FFCP PHASE1:Hg19::chr11:107578623..107578640,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6588|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11089|TSSclassifier=S|UniProt=O00631|association_with_transcript=15bp_to_AB464701,CR450290_5end|coexpression_cluster_id=C31|description=CAGE_peak_3_at_SLN_5end|id=chr11:107578623..107578640,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004874;1.56e-19;1!UBERON:0008814;2.27e-10;2!UBERON:0010056;2.27e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001630!2.06e-18!2;UBERON:0005090!2.06e-18!2;UBERON:0000341!5.28e-18!2;UBERON:0001723!1.62e-12!3;UBERON:0001033!1.62e-12!3;UBERON:0010056!1.62e-12!3;UBERON:0002426!3.74e-10!1;UBERON:0003831!3.74e-10!1;UBERON:0003898!3.74e-10!1;UBERON:0004830!3.74e-10!1;UBERON:0001774!3.74e-10!1;UBERON:0003830!3.74e-10!1;UBERON:0005175!3.74e-10!1;UBERON:0003897!3.74e-10!1;UBERON:0001103!3.74e-10!1;UBERON:0010084!3.74e-10!1;UBERON:0000989!4.87e-10!1;UBERON:0008811!4.87e-10!1;UBERON:0006258!4.87e-10!1;UBERON:0005876!4.87e-10!1;UBERON:0004874!4.87e-10!1;UBERON:0005418!5.31e-10!1;UBERON:0001389!5.31e-10!1;UBERON:0000026!5.31e-10!1;UBERON:0008784!5.31e-10!1;UBERON:0006058!5.31e-10!1;UBERON:0003663!5.31e-10!1;UBERON:0001383!5.31e-10!1;UBERON:0004256!5.31e-10!1;UBERON:0002529!5.31e-10!1;UBERON:0004708!5.31e-10!1;UBERON:0002101!5.31e-10!1;UBERON:0004709!5.31e-10!1;UBERON:0003661!5.31e-10!1;UBERON:0002471!5.31e-10!1;UBERON:0004357!5.31e-10!1;UBERON:0009872!5.31e-10!1;UBERON:0004347!5.31e-10!1;UBERON:0005420!5.31e-10!1;UBERON:0005732!5.31e-10!1;UBERON:0006057!5.31e-10!1;UBERON:0000978!5.31e-10!1;UBERON:0002103!5.31e-10!1;UBERON:0001665!5.31e-10!1;UBERON:0003823!5.31e-10!1;UBERON:0000154!5.31e-10!1;UBERON:0005733!5.31e-10!1;UBERON:0005730!5.31e-10!1;UBERON:0007023!5.67e-10!115;UBERON:0007029!8.17e-10!1;UBERON:0001301!9.70e-10!1;UBERON:0002135!1.62e-09!1;UBERON:0003112!2.08e-09!1;UBERON:0000032!2.08e-09!1;UBERON:0005253!2.08e-09!1;UBERON:0003128!2.08e-09!1;UBERON:0002241!2.08e-09!1;UBERON:0001703!2.08e-09!1;UBERON:0004761!2.08e-09!1;UBERON:0009617!2.08e-09!1|ontology_enrichment_uberon_v019=UBERON:0005090;2.27e-37;2!UBERON:0001630;2.27e-37;2!UBERON:0000341;1.70e-36;2!UBERON:0001723;3.82e-25;3!UBERON:0001033;3.82e-25;3!UBERON:0002426;8.95e-20;1!UBERON:0003831;8.95e-20;1!UBERON:0003898;8.95e-20;1!UBERON:0004830;8.95e-20;1!UBERON:0003830;8.95e-20;1!UBERON:0005175;8.95e-20;1!UBERON:0001774;8.95e-20;1!UBERON:0001103;8.95e-20;1!UBERON:0000989;1.56e-19;1!UBERON:0008811;1.56e-19;1!UBERON:0001389;1.88e-19;1!UBERON:0000026;1.88e-19;1!UBERON:0008784;1.88e-19;1!UBERON:0006058;1.88e-19;1!UBERON:0003663;1.88e-19;1!UBERON:0004256;1.88e-19;1!UBERON:0004708;1.88e-19;1!UBERON:0002101;1.88e-19;1!UBERON:0004709;1.88e-19;1!UBERON:0002529;1.88e-19;1!UBERON:0010538;1.88e-19;1!UBERON:0003661;1.88e-19;1!UBERON:0010890;1.88e-19;1!UBERON:0002471;1.88e-19;1!UBERON:0001383;1.88e-19;1!UBERON:0010758;1.88e-19;1!UBERON:0010707;1.88e-19;1!UBERON:0000978;1.88e-19;1!UBERON:0002103;1.88e-19;1!UBERON:0001665;1.88e-19;1!UBERON:0003823;1.88e-19;1!UBERON:0000154;1.88e-19;1!UBERON:0010709;1.88e-19;1!UBERON:0007029;4.69e-19;1!UBERON:0001134;1.45e-18;16!UBERON:0002036;1.45e-18;16!UBERON:0000974;6.90e-13;6!UBERON:0002385;4.52e-10;31!UBERON:0001015;4.52e-10;31!UBERON:0000383;4.52e-10;31!UBERON:0000922;5.88e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0005090,2.27e-37,2;UBERON:0001630,2.27e-37,2;UBERON:0000341,1.70e-36,2;UBERON:0001723,3.82e-25,3;UBERON:0001033,3.82e-25,3;UBERON:0010056,3.82e-25,3;UBERON:0002426,8.95e-20,1;UBERON:0003831,8.95e-20,1;UBERON:0003898,8.95e-20,1;UBERON:0004830,8.95e-20,1;UBERON:0003830,8.95e-