FFCP PHASE1:Hg19::chr15:35084738..35084747,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000188!1.10e-18!9;CL:0000515!1.85e-08!4;CL:0002617!1.24e-07!2 | |ontology_enrichment_celltype=CL:0000188!1.10e-18!9;CL:0000515!1.85e-08!4;CL:0002617!1.24e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000515;7.77e-12;3!CL:0000680;4.60e-11;7!CL:0000056;4.22e-09;4!CL:0000188;8.52e-09;9 | |ontology_enrichment_celltype_v019=CL:0000515;7.77e-12;3!CL:0000680;4.60e-11;7!CL:0000056;4.22e-09;4!CL:0000188;8.52e-09;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000515,4.23e-09,4;CL:0000188,7.86e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.18e-19;4!UBERON:0007284;1.18e-19;4!UBERON:0010227;4.08e-10;1!UBERON:0010226;5.78e-10;1!UBERON:0000358;7.18e-10;1!UBERON:0004140;8.53e-10;1!UBERON:0005754;1.68e-09;1!CL:0000515;4.22e-09;4!UBERON:0006603;4.59e-08;65 | |ontology_enrichment_development_v019=UBERON:0005062;1.18e-19;4!UBERON:0007284;1.18e-19;4!UBERON:0010227;4.08e-10;1!UBERON:0010226;5.78e-10;1!UBERON:0000358;7.18e-10;1!UBERON:0004140;8.53e-10;1!UBERON:0005754;1.68e-09;1!CL:0000515;4.22e-09;4!UBERON:0006603;4.59e-08;65 | ||
|ontology_enrichment_disease=DOID:114!1.54e-08!2 | |ontology_enrichment_disease=DOID:114!1.54e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:114;8.79e-18;2!DOID:178;1.68e-09;1!DOID:326;1.68e-09;1!DOID:3978;1.68e-09;1!DOID:3394;1.68e-09;1!DOID:5844;1.68e-09;1!DOID:1287;2.36e-09;4 | |ontology_enrichment_disease_v019=DOID:114;8.79e-18;2!DOID:178;1.68e-09;1!DOID:326;1.68e-09;1!DOID:3978;1.68e-09;1!DOID:3394;1.68e-09;1!DOID:5844;1.68e-09;1!DOID:1287;2.36e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,8.80e-18,2;DOID:178,1.76e-09,1;DOID:326,1.76e-09,1;DOID:3978,1.76e-09,1;DOID:3394,1.76e-09,1;DOID:5844,1.76e-09,1;DOID:1287,2.36e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!3.94e-12!3;UBERON:0003978!4.24e-12!3;UBERON:0009751!4.24e-12!3;UBERON:0000946!4.24e-12!3;UBERON:0002523!4.24e-12!3;UBERON:0005983!4.24e-12!3;UBERON:0002165!4.24e-12!3;UBERON:0002062!4.24e-12!3;UBERON:0007280!4.24e-12!3;UBERON:0006947!4.12e-11!3;UBERON:0004054!4.12e-11!3;UBERON:0007100!1.05e-09!27;UBERON:0002081!1.29e-08!2;UBERON:0002133!1.33e-08!2;UBERON:0005904!1.95e-08!4;UBERON:0007023!2.90e-08!115;UBERON:0000341!4.37e-08!2 | |ontology_enrichment_uberon=UBERON:0004151!3.94e-12!3;UBERON:0003978!4.24e-12!3;UBERON:0009751!4.24e-12!3;UBERON:0000946!4.24e-12!3;UBERON:0002523!4.24e-12!3;UBERON:0005983!4.24e-12!3;UBERON:0002165!4.24e-12!3;UBERON:0002062!4.24e-12!3;UBERON:0007280!4.24e-12!3;UBERON:0006947!4.12e-11!3;UBERON:0004054!4.12e-11!3;UBERON:0007100!1.05e-09!27;UBERON:0002081!1.29e-08!2;UBERON:0002133!1.33e-08!2;UBERON:0005904!1.95e-08!4;UBERON:0007023!2.90e-08!115;UBERON:0000341!4.37e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.21e-26;25!UBERON:0004151;4.64e-26;3!UBERON:0003978;5.50e-26;3!UBERON:0000946;5.50e-26;3!UBERON:0001134;4.30e-18;16!UBERON:0002036;4.30e-18;16!UBERON:0002081;7.11e-18;2!UBERON:0002133;7.74e-18;2!UBERON:0000948;1.69e-13;22!UBERON:0002385;1.04e-11;31!UBERON:0001015;1.04e-11;31!UBERON:0000383;1.04e-11;31!UBERON:0002079;4.08e-10;1!UBERON:0002135;4.46e-10;1!UBERON:0002084;5.78e-10;1!UBERON:0002082;5.78e-10;1!UBERON:0002146;6.31e-10;1!UBERON:0005623;6.31e-10;1!UBERON:0000998;1.68e-09;1!UBERON:0002134;1.68e-09;1!UBERON:0006868;1.68e-09;1!UBERON:0005208;1.68e-09;1!UBERON:0004145;1.68e-09;1!UBERON:0005946;1.68e-09;1!UBERON:0005965;1.68e-09;1!UBERON:0002078;1.68e-09;1!UBERON:0010313;3.51e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0007100;4.21e-26;25!UBERON:0004151;4.64e-26;3!UBERON:0003978;5.50e-26;3!UBERON:0000946;5.50e-26;3!UBERON:0001134;4.30e-18;16!UBERON:0002036;4.30e-18;16!UBERON:0002081;7.11e-18;2!UBERON:0002133;7.74e-18;2!UBERON:0000948;1.69e-13;22!UBERON:0002385;1.04e-11;31!UBERON:0001015;1.04e-11;31!UBERON:0000383;1.04e-11;31!UBERON:0002079;4.08e-10;1!UBERON:0002135;4.46e-10;1!UBERON:0002084;5.78e-10;1!UBERON:0002082;5.78e-10;1!UBERON:0002146;6.31e-10;1!UBERON:0005623;6.31e-10;1!UBERON:0000998;1.68e-09;1!UBERON:0002134;1.68e-09;1!UBERON:0006868;1.68e-09;1!UBERON:0005208;1.68e-09;1!UBERON:0004145;1.68e-09;1!UBERON:0005946;1.68e-09;1!UBERON:0005965;1.68e-09;1!UBERON:0002078;1.68e-09;1!UBERON:0010313;3.51e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.76e-26,3;UBERON:0003978,4.46e-26,3;UBERON:0009751,4.46e-26,3;UBERON:0000946,4.46e-26,3;UBERON:0002523,4.46e-26,3;UBERON:0005983,4.46e-26,3;UBERON:0002165,4.46e-26,3;UBERON:0002062,4.46e-26,3;UBERON:0007280,4.46e-26,3;UBERON:0007100,4.18e-24,27;UBERON:0002081,5.75e-18,2;UBERON:0010227,5.75e-18,2;UBERON:0002133,6.27e-18,2;UBERON:0000948,2.36e-12,24;UBERON:0005498,2.36e-12,24;UBERON:0004140,2.36e-12,24;UBERON:0009881,2.36e-12,24;UBERON:0004141,2.36e-12,24;UBERON:0003084,2.36e-12,24;UBERON:0007005,2.36e-12,24;UBERON:0004139,2.36e-12,24;UBERON:0004291,2.36e-12,24;UBERON:0004797,1.62e-11,7;UBERON:0003103,7.57e-11,68;UBERON:0002079,4.09e-10,1;UBERON:0002135,4.46e-10,1;UBERON:0002084,5.79e-10,1;UBERON:0002082,5.79e-10,1;UBERON:0010226,5.79e-10,1;UBERON:0002146,6.31e-10,1;UBERON:0005623,6.31e-10,1;UBERON:0002134,1.36e-09,1;UBERON:0005208,1.36e-09,1;UBERON:0005946,1.36e-09,1;UBERON:0005965,1.36e-09,1;UBERON:0002078,1.36e-09,1;UBERON:0000998,1.48e-09,1;UBERON:0006868,1.48e-09,1;UBERON:0010313,3.30e-08,10;UBERON:0002342,3.30e-08,10;UBERON:0005062,3.30e-08,10;UBERON:0007023,4.40e-07,114 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0,0.337552664482532,1.16924406193438,0,0,0,0.355009592516614,0.806016785821122,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.02738161275192,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54915532383883,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773365746336976,0.462145851343933,0.767518373630648,1.65403886981437,0,0.870100163485371,1.19317278382541,2.22580089116843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3334488470734,5.04152932825704,1.43574604915363,1.19807400299395,7.72606886645828,3.34757186162809,3.15762320687613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5820784857075,6.62091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0022211730523,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.307988420568741,4.6392577253528,0.485710993059139,0,0,0,0,0,0,0,0,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.426467963801962,1.66645102024618,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,4.69281884806909,0,0.406896178315738,0,1.00636896795513,0 | |phase1_expression=0.363356758541113,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0,0.337552664482532,1.16924406193438,0,0,0,0.355009592516614,0.806016785821122,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.02738161275192,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54915532383883,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773365746336976,0.462145851343933,0.767518373630648,1.65403886981437,0,0.870100163485371,1.19317278382541,2.22580089116843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3334488470734,5.04152932825704,1.43574604915363,1.19807400299395,7.72606886645828,3.34757186162809,3.15762320687613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5820784857075,6.62091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0022211730523,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.307988420568741,4.6392577253528,0.485710993059139,0,0,0,0,0,0,0,0,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.426467963801962,1.66645102024618,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,4.69281884806909,0,0.406896178315738,0,1.00636896795513,0 | ||
|short_description=p6@ACTC1 | |short_description=p6@ACTC1 | ||
}} | }} |
Revision as of 16:56, 20 November 2012
Short description: | p6@ACTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ACTC1_5end |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | -15bp_to_ENST00000560563_5end |
EntrezGene: | ACTC1 |
HGNC: | 143 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 4.23e-09 | 4 |
cell of skeletal muscle | 7.86e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.80e-18 | 2 |
vascular disease | 1.76e-09 | 1 |
ischemia | 1.76e-09 | 1 |
extrinsic cardiomyopathy | 1.76e-09 | 1 |
myocardial ischemia | 1.76e-09 | 1 |
myocardial infarction | 1.76e-09 | 1 |
cardiovascular system disease | 2.36e-09 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.