FFCP PHASE1:Hg19::chr11:112034831..112034848,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3606|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5986|TSSclassifier=S|UniProt=Q14116,Q6WWJ7|association_with_transcript=0bp_to_ENST00000280357,NM_001243211,NM_001562,uc001pnb.1,uc009yym.1_5end|coexpression_cluster_id=C2095|description=CAGE_peak_2_at_IL18_5end|id=chr11:112034831..112034848,-|ontology_enrichment_celltype=CL:0000763!5.33e-30!112;CL:0000049!5.33e-30!112;CL:0000766!3.24e-24!76;CL:0000839!2.18e-22!70;CL:0000557!3.09e-22!71;CL:0002009!8.74e-20!65;CL:0002194!8.25e-19!63;CL:0000576!8.25e-19!63;CL:0000040!8.25e-19!63;CL:0000559!8.25e-19!63;CL:0000037!5.54e-14!172;CL:0000566!5.54e-14!172;CL:0000988!2.57e-13!182;CL:0002032!6.63e-13!165;CL:0000837!6.63e-13!165;CL:0000860!8.32e-13!45;CL:0002057!1.69e-11!42;CL:0000738!7.56e-10!140;CL:0000066!9.05e-10!254;CL:0002076!4.59e-09!43;CL:0000063!3.19e-07!578;CL:0002031!4.72e-07!124|ontology_enrichment_celltype_v019=CL:0000766;2.47e-11;69!CL:0000473;1.68e-10;39!CL:0000234;1.68e-10;39!CL:0000576;3.33e-09;48!CL:0000763;4.17e-09;100!CL:0000860;6.39e-09;33!CL:0002057;6.39e-09;33!CL:0002076;9.65e-09;42!CL:0000077;2.96e-07;19!CL:0000451;3.41e-07;10!CL:0002368;7.96e-07;13|ontology_enrichment_celltype_v019_2=CL:0000763,9.65e-32,108;CL:0000049,9.65e-32,108;CL:0000766,2.69e-25,72;CL:0000557,3.25e-23,67;CL:0000839,3.75e-23,66;CL:0002009,3.86e-20,61;CL:0002194,5.16e-19,59;CL:0000576,5.16e-19,59;CL:0000040,5.16e-19,59;CL:0000559,5.16e-19,59;CL:0000473,1.49e-15,48;CL:0000234,1.49e-15,48;CL:0000037,2.06e-15,168;CL:0000988,1.50e-14,177;CL:0002032,4.87e-14,161;CL:0000837,4.87e-14,161;CL:0000066,9.80e-13,253;CL:0000860,6.94e-12,42;CL:0002057,6.94e-12,42;CL:0002076,4.56e-11,42;CL:0000738,8.02e-11,136;CL:0002031,1.06e-07,120;CL:0000077,2.32e-07,19;CL:0000451,3.30e-07,10;CL:0000223,7.99e-07,58;CL:0000076,8.11e-07,63|ontology_enrichment_development_v019=CL:0002057;7.88e-09;42!CL:0000049;1.33e-08;108|ontology_enrichment_disease=DOID:305!3.66e-07!106|ontology_enrichment_disease_v019=DOID:1749;6.02e-07;14|ontology_enrichment_disease_v019_2=DOID:305,1.37e-08,106;DOID:1749,5.81e-07,14|ontology_enrichment_uberon=UBERON:0002371!1.10e-18!80;UBERON:0002390!3.65e-17!102;UBERON:0003061!3.65e-17!102;UBERON:0002193!3.98e-15!112;UBERON:0001474!5.67e-15!86;UBERON:0004765!1.03e-11!101;UBERON:0001434!1.03e-11!101;UBERON:0002405!3.37e-11!115;UBERON:0000062!8.09e-09!511;UBERON:0000065!7.35e-08!53;UBERON:0008947!1.67e-07!38;UBERON:0003258!1.67e-07!38;UBERON:0001737!2.49e-07!9;UBERON:0001004!3.25e-07!72|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-08;9!UBERON:0001557;1.96e-08;9!UBERON:0000065;1.49e-07;44|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.40e-19,76;UBERON:0002390,2.51e-18,98;UBERON:0003061,2.51e-18,98;UBERON:0002193,2.95e-16,108;UBERON:0001474,3.47e-16,82;UBERON:0002405,1.37e-15,93;UBERON:0004765,3.06e-15,90;UBERON:0001434,1.88e-11,100;UBERON:0008947,2.34e-09,38;UBERON:0003258,2.34e-09,38;UBERON:0000065,1.59e-08,54;UBERON:0001737,2.03e-08,9;UBERON:0001004,6.00e-08,74;UBERON:0000072,8.82e-07,47|phase1_expression=0.363356