20,1;UBERON:0005175,8.95e-20,1;UBERON:0001774,8.95e-20,1;UBERON:0001103,8.95e-20,1;UBERON:0010084,8.95e-20,1;UBERON:0000989,1.56e-19,1;UBERON:0008811,1.56e-19,1;UBERON:0006258,1.56e-19,1;UBERON:0005876,1.56e-19,1;UBERON:0004874,1.56e-19,1;UBERON:0005418,1.88e-19,1;UBERON:0001389,1.88e-19,1;UBERON:0000026,1.88e-19,1;UBERON:0008784,1.88e-19,1;UBERON:0006058,1.88e-19,1;UBERON:0003663,1.88e-19,1;UBERON:0004256,1.88e-19,1;UBERON:0004708,1.88e-19,1;UBERON:0002101,1.88e-19,1;UBERON:0004709,1.88e-19,1;UBERON:0002529,1.88e-19,1;UBERON:0010538,1.88e-19,1;UBERON:0003661,1.88e-19,1;UBERON:0010890,1.88e-19,1;UBERON:0002471,1.88e-19,1;UBERON:0001383,1.88e-19,1;UBERON:0004357,1.88e-19,1;UBERON:0004347,1.88e-19,1;UBERON:0005420,1.88e-19,1;UBERON:0005732,1.88e-19,1;UBERON:0010758,1.88e-19,1;UBERON:0010707,1.88e-19,1;UBERON:0000978,1.88e-19,1;UBERON:0002103,1.88e-19,1;UBERON:0001665,1.88e-19,1;UBERON:0003823,1.88e-19,1;UBERON:0000154,1.88e-19,1;UBERON:0010709,1.88e-19,1;UBERON:0005733,1.88e-19,1;UBERON:0005730,1.88e-19,1;UBERON:0007029,4.69e-19,1;UBERON:0008814,1.21e-09,18;UBERON:0001042,3.14e-08,10;UBERON:0009145,3.14e-08,10;UBERON:0000974,4.19e-08,10;UBERON:0006562,1.46e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6588 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11089 | |||
|TSSclassifier=S | |||
|UniProt=O00631 | |||
|association_with_transcript=15bp_to_AB464701,CR450290_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_3_at_SLN_5end | |||
|id=chr11:107578623..107578640,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.56e-19;1!UBERON:0008814;2.27e-10;2!UBERON:0010056;2.27e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!2.06e-18!2;UBERON:0005090!2.06e-18!2;UBERON:0000341!5.28e-18!2;UBERON:0001723!1.62e-12!3;UBERON:0001033!1.62e-12!3;UBERON:0010056!1.62e-12!3;UBERON:0002426!3.74e-10!1;UBERON:0003831!3.74e-10!1;UBERON:0003898!3.74e-10!1;UBERON:0004830!3.74e-10!1;UBERON:0001774!3.74e-10!1;UBERON:0003830!3.74e-10!1;UBERON:0005175!3.74e-10!1;UBERON:0003897!3.74e-10!1;UBERON:0001103!3.74e-10!1;UBERON:0010084!3.74e-10!1;UBERON:0000989!4.87e-10!1;UBERON:0008811!4.87e-10!1;UBERON:0006258!4.87e-10!1;UBERON:0005876!4.87e-10!1;UBERON:0004874!4.87e-10!1;UBERON:0005418!5.31e-10!1;UBERON:0001389!5.31e-10!1;UBERON:0000026!5.31e-10!1;UBERON:0008784!5.31e-10!1;UBERON:0006058!5.31e-10!1;UBERON:0003663!5.31e-10!1;UBERON:0001383!5.31e-10!1;UBERON:0004256!5.31e-10!1;UBERON:0002529!5.31e-10!1;UBERON:0004708!5.31e-10!1;UBERON:0002101!5.31e-10!1;UBERON:0004709!5.31e-10!1;UBERON:0003661!5.31e-10!1;UBERON:0002471!5.31e-10!1;UBERON:0004357!5.31e-10!1;UBERON:0009872!5.31e-10!1;UBERON:0004347!5.31e-10!1;UBERON:0005420!5.31e-10!1;UBERON:0005732!5.31e-10!1;UBERON:0006057!5.31e-10!1;UBERON:0000978!5.31e-10!1;UBERON:0002103!5.31e-10!1;UBERON:0001665!5.31e-10!1;UBERON:0003823!5.31e-10!1;UBERON:0000154!5.31e-10!1;UBERON:0005733!5.31e-10!1;UBERON:0005730!5.31e-10!1;UBERON:0007023!5.67e-10!115;UBERON:0007029!8.17e-10!1;UBERON:0001301!9.70e-10!1;UBERON:0002135!1.62e-09!1;UBERON:0003112!2.08e-09!1;UBERON:0000032!2.08e-09!1;UBERON:0005253!2.08e-09!1;UBERON:0003128!2.08e-09!1;UBERON:0002241!2.08e-09!1;UBERON:0001703!2.08e-09!1;UBERON:0004761!2.08e-09!1;UBERON:0009617!2.08e-09!1 | |||
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|short_description=p3@SLN | |||
}} |
Revision as of 15:32, 10 September 2013
Short description: | p3@SLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLN_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 15bp_to_AB464701, CR450290_5end |
EntrezGene: | SLN |
HGNC: | 11089 |
UniProt: | O00631 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.