FFCP PHASE1:Hg19::chr13:107220455..107220517,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=55082 | |EntrezGene=entrezgene:55082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=25482 | |HGNC=HGNC:25482 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9NWB6,E7EUG0 | |UniProt=uniprot:Q9NWB6,uniprot:E7EUG0 | ||
|association_with_transcript=0bp_to_ENST00000400198,ENST00000426600,NM_018011,uc001vqk.3_5end | |association_with_transcript=0bp_to_ENST00000400198,ENST00000426600,NM_018011,uc001vqk.3_5end | ||
|cluster_id=chr13:107220455..107220517,- | |||
|coexpression_cluster_id=C986 | |coexpression_cluster_id=C986 | ||
|description=CAGE_peak_1_at_ARGLU1_5end | |description=CAGE_peak_1_at_ARGLU1_5end |
Revision as of 14:22, 24 July 2015
Short description: | p1@ARGLU1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARGLU1_5end |
Coexpression cluster: | C986_cerebellum_CD4_granulocyte_Mast_pineal_non_pituitary |
Association with transcript: | 0bp_to_ENST00000400198, ENST00000426600, NM_018011, uc001vqk.3_5end |
EntrezGene: | 55082 |
HGNC: | 25482 |
UniProt: | Q9NWB6E7EUG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ARGLU1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.38e-19 | 168 |
hematopoietic cell | 4.24e-18 | 177 |
leukocyte | 8.30e-18 | 136 |
lymphocyte | 3.14e-17 | 53 |
common lymphoid progenitor | 3.14e-17 | 53 |
hematopoietic oligopotent progenitor cell | 5.37e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.37e-17 | 161 |
lymphoid lineage restricted progenitor cell | 5.50e-17 | 52 |
nongranular leukocyte | 2.30e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.95e-13 | 120 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 4.10e-18 | 56 |
neural rod | 4.10e-18 | 56 |
future spinal cord | 4.10e-18 | 56 |
neural keel | 4.10e-18 | 56 |
adult organism | 7.72e-18 | 114 |
regional part of nervous system | 4.72e-17 | 53 |
regional part of brain | 4.72e-17 | 53 |
nervous system | 6.46e-17 | 89 |
regional part of forebrain | 2.66e-16 | 41 |
forebrain | 2.66e-16 | 41 |
Showing 1 to 10 of 28 entries