75e-08 | 71 |
presumptive segmental plate | 1.75e-08 | 71 |
dermomyotome | 1.75e-08 | 71 |
trunk paraxial mesoderm | 1.75e-08 | 71 |
paraxial mesoderm | 5.86e-08 | 72 |
presumptive paraxial mesoderm | 5.86e-08 | 72 |
dense mesenchyme tissue | 6.92e-08 | 73 |
trunk mesenchyme | 1.19e-07 | 122 |
epithelial tube open at both ends | 1.30e-07 | 59 |
blood vessel | 1.30e-07 | 59 |
blood vasculature | 1.30e-07 | 59 |
vascular cord | 1.30e-07 | 59 |
artery | 1.43e-07 | 42 |
arterial blood vessel | 1.43e-07 | 42 |
arterial system | 1.43e-07 | 42 |
skeletal muscle tissue | 1.54e-07 | 62 |
striated muscle tissue | 1.54e-07 | 62 |
myotome | 1.54e-07 | 62 |
muscle tissue | 2.07e-07 | 64 |
musculature | 2.07e-07 | 64 |
musculature of body | 2.07e-07 | 64 |
vasculature | 2.28e-07 | 78 |
vascular system | 2.28e-07 | 78 |
mesenchyme | 2.67e-07 | 160 |
entire embryonic mesenchyme | 2.67e-07 | 160 |
vessel | 6.27e-07 | 68 |