FFCP PHASE1:Hg19::chr5:135382108..135382117,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.90e-28!180;CL:0002371!1.76e-20!591;CL:0000144!3.98e-18!625;CL:0000548!1.60e-17!679;CL:0000004!1.60e-17!679;CL:0000255!1.60e-17!679;CL:0000680!4.42e-17!57;CL:0000056!4.42e-17!57;CL:0000355!4.42e-17!57;CL:0000012!6.55e-17!682;CL:0000187!2.47e-15!54;CL:0000057!8.32e-15!75;CL:0000192!2.19e-14!42;CL:0000514!2.19e-14!42;CL:0000048!2.78e-14!430;CL:0000723!5.41e-14!436;CL:0000183!9.22e-14!59;CL:0000034!6.10e-13!444;CL:0000359!6.64e-13!32;CL:0000393!1.49e-12!60;CL:0000211!1.49e-12!60;CL:0000003!1.91e-11!722;CL:0002334!8.51e-09!12;CL:0002620!1.98e-07!23;CL:0000222!4.64e-07!119 | |ontology_enrichment_celltype=CL:0000055!5.90e-28!180;CL:0002371!1.76e-20!591;CL:0000144!3.98e-18!625;CL:0000548!1.60e-17!679;CL:0000004!1.60e-17!679;CL:0000255!1.60e-17!679;CL:0000680!4.42e-17!57;CL:0000056!4.42e-17!57;CL:0000355!4.42e-17!57;CL:0000012!6.55e-17!682;CL:0000187!2.47e-15!54;CL:0000057!8.32e-15!75;CL:0000192!2.19e-14!42;CL:0000514!2.19e-14!42;CL:0000048!2.78e-14!430;CL:0000723!5.41e-14!436;CL:0000183!9.22e-14!59;CL:0000034!6.10e-13!444;CL:0000359!6.64e-13!32;CL:0000393!1.49e-12!60;CL:0000211!1.49e-12!60;CL:0000003!1.91e-11!722;CL:0002334!8.51e-09!12;CL:0002620!1.98e-07!23;CL:0000222!4.64e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.29e-14;32!CL:0002334;5.98e-13;12!CL:0000192;1.00e-10;43!CL:0002620;1.10e-09;23!CL:0000187;8.19e-09;55!CL:0000499;1.46e-07;28!CL:0000393;4.92e-07;61!CL:0000211;4.92e-07;61!CL:0000057;5.74e-07;73 | |ontology_enrichment_celltype_v019=CL:0000359;1.29e-14;32!CL:0002334;5.98e-13;12!CL:0000192;1.00e-10;43!CL:0002620;1.10e-09;23!CL:0000187;8.19e-09;55!CL:0000499;1.46e-07;28!CL:0000393;4.92e-07;61!CL:0000211;4.92e-07;61!CL:0000057;5.74e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.03e-19,427;CL:0000723,1.40e-18,433;CL:0000034,1.68e-17,441;CL:0000680,3.21e-17,58;CL:0000056,3.21e-17,58;CL:0000355,3.21e-17,58;CL:0000057,4.31e-17,76;CL:0000359,9.88e-16,32;CL:0000187,7.78e-15,55;CL:0000192,3.72e-14,43;CL:0000514,3.72e-14,43;CL:0002334,4.44e-13,12;CL:0000393,2.57e-12,61;CL:0000211,2.57e-12,61;CL:0002620,1.44e-09,23;CL:0000134,2.61e-08,354;CL:0002320,5.63e-08,361;CL:0000499,1.68e-07,28;CL:0000219,3.10e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;1.00e-10;43!CL:0000355;1.90e-09;58 | |ontology_enrichment_development_v019=CL:0000514;1.00e-10;43!CL:0000355;1.90e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.93e-07;5!DOID:450;3.93e-07;5!DOID:66;3.93e-07;5!DOID:423;3.93e-07;5!DOID:0080000;3.93e-07;5!DOID:11722;3.93e-07;5 | |ontology_enrichment_disease_v019=DOID:17;3.93e-07;5!DOID:450;3.93e-07;5!DOID:66;3.93e-07;5!DOID:423;3.93e-07;5!DOID:0080000;3.93e-07;5!DOID:11722;3.93e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.60e-07,5;DOID:450,3.60e-07,5;DOID:66,3.60e-07,5;DOID:423,3.60e-07,5;DOID:0080000,3.60e-07,5;DOID:11722,3.60e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!6.24e-16!61;UBERON:0002036!6.24e-16!61;UBERON:0003082!6.24e-16!61;UBERON:0000486!1.27e-15!82;UBERON:0004290!7.26e-15!70;UBERON:0002385!9.90e-15!63;UBERON:0001015!9.90e-15!63;UBERON:0000383!9.90e-15!63;UBERON:0000914!1.51e-13!83;UBERON:0002329!1.51e-13!83;UBERON:0003077!1.51e-13!83;UBERON:0003059!1.51e-13!83;UBERON:0007282!1.51e-13!83;UBERON:0009618!1.51e-13!83;UBERON:0007285!1.51e-13!83;UBERON:0002204!7.29e-13!167;UBERON:0000490!3.28e-10!138;UBERON:0001637!6.48e-10!42;UBERON:0003509!6.48e-10!42;UBERON:0004572!6.48e-10!42;UBERON:0005256!4.14e-09!143;UBERON:0000468!1.10e-08!659;UBERON:0000926!2.09e-08!448;UBERON:0004120!2.09e-08!448;UBERON:0006603!2.09e-08!448;UBERON:0004573!5.51e-08!33;UBERON:0004571!5.51e-08!33;UBERON:0002049!5.61e-08!79;UBERON:0007798!5.61e-08!79;UBERON:0004535!5.72e-08!110;UBERON:0002100!1.54e-07!216;UBERON:0000467!2.91e-07!625;UBERON:0001009!3.24e-07!113;UBERON:0000480!3.94e-07!626 | |ontology_enrichment_uberon=UBERON:0001134!6.24e-16!61;UBERON:0002036!6.24e-16!61;UBERON:0003082!6.24e-16!61;UBERON:0000486!1.27e-15!82;UBERON:0004290!7.26e-15!70;UBERON:0002385!9.90e-15!63;UBERON:0001015!9.90e-15!63;UBERON:0000383!9.90e-15!63;UBERON:0000914!1.51e-13!83;UBERON:0002329!1.51e-13!83;UBERON:0003077!1.51e-13!83;UBERON:0003059!1.51e-13!83;UBERON:0007282!1.51e-13!83;UBERON:0009618!1.51e-13!83;UBERON:0007285!1.51e-13!83;UBERON:0002204!7.29e-13!167;UBERON:0000490!3.28e-10!138;UBERON:0001637!6.48e-10!42;UBERON:0003509!6.48e-10!42;UBERON:0004572!6.48e-10!42;UBERON:0005256!4.14e-09!143;UBERON:0000468!1.10e-08!659;UBERON:0000926!2.09e-08!448;UBERON:0004120!2.09e-08!448;UBERON:0006603!2.09e-08!448;UBERON:0004573!5.51e-08!33;UBERON:0004571!5.51e-08!33;UBERON:0002049!5.61e-08!79;UBERON:0007798!5.61e-08!79;UBERON:0004535!5.72e-08!110;UBERON:0002100!1.54e-07!216;UBERON:0000467!2.91e-07!625;UBERON:0001009!3.24e-07!113;UBERON:0000480!3.94e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.29e-08;33!UBERON:0004571;1.29e-08;33!UBERON:0004457;2.25e-08;9!UBERON:0000042;2.25e-08;9!UBERON:0001637;4.09e-08;42!UBERON:0003509;4.09e-08;42!UBERON:0004572;4.09e-08;42!UBERON:0003688;1.44e-07;6!UBERON:0002358;1.44e-07;6!UBERON:0003684;1.44e-07;6!UBERON:0001178;1.44e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.29e-08;33!UBERON:0004571;1.29e-08;33!UBERON:0004457;2.25e-08;9!UBERON:0000042;2.25e-08;9!UBERON:0001637;4.09e-08;42!UBERON:0003509;4.09e-08;42!UBERON:0004572;4.09e-08;42!UBERON:0003688;1.44e-07;6!UBERON:0002358;1.44e-07;6!UBERON:0003684;1.44e-07;6!UBERON:0001178;1.44e-07;6 | ||
