FFCP PHASE1:Hg19::chr10:3819310..3819325,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1316|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=2235|TSSclassifier=N|UniProt=|association_with_transcript=-201bp_to_BC015987_5end|coexpression_cluster_id=C721|description=CAGE_peak_5_at_KLF6_5end|id=chr10:3819310..3819325,-|ontology_enrichment_celltype=CL:0002057!3.37e-20!42;CL:0000860!6.83e-17!45;CL:0002009!1.75e-15!65;CL:0000557!4.95e-15!71;CL:0002194!7.56e-15!63;CL:0000576!7.56e-15!63;CL:0000040!7.56e-15!63;CL:0000559!7.56e-15!63;CL:0000766!1.17e-14!76;CL:0000839!3.47e-14!70;CL:0000738!1.85e-10!140;CL:0002087!1.72e-09!119;CL:0002031!1.79e-09!124;CL:0002371!1.86e-07!591;CL:0000134!5.99e-07!358|ontology_enrichment_celltype_v019=CL:0000860;1.53e-24;33!CL:0002057;1.53e-24;33!CL:0000473;2.65e-19;39!CL:0000234;2.65e-19;39!CL:0000576;3.10e-13;48!CL:0000766;2.27e-11;69!CL:0002087;9.28e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,9.55e-26,42;CL:0002057,9.55e-26,42;CL:0000473,3.10e-24,48;CL:0000234,3.10e-24,48;CL:0000766,4.06e-20,72;CL:0000557,9.46e-20,67;CL:0000839,7.23e-19,66;CL:0002009,1.24e-18,61;CL:0000738,1.35e-18,136;CL:0002194,3.08e-18,59;CL:0000576,3.08e-18,59;CL:0000040,3.08e-18,59;CL:0000559,3.08e-18,59;CL:0002031,3.24e-18,120;CL:0002087,1.29e-17,115;CL:0000037,1.02e-11,168;CL:0002032,1.42e-11,161;CL:0000837,1.42e-11,161;CL:0000988,2.63e-11,177;CL:0000763,4.52e-10,108;CL:0000049,4.52e-10,108;CL:0000134,5.84e-09,354;CL:0002320,1.11e-08,361;CL:0000048,5.15e-08,427;CL:0000723,6.89e-08,433;CL:0000034,1.32e-07,441;CL:0000219,5.48e-07,386|ontology_enrichment_development_v019=CL:0002057;1.28e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.18e-14!80;UBERON:0002390!2.76e-13!102;UBERON:0003061!2.76e-13!102;UBERON:0001474!4.46e-13!86;UBERON:0004765!4.35e-12!101;UBERON:0001434!4.35e-12!101;UBERON:0002193!4.46e-12!112;UBERON:0002405!2.08e-09!115;UBERON:0002204!4.57e-08!167;UBERON:0002384!8.02e-07!375;UBERON:0003081!8.51e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.95e-18,76;UBERON:0001474,1.22e-16,82;UBERON:0002390,3.18e-16,98;UBERON:0003061,3.18e-16,98;UBERON:0002193,5.01e-16,108;UBERON:0002405,4.02e-15,93;UBERON:0004765,8.91e-15,90;UBERON:0001434,9.01e-13,100;UBERON:0003081,5.77e-09,203;UBERON:0002204,1.07e-08,167;UBERON:0002384,3.00e-08,371|phase1_expression=1.2717486548939,1.49870366723688,0.140954404095971,0,1.34088328328186,1.74467704820074,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.655324116390517,1.58260186937072,0,0.331397375727916,3.36162573225888,0,2.19093027116212,2.43966399395253,0,0.204000691244253,0.313454721478088,0.572471974262113,0.547497700291537,0.376627918784408,0.229240217243854,0.0821005894499457,0,2.36018566109342,3.0706351847777,4.4896675761662,0.919421224478927,0,0.369754010166788,0.0774672005803016,0.142169232487422,0.587200878669695,5.53995408531877,13.0353890855592,16.4928261744047,0.671746422719773,0.971680998056939,0,0.872389432677388,1.51150377475524,1.4555043671269,3.71886459049095,4.93401465626191,3.71647645074124,7.19230980805376,3.84241059793651,0.945928919554341,13.7898272294647,9.03678557017357,2.70852973188684,3.57660445130949,1.63743690034707,0.898893937780338,18.0589496498833,3.85114832491312,12.7867425159808,2.30895910130701,2.39356389145958,2.13112375266347,7.54544020434318,1.70215567407342,4.35975574296902,7.5374599577023,3.65038042894141,1.95469960234605,5.44859552370032,2.20966581592539,2.84816148696796,0.633765858935825,0.850417199860174,0.628975936525128,0.44931452458598,3.30389164251314,0.32145117339416,0.855038231223746,0.99458338599545,0.547992461293902,0,0,0,0.853460445133014,0,0,0,0,6.83055562931338,9.39579502993502,13.7618362125082,0,0.560508562981536,1.05353633910031,6.68813218387032,16.5064520354649,4.5232329779892,0,0.32592226663359,0,0,0.557052284425868,2.94605907474837,0.443067789167242,0.270803863765016,0.768547918354051,1.69077151827842,0.986627427622057,0.276350017785848,0.579606171470105,1.18629250529648,1.33770414044857,1.04535523804977,0.226618685395132,0,0,0,0,0,0.950452044448374,0,0.255973222308837,1.24930726552346,0.236777252044017,0,4.03213486449465,10.6976078313403,5.21367853978076,0,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.579386075843295,0,0.486634870302636,0.283604451492204,0.665188192387692,0.175669571386252,0.0654895377488563,0,1.11235332835329,0.649094787309367,0.696518949197069,0.664789802594326,1.43094374583205,0.571994910780128,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0.417989933073621,0.775250277507987,0,0.33472061276467,3.22263453687318,0,1.46437234528902,0.735326160691737,3.24056779152704,0.625098097988558,0,0.225222960966644,0,0,0.366403487860815,0,0,0.872188104285069,1.98788780678127,0.506522046658319,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0.311211035399766,0.808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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2235 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-201bp_to_BC015987_5end | |||
