FFCP PHASE1:Hg19::chr10:64468560..64468570,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C7|description=CAGE_peak_at_chr10:64468560..64468570,+|id=chr10:64468560..64468570,+|ontology_enrichment_celltype=CL:0002057!1.94e-139!42;CL:0000860!1.16e-129!45;CL:0002194!4.17e-94!63;CL:0000576!4.17e-94!63;CL:0000040!4.17e-94!63;CL:0000559!4.17e-94!63;CL:0000766!4.09e-91!76;CL:0002009!4.96e-91!65;CL:0000839!4.23e-84!70;CL:0000557!7.89e-83!71;CL:0000763!1.15e-59!112;CL:0000049!1.15e-59!112;CL:0002087!2.70e-55!119;CL:0000738!2.90e-54!140;CL:0002031!3.47e-47!124;CL:0000037!8.62e-43!172;CL:0000566!8.62e-43!172;CL:0002032!2.48e-40!165;CL:0000837!2.48e-40!165;CL:0000988!5.02e-40!182;CL:0002393!5.29e-24!9;CL:0002397!5.29e-24!9;CL:0000134!1.69e-16!358;CL:0002320!4.98e-16!365;CL:0000767!4.98e-15!3;CL:0000219!2.28e-14!390;CL:0000048!2.22e-12!430;CL:0000723!4.26e-12!436;CL:0000034!9.89e-12!444;CL:0000063!4.47e-07!578;CL:0000842!8.25e-07!3|ontology_enrichment_celltype_v019=CL:0000860;3.23e-82;33!CL:0002057;3.23e-82;33!CL:0000473;1.67e-57;39!CL:0000234;1.67e-57;39!CL:0000576;1.22e-49;48!CL:0000766;1.03e-27;69!CL:0000763;1.98e-13;100!CL:0000767;2.12e-12;3!CL:0002087;7.63e-11;104!CL:0000738;2.52e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,8.12e-88,42;CL:0002057,8.12e-88,42;CL:0000473,1.78e-76,48;CL:0000234,1.78e-76,48;CL:0002194,1.36e-60,59;CL:0000576,1.36e-60,59;CL:0000040,1.36e-60,59;CL:0000559,1.36e-60,59;CL:0000766,1.45e-59,72;CL:0002009,1.53e-58,61;CL:0000839,5.96e-54,66;CL:0000557,4.10e-53,67;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0000738,2.76e-30,136;CL:0002087,7.31e-30,115;CL:0002031,1.69e-28,120;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000767,2.00e-12,3;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441|ontology_enrichment_development_v019=CL:0002057;2.30e-66;42!CL:0000049;3.34e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!8.41e-73!80;UBERON:0001474!2.88e-67!86;UBERON:0002390!2.86e-62!102;UBERON:0003061!2.86e-62!102;UBERON:0004765!2.81e-56!101;UBERON:0001434!2.81e-56!101;UBERON:0002193!4.36e-56!112;UBERON:0002405!1.40e-48!115;UBERON:0002204!3.35e-31!167;UBERON:0003081!1.65e-25!216;UBERON:0002384!2.19e-15!375;UBERON:0000926!3.21e-08!448;UBERON:0004120!3.21e-08!448;UBERON:0006603!3.21e-08!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-46,76;UBERON:0001474,5.74e-43,82;UBERON:0004765,6.39e-39,90;UBERON:0002405,1.40e-37,93;UBERON:0002390,1.58e-35,98;UBERON:0003061,1.58e-35,98;UBERON:0001434,9.22e-35,100;UBERON:0002193,5.56e-32,108;UBERON:0002204,1.25e-19,167;UBERON:0003081,1.38e-15,203;UBERON:0002384,5.20e-09,371;UBERON:0000926,7.43e-09,315;UBERON:0004120,7.43e-09,315;UBERON:0006603,7.43e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.96682138424452,0.767658796194425,2.01260960310899,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,2.55671940596253,2.46700732813095,5.26500830521676,7.76769459269806,8.45330331546032,16.3172738623124,2.41321976515633,1.93645405075148,5.41705946377367,0.752969358170419,1.91034305040492,6.29225756446237,2.75475503133812,1.60464513538047,0.639337125799041,1.64925650093358,3.39088217956774,0.852449501065388,0.580418477257168,0,0.622822248995575,4.27122730936464,2.60741459210101,9.77349801173025,0,1.84138817993782,0.949387162322653,0.633765858935825,0.637812899895131,1.04829322754188,0.112328631146495,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:64468560..64468570,+ | |||
|id=chr10:64468560..64468570,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.94e-139!42;CL:0000860!1.16e-129!45;CL:0002194!4.17e-94!63;CL:0000576!4.17e-94!63;CL:0000040!4.17e-94!63;CL:0000559!4.17e-94!63;CL:0000766!4.09e-91!76;CL:0002009!4.96e-91!65;CL:0000839!4.23e-84!70;CL:0000557!7.89e-83!71;CL:0000763!1.15e-59!112;CL:0000049!1.15e-59!112;CL:0002087!2.70e-55!119;CL:0000738!2.90e-54!140;CL:0002031!3.47e-47!124;CL:0000037!8.62e-43!172;CL:0000566!8.62e-43!172;CL:0002032!2.48e-40!165;CL:0000837!2.48e-40!165;CL:0000988!5.02e-40!182;CL:0002393!5.29e-24!9;CL:0002397!5.29e-24!9;CL:0000134!1.69e-16!358;CL:0002320!4.98e-16!365;CL:0000767!4.98e-15!3;CL:0000219