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FFCP PHASE1:Mm9::chr6:54942904..54942915,-: Difference between revisions

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{{FFCP|EntrezGene=110175|HGNC=|UniProt=Q9D7X8|association_with_transcript=28bp_to_ENSMUST00000131475_5end|description=CAGE_peak_3_at_Ggct_5end|id=chr6:54942904..54942915,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.42e-09!34;UBERON:0001049!3.39e-08!52;UBERON:0005068!3.39e-08!52;UBERON:0006241!3.39e-08!52;UBERON:0007135!3.39e-08!52;UBERON:0000955!6.13e-08!50;UBERON:0006238!6.13e-08!50;UBERON:0002791!1.52e-07!29;UBERON:0003528!1.52e-07!29;UBERON:0001893!1.52e-07!29;UBERON:0002616!1.55e-07!49;UBERON:0000033!9.00e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.97e-12,54;UBERON:0001049,1.40e-10,52;UBERON:0005068,1.40e-10,52;UBERON:0006241,1.40e-10,52;UBERON:0007135,1.40e-10,52;UBERON:0002020,1.45e-10,34;UBERON:0002346,9.04e-09,64;UBERON:0003075,9.04e-09,64;UBERON:0007284,9.04e-09,64;UBERON:0000955,1.77e-08,47;UBERON:0006238,1.77e-08,47;UBERON:0003528,2.30e-08,29;UBERON:0002791,2.30e-08,29;UBERON:0001893,2.30e-08,29;UBERON:0001016,5.37e-08,75;UBERON:0002616,5.39e-08,46;UBERON:0010371,1.38e-07,73;UBERON:0002619,1.97e-07,17;UBERON:0001017,3.30e-07,73;UBERON:0002021,3.80e-07,10;UBERON:0000411,3.80e-07,10;UBERON:0001950,3.80e-07,10;UBERON:0000956,6.18e-07,21;UBERON:0001869,6.18e-07,21;UBERON:0000203,6.18e-07,21;UBERON:0003080,7.55e-07,40|phase1_expression=0.480446541314382,0,0,0.60492842261366,0,0.33575854382378,0.467225281191051,2.45334314538995,0.140788722151667,0,1.02730780935303,1.11681022593471,2.9104124088305,2.53519167015092,0.666219523631325,1.01237633694913,0.699561878128147,3.62781490161973,3.29074640653773,2.54633791078818,2.04103896362567,0.595745707205312,0.783599367416806,0.799962113967033,0.91763712426868,0,0.430761996159075,0.861884930743556,0.760093677825496,1.76421090831952,1.33038306393183,0,0,0,1.44425809875637,1.66234645358492,2.04169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.608261587317087,0.367093504323363,0.782391344348039,0,0.659058548203415,0.388859798148567,0.55994568650145,0,1.00669563634642,2.17608642603403,0.672187598284928,0,0,0,1.01158230429799,1.05798195854407,0,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,1.45165457231869,0.810035629990144,0.841299845405528,3.99911378165325,1.76694832761291,1.83736198822431,1.62937300731002,2.75765635983006,6.60695285996332,3.83062014255563,3.37934373163736,1.05509030184155,0.640413505216868,0,3.90856198601933,1.68828783009504,2.29197371665215,1.76777151284201,1.70846016958924,1.67759501242771,3.02904773332736,1.88928900266964,0.869593466105033,2.58127163094416,0.679971333707751,1.61910957491345,1.94932925234301,0.448026887097336,1.26399978118577,0.511290967734173,0,0,0.14084341977668,0,0,0,0.432982082022428,0.253359865475099,0,1.7127581957859,3.6251303710604,0.29688427812965,0.173485326766136,0,0.461230994512117,0.904335843315735,1.17588707135705,0.628332956648377,0.247194967734374,1.15679485535929,0,0.161766849947409,1.10420759230197,0.969750506270444,0,1.75668478206928,3.35114730901528,1.27728527604296,1.7972268675888,1.19980546198682,1.14363204365758,6.44099749440738,4.11750542536764,2.1361239859187,3.82413504423008,2.04572365864264,4.77912502486988,4.38051410282