FFCP PHASE1:Hg19::chr11:65430586..65430593,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!4.72e-16!42;CL:0000860!4.02e-15!45;CL:0000766!9.98e-10!76;CL:0002371!9.43e-09!591;CL:0000222!1.10e-08!119;CL:0000144!1.60e-08!625;CL:0000557!3.87e-08!71;CL:0002009!4.54e-08!65;CL:0000012!9.43e-08!682;CL:0000839!1.02e-07!70;CL:0000548!1.68e-07!679;CL:0000004!1.68e-07!679;CL:0000255!1.68e-07!679;CL:0002194!2.19e-07!63;CL:0000576!2.19e-07!63;CL:0000040!2.19e-07!63;CL:0000559!2.19e-07!63 | |ontology_enrichment_celltype=CL:0002057!4.72e-16!42;CL:0000860!4.02e-15!45;CL:0000766!9.98e-10!76;CL:0002371!9.43e-09!591;CL:0000222!1.10e-08!119;CL:0000144!1.60e-08!625;CL:0000557!3.87e-08!71;CL:0002009!4.54e-08!65;CL:0000012!9.43e-08!682;CL:0000839!1.02e-07!70;CL:0000548!1.68e-07!679;CL:0000004!1.68e-07!679;CL:0000255!1.68e-07!679;CL:0002194!2.19e-07!63;CL:0000576!2.19e-07!63;CL:0000040!2.19e-07!63;CL:0000559!2.19e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-41;33!CL:0002057;2.03e-41;33!CL:0000473;1.84e-28;39!CL:0000234;1.84e-28;39!CL:0000576;2.63e-20;48!CL:0000766;7.69e-15;69!CL:0000763;3.64e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;2.03e-41;33!CL:0002057;2.03e-41;33!CL:0000473;1.84e-28;39!CL:0000234;1.84e-28;39!CL:0000576;2.63e-20;48!CL:0000766;7.69e-15;69!CL:0000763;3.64e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.25e-38,42;CL:0002057,1.25e-38,42;CL:0000473,1.55e-32,48;CL:0000234,1.55e-32,48;CL:0000766,1.51e-29,72;CL:0000557,7.39e-27,67;CL:0000839,1.51e-25,66;CL:0002009,8.38e-25,61;CL:0002194,4.74e-24,59;CL:0000576,4.74e-24,59;CL:0000040,4.74e-24,59;CL:0000559,4.74e-24,59;CL:0000763,8.96e-21,108;CL:0000049,8.96e-21,108;CL:0000738,6.02e-20,136;CL:0002031,4.92e-16,120;CL:0002032,8.70e-15,161;CL:0000837,8.70e-15,161;CL:0000037,1.24e-13,168;CL:0002087,5.06e-13,115;CL:0000988,5.43e-13,177;CL:0000723,1.69e-08,433;CL:0000048,2.05e-08,427;CL:0000134,2.30e-08,354;CL:0000034,5.24e-08,441;CL:0002320,6.82e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-28;42 | |ontology_enrichment_development_v019=CL:0002057;1.62e-28;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.65e-10!216;UBERON:0002204!4.85e-09!167;UBERON:0000055!1.41e-08!69;UBERON:0002371!3.03e-08!80;UBERON:0001474!2.12e-07!86;UBERON:0002193!2.37e-07!112;UBERON:0001981!2.71e-07!60;UBERON:0007500!2.71e-07!60;UBERON:0004537!2.71e-07!60;UBERON:0006965!2.71e-07!60;UBERON:0004765!3.76e-07!101;UBERON:0001434!3.76e-07!101;UBERON:0002049!4.54e-07!79;UBERON:0007798!4.54e-07!79;UBERON:0000926!4.99e-07!448;UBERON:0004120!4.99e-07!448;UBERON:0006603!4.99e-07!448;UBERON:0002405!8.00e-07!115;UBERON:0001637!8.10e-07!42;UBERON:0003509!8.10e-07!42;UBERON:0004572!8.10e-07!42 | |ontology_enrichment_uberon=UBERON:0003081!1.65e-10!216;UBERON:0002204!4.85e-09!167;UBERON:0000055!1.41e-08!69;UBERON:0002371!3.03e-08!80;UBERON:0001474!2.12e-07!86;UBERON:0002193!2.37e-07!112;UBERON:0001981!2.71e-07!60;UBERON:0007500!2.71e-07!60;UBERON:0004537!2.71e-07!60;UBERON:0006965!2.71e-07!60;UBERON:0004765!3.76e-07!101;UBERON:0001434!3.76e-07!101;UBERON:0002049!4.54e-07!79;UBERON:0007798!4.54e-07!79;UBERON:0000926!4.99e-07!448;UBERON:0004120!4.99e-07!448;UBERON:0006603!4.99e-07!448;UBERON:0002405!8.00e-07!115;UBERON:0001637!8.10e-07!42;UBERON:0003509!8.10e-07!42;UBERON:0004572!8.10e-07!42 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.89e-24,76;UBERON:0002405,5.98e-23,93;UBERON:0001474,1.99e-21,82;UBERON:0002193,2.17e-19,108;UBERON:0004765,1.36e-18,90;UBERON:0002390,1.89e-17,98;UBERON:0003061,1.89e-17,98;UBERON:0001434,9.73e-17,100;UBERON:0003081,3.86e-13,203;UBERON:0002204,7.32e-12,167;UBERON:0002384,1.13e-07,371;UBERON:0000926,1.29e-07,315;UBERON:0004120,1.29e-07,315;UBERON:0006603,1.29e-07,315 | |||
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| ||
|short_description=p5@RELA | |short_description=p5@RELA | ||
}} | }} |
Revision as of 01:37, 20 November 2012
Short description: | p5@RELA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RELA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -21bp_to_ENST00000406246_5end |
EntrezGene: | RELA |
HGNC: | 9955 |
UniProt: | Q04206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.25e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-38 | 42 |
defensive cell | 1.55e-32 | 48 |
phagocyte | 1.55e-32 | 48 |
myeloid leukocyte | 1.51e-29 | 72 |
granulocyte monocyte progenitor cell | 7.39e-27 | 67 |
myeloid lineage restricted progenitor cell | 1.51e-25 | 66 |
macrophage dendritic cell progenitor | 8.38e-25 | 61 |
monopoietic cell | 4.74e-24 | 59 |
monocyte | 4.74e-24 | 59 |
monoblast | 4.74e-24 | 59 |
promonocyte | 4.74e-24 | 59 |
myeloid cell | 8.96e-21 | 108 |
common myeloid progenitor | 8.96e-21 | 108 |
leukocyte | 6.02e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 4.92e-16 | 120 |
hematopoietic oligopotent progenitor cell | 8.70e-15 | 161 |
hematopoietic multipotent progenitor cell | 8.70e-15 | 161 |
hematopoietic stem cell | 1.24e-13 | 168 |
nongranular leukocyte | 5.06e-13 | 115 |
hematopoietic cell | 5.43e-13 | 177 |
somatic stem cell | 1.69e-08 | 433 |
multi fate stem cell | 2.05e-08 | 427 |
mesenchymal cell | 2.30e-08 | 354 |
stem cell | 5.24e-08 | 441 |
connective tissue cell | 6.82e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.89e-24 | 76 |
immune system | 5.98e-23 | 93 |
bone element | 1.99e-21 | 82 |
hemolymphoid system | 2.17e-19 | 108 |
skeletal element | 1.36e-18 | 90 |
hematopoietic system | 1.89e-17 | 98 |
blood island | 1.89e-17 | 98 |
skeletal system | 9.73e-17 | 100 |
lateral plate mesoderm | 3.86e-13 | 203 |
musculoskeletal system | 7.32e-12 | 167 |
connective tissue | 1.13e-07 | 371 |
mesoderm | 1.29e-07 | 315 |
mesoderm-derived structure | 1.29e-07 | 315 |
presumptive mesoderm | 1.29e-07 | 315 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.