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| ||
|short_description=p15@TGFBI | |short_description=p15@TGFBI | ||
}} | }} |
Revision as of 16:48, 18 November 2012
Short description: | p15@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 84bp_to_uc011cyb.1_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.03e-19 | 427 |
somatic stem cell | 1.40e-18 | 433 |
stem cell | 1.68e-17 | 441 |
muscle precursor cell | 3.21e-17 | 58 |
myoblast | 3.21e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.21e-17 | 58 |
fibroblast | 4.31e-17 | 76 |
vascular associated smooth muscle cell | 9.88e-16 | 32 |
muscle cell | 7.78e-15 | 55 |
smooth muscle cell | 3.72e-14 | 43 |
smooth muscle myoblast | 3.72e-14 | 43 |
preadipocyte | 4.44e-13 | 12 |
electrically responsive cell | 2.57e-12 | 61 |
electrically active cell | 2.57e-12 | 61 |
skin fibroblast | 1.44e-09 | 23 |
mesenchymal cell | 2.61e-08 | 354 |
connective tissue cell | 5.63e-08 | 361 |
stromal cell | 1.68e-07 | 28 |
motile cell | 3.10e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.54e-15 | 62 |
striated muscle tissue | 2.54e-15 | 62 |
myotome | 2.54e-15 | 62 |
muscle tissue | 1.81e-14 | 64 |
musculature | 1.81e-14 | 64 |
musculature of body | 1.81e-14 | 64 |
multilaminar epithelium | 4.39e-14 | 83 |
somite | 1.06e-12 | 71 |
presomitic mesoderm | 1.06e-12 | 71 |
presumptive segmental plate | 1.06e-12 | 71 |
dermomyotome | 1.06e-12 | 71 |
trunk paraxial mesoderm | 1.06e-12 | 71 |
paraxial mesoderm | 2.30e-12 | 72 |
presumptive paraxial mesoderm | 2.30e-12 | 72 |
dense mesenchyme tissue | 4.90e-12 | 73 |
artery | 2.14e-11 | 42 |
arterial blood vessel | 2.14e-11 | 42 |
arterial system | 2.14e-11 | 42 |
epithelial vesicle | 1.54e-10 | 78 |
systemic artery | 5.81e-10 | 33 |
systemic arterial system | 5.81e-10 | 33 |
connective tissue | 2.82e-08 | 371 |
musculoskeletal system | 2.91e-08 | 167 |
trunk mesenchyme | 1.58e-07 | 122 |
omentum | 1.76e-07 | 6 |
peritoneum | 1.76e-07 | 6 |
abdominal cavity | 1.76e-07 | 6 |
visceral peritoneum | 1.76e-07 | 6 |
vasculature | 2.95e-07 | 78 |
vascular system | 2.95e-07 | 78 |
unilaminar epithelium | 7.88e-07 | 148 |
mesoderm | 7.98e-07 | 315 |
mesoderm-derived structure | 7.98e-07 | 315 |
presumptive mesoderm | 7.98e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.60e-07 | 5 |
myotonic disease | 3.60e-07 | 5 |
muscle tissue disease | 3.60e-07 | 5 |
myopathy | 3.60e-07 | 5 |
muscular disease | 3.60e-07 | 5 |
myotonic dystrophy | 3.60e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.