758541113,0,0.422863212287913,1.0007329835313,0,2.61701557230111,0,0,0,9.09215565055583,5.58240934377942,0.436882744260345,0.263766978228454,0.495065411840187,0.994192127183747,2.6893005858071,0,0,0,0.246242116153576,0,0,0.572471974262113,0.684372125364421,0.125542639594803,0,0,0,4.32700704533794,3.83829398097213,3.2511385896376,9.19421224478927,9.93979531968225,8.8740962440029,0,0,10.2760153767197,3.32397245119126,3.81034450193269,1.73608696572681,16.1219141452746,10.0407036465884,19.318167572564,1.59938062657521,3.77875943688809,1.94067248950253,2.32429036905685,6.57868620834921,6.81354015969228,0.863077176966451,3.07392847834921,1.6553756092201,16.5477926753577,8.39130088658974,14.8969135253776,3.01187743268168,4.36649840092553,1.57306439111559,11.6311879100943,10.269728866435,15.344091019177,0.329851300186716,1.39624560335142,0.426224750532694,14.2202526928006,7.94339314567596,9.9651559839292,0.75374599577023,0,2.6062661364614,10.2917915447673,18.0456041633907,15.8231193720442,4.43636101255078,4.03948169933583,3.14487968262564,3.93150209012733,3.45406853535464,7.07192581467153,3.13514018115373,3.18266683518544,2.92262646023414,1.75996244461323,0.546138611262131,0,1.28019066769952,0.400395987036012,1.14950487990897,1.98313461835459,0.954053754535364,0.569212969109448,0.587237189370939,0.764546456250458,22.4691258584344,20.7388168303168,7.90152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,1.05402583354441,0,0,0.473554504088034,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.661743720148475,1.10864698731282,0.351339142772504,1.11332214173056,7.65020105414339,8.52804218404188,3.24547393654683,6.26867054277362,4.91944453919801,5.72377498332821,5.71994910780128,8.17206502925043,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.267899184852239,0.44905874525234,0.563057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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5986 | |||
|TSSclassifier=S | |||
|UniProt=Q14116,Q6WWJ7 | |||
|association_with_transcript=0bp_to_ENST00000280357,NM_001243211,NM_001562,uc001pnb.1,uc009yym.1_5end | |||
|coexpression_cluster_id=C2095 | |||
|description=CAGE_peak_2_at_IL18_5end | |||
|id=chr11:112034831..112034848,- | |||
|ontology_enrichment_celltype=CL:0000763!5.33e-30!112;CL:0000049!5.33e-30!112;CL:0000766!3.24e-24!76;CL:0000839!2.18e-22!70;CL:0000557!3.09e-22!71;CL:0002009!8.74e-20!65;CL:0002194!8.25e-19!63;CL:0000576!8.25e-19!63;CL:0000040!8.25e-19!63;CL:0000559!8.25e-19!63;CL:0000037!5.54e-14!172;CL:0000566!5.54e-14!172;CL:0000988!2.57e-13!182;CL:0002032!6.63e-13!165;CL:0000837!6.63e-13!165;CL:0000860!8.32e-13!45;CL:0002057!1.69e-11!42;CL:0000738!7.56e-10!140;CL:0000066!9.05e-10!254;CL:0002076!4.59e-09!43;CL:0000063!3.19e-07!578;CL:0002031!4.72e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000766;2.47e-11;69!CL:0000473;1.68e-10;39!CL:0000234;1.68e-10;39!CL:0000576;3.33e-09;48!CL:0000763;4.17e-09;100!CL:0000860;6.39e-09;33!CL:0002057;6.39e-09;33!CL:0002076;9.65e-09;42!CL:0000077;2.96e-07;19!CL:0000451;3.41e-07;10!CL:0002368;7.96e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.65e-32,108