|coexpression_cluster_id=C721 | |||
|description=CAGE_peak_5_at_KLF6_5end | |||
|id=chr10:3819310..3819325,- | |||
|ontology_enrichment_celltype=CL:0002057!3.37e-20!42;CL:0000860!6.83e-17!45;CL:0002009!1.75e-15!65;CL:0000557!4.95e-15!71;CL:0002194!7.56e-15!63;CL:0000576!7.56e-15!63;CL:0000040!7.56e-15!63;CL:0000559!7.56e-15!63;CL:0000766!1.17e-14!76;CL:0000839!3.47e-14!70;CL:0000738!1.85e-10!140;CL:0002087!1.72e-09!119;CL:0002031!1.79e-09!124;CL:0002371!1.86e-07!591;CL:0000134!5.99e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-24;33!CL:0002057;1.53e-24;33!CL:0000473;2.65e-19;39!CL:0000234;2.65e-19;39!CL:0000576;3.10e-13;48!CL:0000766;2.27e-11;69!CL:0002087;9.28e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.55e-26,42;CL:0002057,9.55e-26,42;CL:0000473,3.10e-24,48;CL:0000234,3.10e-24,48;CL:0000766,4.06e-20,72;CL:0000557,9.46e-20,67;CL:0000839,7.23e-19,66;CL:0002009,1.24e-18,61;CL:0000738,1.35e-18,136;CL:0002194,3.08e-18,59;CL:0000576,3.08e-18,59;CL:0000040,3.08e-18,59;CL:0000559,3.08e-18,59;CL:0002031,3.24e-18,120;CL:0002087,1.29e-17,115;CL:0000037,1.02e-11,168;CL:0002032,1.42e-11,161;CL:0000837,1.42e-11,161;CL:0000988,2.63e-11,177;CL:0000763,4.52e-10,108;CL:0000049,4.52e-10,108;CL:0000134,5.84e-09,354;CL:0002320,1.11e-08,361;CL:0000048,5.15e-08,427;CL:0000723,6.89e-08,433;CL:0000034,1.32e-07,441;CL:0000219,5.48e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-14!80;UBERON:0002390!2.76e-13!102;UBERON:0003061!2.76e-13!102;UBERON:0001474!4.46e-13!86;UBERON:0004765!4.35e-12!101;UBERON:0001434!4.35e-12!101;UBERON:0002193!4.46e-12!112;UBERON:0002405!2.08e-09!115;UBERON:0002204!4.57e-08!167;UBERON:0002384!8.02e-07!375;UBERON:0003081!8.51e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.95e-18,76;UBERON:0001474,1.22e-16,82;UBERON:0002390,3.18e-16,98;UBERON:0003061,3.18e-16,98;UBERON:0002193,5.01e-16,108;UBERON:0002405,4.02e-15,93;UBERON:0004765,8.91e-15,90;UBERON:0001434,9.01e-13,100;UBERON:0003081,5.77e-09,203;UBERON:0002204,1.07e-08,167;UBERON:0002384,3.00e-08,371 | |||
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| |||
|short_description=p5@KLF6 | |||
}} |
Revision as of 13:18, 10 September 2013
Short description: | p5@KLF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KLF6_5end |
Coexpression cluster: | C721_CD4_CD14_Neutrophils_Natural_CD8_CD19_Monocytederived |
Association with transcript: | -201bp_to_BC015987_5end |
EntrezGene: | KLF6 |
HGNC: | 2235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.55e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.55e-26 | 42 |
defensive cell | 3.10e-24 | 48 |
phagocyte | 3.10e-24 | 48 |
myeloid leukocyte | 4.06e-20 | 72 |
granulocyte monocyte progenitor cell | 9.46e-20 | 67 |
myeloid lineage restricted progenitor cell | 7.23e-19 | 66 |
macrophage dendritic cell progenitor | 1.24e-18 | 61 |
leukocyte | 1.35e-18 | 136 |
monopoietic cell | 3.08e-18 | 59 |
monocyte | 3.08e-18 | 59 |
monoblast | 3.08e-18 | 59 |
promonocyte | 3.08e-18 | 59 |
hematopoietic lineage restricted progenitor cell | 3.24e-18 | 120 |
nongranular leukocyte | 1.29e-17 | 115 |
hematopoietic stem cell | 1.02e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.42e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-11 | 161 |
hematopoietic cell | 2.63e-11 | 177 |
myeloid cell | 4.52e-10 | 108 |
common myeloid progenitor | 4.52e-10 | 108 |
mesenchymal cell | 5.84e-09 | 354 |
connective tissue cell | 1.11e-08 | 361 |
multi fate stem cell | 5.15e-08 | 427 |
somatic stem cell | 6.89e-08 | 433 |
stem cell | 1.32e-07 | 441 |
motile cell | 5.48e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.95e-18 | 76 |
bone element | 1.22e-16 | 82 |
hematopoietic system | 3.18e-16 | 98 |
blood island | 3.18e-16 | 98 |
hemolymphoid system | 5.01e-16 | 108 |
immune system | 4.02e-15 | 93 |
skeletal element | 8.91e-15 | 90 |
skeletal system | 9.01e-13 | 100 |
lateral plate mesoderm | 5.77e-09 | 203 |
musculoskeletal system | 1.07e-08 | 167 |
connective tissue | 3.00e-08 | 371 |
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