946,0.203678727700633,0.373220911830279,2.0217820674694,2.73574412652416,1.69156575851515,0.459804208866946,0.720248519221397,0.60281927134286,0.816437989815934,1.2811372028485,0.374806898238915,2.32833033665114,0.215567992932842,0.756424320671277,0.351902248327898,0.43839146485515,0.834141747676794,1.74126083261083,1.23469281844766,0.59710280045548,1.40442637462647,1.02939162845886,1.42081749697796,0.207125772535502,0.234526059981096,0.540186184383045,0,0.590292695242212,0,0,0.268273401399619,0.350296027101508,0.329119699826961,1.64167464079095,1.13496333364198,1.75439984910399,0.658650345873152,0.536825675041487,6.72927835405207,1.13195073617213,0.660837565967596,0.264450566663544,0.639864751605702,0.232236671860439,0.902072229254653,1.61346819698674,1.11189021922435,0.760902504450237,0,0.823494773620054,0.251335208800269,0.397912944082302,0.779856348476481,1.79763881730844,0.864552199498777,1.59313018603494,0.758671603812327,0.913988100877831,2.25415471346161,0.203651327845314,0.193952487167626,0.280543279561274,0.758838445491087,1.32849133181642,0.941992367048249,0.863780147452604,1.1858105083486,1.33476084572875,1.17935397067922,0.899448449539415,1.21716072833102,0.482354319504834,0,0,0.162135226775035,0.274561413188081,1.43768206527355,1.48856379067401,2.49630138491648,1.01031551178845,0.896987067609561,0,1.66277871149944,0.568474235311454,0.651859905768103,0.509235257325564,0.469380496577004,0.167506257441816,0,0.585400943573396,0.472905432318573,0.221464689648775,0.797273843287435,0.491589944147214,0.345369963731791,0.578596234326046,0,0.54390568381871,1.96705709207614,0.275936746304732,4.33486592967038,3.7507739709505,0.491804836130026,0.5049418544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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:110175
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9D7X8
|association_with_transcript=28bp_to_ENSMUST00000131475_5end
|cluster_id=chr6:54942904..54942915,-
|description=CAGE_peak_3_at_Ggct_5end
|id=chr6:54942904..54942915,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.97e-12,54;UBERON:0001049,1.40e-10,52;UBERON:0005068,1.40e-10,52;UBERON:0006241,1.40e-10,52;UBERON:0007135,1.40e-10,52;UBERON:0002020,1.45e-10,34;UBERON:0002346,9.04e-09,64;UBERON:0003075,9.04e-09,64;UBERON:0007284,9.04e-09,64;UBERON:0000955,1.77e-08,47;UBERON:0006238,1.77e-08,47;UBERON:0003528,2.30e-08,29;UBERON:0002791,2.30e-08,29;UBERON:0001893,2.30e-08,29;UBERON:0001016,5.37e-08,75;UBERON:0002616,5.39e-08,46;UBERON:0010371,1.38e-07,73;UBERON:0002619,1.97e-07,17;UBERON:0001017,3.30e-07,73;UBERON:0002021,3.80e-07,10;UBERON:0000411,3.80e-07,10;UBERON:0001950,3.80e-07,10;UBERON:0000956,6.18e-07,21;UBERON:0001869,6.18e-07,21;UBERON:0000203,6.18e-07,21;UBERON:0003080,7.55e-07,40
|phase1_expression=0.480446541314382,0,0,0.60492842261366,0,0.33575854382378,0.467225281191051,2.45334314538995,0.140788722151667,0,1.02730780935303,1.11681022593471,2.9104124088305,2.53519167015092,0.666219523631325,1.01237633694913,0.699561878128147,3.62781490161973,3.29074640653773,2.54633791078818,2.04103896362567,0.595745707205312,0.783599367416806,0.799962113967033,0.91763712426868,0,0.430761996159075,0.861884930743556,0.760093677825496,1.76421090831952,1.33038306393183,0,0,0,1.44425809875637,1.66234645358492,2.04169