FFCP PHASE1:Hg19::chr7:108096822..108096889,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=S | |||
|UniProt=F8W775,Q92823,F8W774,C9JYY6,E9PF33,F5GYD3,B7Z670,E9PDA4,Q14BM2 | |UniProt=F8W775,Q92823,F8W774,C9JYY6,E9PF33,F5GYD3,B7Z670,E9PDA4,Q14BM2 | ||
|association_with_transcript=0bp_to_ENST00000379022,ENST00000379028,ENST00000379032,ENST00000413765,ENST00000445979,ENST00000537765,NM_001193582,NM_001193583,NM_001193584,NM_005010,uc003vfb.2,uc003vfc.2,uc003vfd.2,uc003vfe.2,uc011kmk.1_5end | |association_with_transcript=0bp_to_ENST00000379022,ENST00000379028,ENST00000379032,ENST00000413765,ENST00000445979,ENST00000537765,NM_001193582,NM_001193583,NM_001193584,NM_005010,uc003vfb.2,uc003vfc.2,uc003vfd.2,uc003vfe.2,uc011kmk.1_5end | ||
Revision as of 12:46, 10 July 2013
| Short description: | p1@NRCAM |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_NRCAM_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000379022, ENST00000379028, ENST00000379032, ENST00000413765, ENST00000445979, ENST00000537765, NM_001193582, NM_001193583, NM_001193584, NM_005010, uc003vfb.2, uc003vfc.2, uc003vfd.2, uc003vfe.2, uc011kmk.1_5end |
| EntrezGene: | NRCAM |
| HGNC: | 7994 |
| UniProt: | F8W775Q92823F8W774C9JYY6E9PF33F5GYD3B7Z670E9PDA4Q14BM2 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@NRCAM |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of vascular tree | 2.57e-10 | 24 |
| blood vessel endothelial cell | 1.04e-08 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.04e-08 | 18 |
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.61e-36 | 56 |
| neural rod | 1.61e-36 | 56 |
| future spinal cord | 1.61e-36 | 56 |
| neural keel | 1.61e-36 | 56 |
| regional part of nervous system | 1.16e-34 | 53 |
| regional part of brain | 1.16e-34 | 53 |
| tube | 4.09e-34 | 192 |
| anatomical conduit | 4.11e-32 | 240 |
| nervous system | 2.04e-31 | 89 |
| central nervous system | 2.22e-31 | 81 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