!2.28e-14!390;CL:0000048!2.22e-12!430;CL:0000723!4.26e-12!436;CL:0000034!9.89e-12!444;CL:0000063!4.47e-07!578;CL:0000842!8.25e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.23e-82;33!CL:0002057;3.23e-82;33!CL:0000473;1.67e-57;39!CL:0000234;1.67e-57;39!CL:0000576;1.22e-49;48!CL:0000766;1.03e-27;69!CL:0000763;1.98e-13;100!CL:0000767;2.12e-12;3!CL:0002087;7.63e-11;104!CL:0000738;2.52e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.12e-88,42;CL:0002057,8.12e-88,42;CL:0000473,1.78e-76,48;CL:0000234,1.78e-76,48;CL:0002194,1.36e-60,59;CL:0000576,1.36e-60,59;CL:0000040,1.36e-60,59;CL:0000559,1.36e-60,59;CL:0000766,1.45e-59,72;CL:0002009,1.53e-58,61;CL:0000839,5.96e-54,66;CL:0000557,4.10e-53,67;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0000738,2.76e-30,136;CL:0002087,7.31e-30,115;CL:0002031,1.69e-28,120;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000767,2.00e-12,3;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-66;42!CL:0000049;3.34e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.41e-73!80;UBERON:0001474!2.88e-67!86;UBERON:0002390!2.86e-62!102;UBERON:0003061!2.86e-62!102;UBERON:0004765!2.81e-56!101;UBERON:0001434!2.81e-56!101;UBERON:0002193!4.36e-56!112;UBERON:0002405!1.40e-48!115;UBERON:0002204!3.35e-31!167;UBERON:0003081!1.65e-25!216;UBERON:0002384!2.19e-15!375;UBERON:0000926!3.21e-08!448;UBERON:0004120!3.21e-08!448;UBERON:0006603!3.21e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-46,76;UBERON:0001474,5.74e-43,82;UBERON:0004765,6.39e-39,90;UBERON:0002405,1.40e-37,93;UBERON:0002390,1.58e-35,98;UBERON:0003061,1.58e-35,98;UBERON:0001434,9.22e-35,100;UBERON:0002193,5.56e-32,108;UBERON:0002204,1.25e-19,167;UBERON:0003081,1.38e-15,203;UBERON:0002384,5.20e-09,371;UBERON:0000926,7.43e-09,315;UBERON:0004120,7.43e-09,315;UBERON:0006603,7.43e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.96682138424452,0.767658796194425,2.01260960310899,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,2.55671940596253,2.46700732813095,5.26500830521676,7.76769459269806,8.45330331546032,16.3172738623124,2.41321976515633,1.93645405075148,5.41705946377367,0.752969358170419,1.91034305040492,6.29225756446237,2.75475503133812,1.60464513538047,0.639337125799041,1.64925650093358,3.39088217956774,0.852449501065388,0.580418477257168,0,0.622822248995575,4.27122730936464,2.60741459210101,9.77349801173025,0,1.84138817993782,0.949387162322653,0.633765858935825,0.637812899895131,1.04829322754188,0.112328631146495,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:64468560..64468570,+ | |||
}} |
Revision as of 13:56, 10 September 2013
Short description: | p@chr10:64468560..64468570, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:64468560..64468570, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.12e-88 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.12e-88 | 42 |
defensive cell | 1.78e-76 | 48 |
phagocyte | 1.78e-76 | 48 |
monopoietic cell | 1.36e-60 | 59 |
monocyte | 1.36e-60 | 59 |
monoblast | 1.36e-60 | 59 |
promonocyte | 1.36e-60 | 59 |
myeloid leukocyte | 1.45e-59 | 72 |
macrophage dendritic cell progenitor | 1.53e-58 | 61 |
myeloid lineage restricted progenitor cell | 5.96e-54 | 66 |
granulocyte monocyte progenitor cell | 4.10e-53 | 67 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
leukocyte | 2.76e-30 | 136 |
nongranular leukocyte | 7.31e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.69e-28 | 120 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
basophil | 2.00e-12 | 3 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-46 | 76 |
bone element | 5.74e-43 | 82 |
skeletal element | 6.39e-39 | 90 |
immune system | 1.40e-37 | 93 |
hematopoietic system | 1.58e-35 | 98 |
blood island | 1.58e-35 | 98 |
skeletal system | 9.22e-35 | 100 |
hemolymphoid system | 5.56e-32 | 108 |
musculoskeletal system | 1.25e-19 | 167 |
lateral plate mesoderm | 1.38e-15 | 203 |
connective tissue | 5.20e-09 | 371 |
mesoderm | 7.43e-09 | 315 |
mesoderm-derived structure | 7.43e-09 | 315 |
presumptive mesoderm | 7.43e-09 | 315 |
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