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.608261587317087,0.367093504323363,0.782391344348039,0,0.659058548203415,0.388859798148567,0.55994568650145,0,1.00669563634642,2.17608642603403,0.672187598284928,0,0,0,1.01158230429799,1.05798195854407,0,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,1.45165457231869,0.810035629990144,0.841299845405528,3.99911378165325,1.76694832761291,1.83736198822431,1.62937300731002,2.75765635983006,6.60695285996332,3.83062014255563,3.37934373163736,1.05509030184155,0.640413505216868,0,3.90856198601933,1.68828783009504,2.29197371665215,1.76777151284201,1.70846016958924,1.67759501242771,3.02904773332736,1.88928900266964,0.869593466105033,2.58127163094416,0.679971333707751,1.61910957491345,1.94932925234301,0.448026887097336,1.26399978118577,0.511290967734173,0,0,0.14084341977668,0,0,0,0.432982082022428,0.253359865475099,0,1.7127581957859,3.6251303710604,0.29688427812965,0.173485326766136,0,0.461230994512117,0.904335843315735,1.17588707135705,0.628332956648377,0.247194967734374,1.15679485535929,0,0.161766849947409,1.10420759230197,0.969750506270444,0,1.75668478206928,3.35114730901528,1.27728527604296,1.7972268675888,1.19980546198682,1.14363204365758,6.44099749440738,4.11750542536764,2.1361239859187,3.82413504423008,2.04572365864264,4.77912502486988,4.38051410282946,0.203678727700633,0.373220911830279,2.0217820674694,2.73574412652416,1.69156575851515,0.459804208866946,0.720248519221397,0.60281927134286,0.816437989815934,1.2811372028485,0.374806898238915,2.32833033665114,0.215567992932842,0.756424320671277,0.351902248327898,0.43839146485515,0.834141747676794,1.74126083261083,1.23469281844766,0.59710280045548,1.40442637462647,1.02939162845886,1.42081749697796,0.207125772535502,0.234526059981096,0.540186184383045,0,0.590292695242212,0,0,0.268273401399619,0.350296027101508,0.329119699826961,1.64167464079095,1.13496333364198,1.75439984910399,0.658650345873152,0.536825675041487,6.72927835405207,1.13195073617213,0.660837565967596,0.264450566663544,0.639864751605702,0.232236671860439,0.902072229254653,1.61346819698674,1.11189021922435,0.760902504450237,0,0.823494773620054,0.251335208800269,0.397912944082302,0.779856348476481,1.79763881730844,0.864552199498777,1.59313018603494,0.758671603812327,0.913988100877831,2.25415471346161,0.203651327845314,0.193952487167626,0.280543279561274,0.758838445491087,1.32849133181642,0.941992367048249,0.863780147452604,1.1858105083486,1.33476084572875,1.17935397067922,0.899448449539415,1.21716072833102,0.482354319504834,0,0,0.162135226775035,0.274561413188081,1.43768206527355,1.48856379067401,2.49630138491648,1.01031551178845,0.896987067609561,0,1.66277871149944,0.568474235311454,0.651859905768103,0.509235257325564,0.469380496577004,0.167506257441816,0,0.585400943573396,0.472905432318573,0.221464689648775,0.797273843287435,0.491589944147214,0.345369963731791,0.578596234326046,0,0.54390568381871,1.96705709207614,0.275936746304732,4.33486592967038,3.7507739709505,0.491804836130026,0.504941854408746,0.315508219416257,0.390438744296638,0.861693590931196,0.955875191810208,0.445597348164788,0.566153061577665,0.404810701674894,0,0,2.57057053137446,0.851640511249612,0.35613120733451,0.81443479676788,0.494910368917606,1.32745138339963,0.485561272309963,1.51161778482376,0.754420319023592,1.47650946440386,0.307435147943927,1.55056975900933,2.18120237686503,1.78248689192361,2.21225730555071,0,2.06271086496374,1.02131881726136,0.18006109403131,0.517434735131018,0,0.354680467284547,0,0.658196082408484,0,0.704015124191131,0.21183207086382,0,1.48397627647332,0.645857706783622,1.26657142349127,0.716234064018819,0.820704498725306,0.874442509889552,3.33765543618917,1.36696704638282,0.412773735926445,1.66675074632741,0.941842285023455,1.0935538217682,1.14389086603261,1.18984900995699,0.839708713941948,1.10559979043539,0,0.474503990371703,0.609958401380546,1.18805874903981,0.209088296014469,0.218362563746178,0.404593039154462,0.909188012978695,0.523511883968059,0.259229946583586,0.621339313086926,1.12738587736838,2.8408143748356,2.81279433777066,1.16670713006429,0.387479470433193,1.520605129417,0.704143431874524,1.5624526181274,3.14578033277133,2.41584120826006,4.03242008761012,1.58005560314089,1.01362607645082,1.23253148597793,1.68897069871134,1.07416017400489,0.79472541912506,0.841368146639782,1.77227432609493,0.908698049533329,0.838274873204998,0.907435666231565,1.26695244961678,0.962118416403295,1.16876902181569,0.680191150845634,1.99787358036658,2.24284641523689,1.34307693091263,1.15913756419314,1.50145980360946,0.36630324853453,1.50057865355346,1.00314420807073,5.0827665835536,3.22227665555024,4.58316410751517,2.749650917499,1.37016503954128,1.5107877947794,1.35004500046361,4.5032120322422,3.62513927187364,4.14208249401456,1.14166082342594,0.399024873401031,0.853668028770671,1.21553358534147,1.04806581313991,1.83843508450014,0.888986911206461,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.655490552289177,1.02440243847791,1.14870937911227,0.952587382566147,0.579421629724277,0.578727661391115,0.824171801606613,0.441596760403192,1.02860775715625,0.887379030796687,0.953744759789284,0.726732083161643,0.752875043322645,1.18460451048347,1.82927972872773,0.526139422875686,1.35804113845862,1.68342681497322,1.30498519936592,0.29551344712669,0.409231043169689,1.23949472948773,0.192906610981141,0,1.16965804222704,0.429742108096597,0.191288332068843,0.220591419119515,0.695603506861264
|short_description=p3@Ggct
}}

Revision as of 23:38, 5 August 2015

Short description:p3@Ggct
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ggct_5end
Coexpression cluster:NA
Association with transcript: 28bp_to_ENSMUST00000131475_5end
EntrezGene:110175
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ggct

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D93.03
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.97e-1254
neural tube1.40e-1052
neural rod1.40e-1052
future spinal cord1.40e-1052
neural keel1.40e-1052
gray matter1.45e-1034
neurectoderm9.04e-0964
neural plate9.04e-0964
presumptive neural plate9.04e-0964
brain1.77e-0847
future brain1.77e-0847
brain grey matter2.30e-0829
regional part of telencephalon2.30e-0829
telencephalon2.30e-0829
nervous system5.37e-0875
regional part of brain5.39e-0846
ecto-epithelium1.38e-0773
regional part of cerebral cortex1.97e-0717
central nervous system3.30e-0773
occipital lobe3.80e-0710
visual cortex3.80e-0710
neocortex3.80e-0710
cerebral cortex6.18e-0721
cerebral hemisphere6.18e-0721
pallium6.18e-0721
anterior neural tube7.55e-0740
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