;CL:0000049,9.65e-32,108;CL:0000766,2.69e-25,72;CL:0000557,3.25e-23,67;CL:0000839,3.75e-23,66;CL:0002009,3.86e-20,61;CL:0002194,5.16e-19,59;CL:0000576,5.16e-19,59;CL:0000040,5.16e-19,59;CL:0000559,5.16e-19,59;CL:0000473,1.49e-15,48;CL:0000234,1.49e-15,48;CL:0000037,2.06e-15,168;CL:0000988,1.50e-14,177;CL:0002032,4.87e-14,161;CL:0000837,4.87e-14,161;CL:0000066,9.80e-13,253;CL:0000860,6.94e-12,42;CL:0002057,6.94e-12,42;CL:0002076,4.56e-11,42;CL:0000738,8.02e-11,136;CL:0002031,1.06e-07,120;CL:0000077,2.32e-07,19;CL:0000451,3.30e-07,10;CL:0000223,7.99e-07,58;CL:0000076,8.11e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002057;7.88e-09;42!CL:0000049;1.33e-08;108 | |||
|ontology_enrichment_disease=DOID:305!3.66e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.02e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.37e-08,106;DOID:1749,5.81e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-18!80;UBERON:0002390!3.65e-17!102;UBERON:0003061!3.65e-17!102;UBERON:0002193!3.98e-15!112;UBERON:0001474!5.67e-15!86;UBERON:0004765!1.03e-11!101;UBERON:0001434!1.03e-11!101;UBERON:0002405!3.37e-11!115;UBERON:0000062!8.09e-09!511;UBERON:0000065!7.35e-08!53;UBERON:0008947!1.67e-07!38;UBERON:0003258!1.67e-07!38;UBERON:0001737!2.49e-07!9;UBERON:0001004!3.25e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-08;9!UBERON:0001557;1.96e-08;9!UBERON:0000065;1.49e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.40e-19,76;UBERON:0002390,2.51e-18,98;UBERON:0003061,2.51e-18,98;UBERON:0002193,2.95e-16,108;UBERON:0001474,3.47e-16,82;UBERON:0002405,1.37e-15,93;UBERON:0004765,3.06e-15,90;UBERON:0001434,1.88e-11,100;UBERON:0008947,2.34e-09,38;UBERON:0003258,2.34e-09,38;UBERON:0000065,1.59e-08,54;UBERON:0001737,2.03e-08,9;UBERON:0001004,6.00e-08,74;UBERON:0000072,8.82e-07,47 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,1.0007329835313,0,2.61701557230111,0,0,0,9.09215565055583,5.58240934377942,0.436882744260345,0.263766978228454,0.495065411840187,0.994192127183747,2.6893005858071,0,0,0,0.246242116153576,0,0,0.572471974262113,0.684372125364421,0.125542639594803,0,0,0,4.32700704533794,3.83829398097213,3.2511385896376,9.19421224478927,9.93979531968225,8.8740962440029,0,0,10.2760153767197,3.32397245119126,3.81034450193269,1.73608696572681,16.1219141452746,10.0407036465884,19.318167572564,1.59938062657521,3.77875943688809,1.94067248950253,2.32429036905685,6.57868620834921,6.81354015969228,0.863077176966451,3.07392847834921,1.6553756092201,16.5477926753577,8.39130088658974,14.8969135253776,3.01187743268168,4.36649840092553,1.57306439111559,11.6311879100943,10.269728866435,15.344091019177,0.329851300186716,1.39624560335142,0.426224750532694,14.2202526928006,7.94339314567596,9.9651559839292,0.75374599577023,0,2.6062661364614,10.2917915447673,18.0456041633907,15.8231193720442,4.43636101255078,4.03948169933583,3.14487968262564,3.93150209012733,3.45406853535464,7.07192581467153,3.13514018115373,3.18266683518544,2.92262646023414,1.75996244461323,0.546138611262131,0,1.28019066769952,0.400395987036012,1.14950487990897,1.98313461835459,0.954053754535364,0.569212969109448,0.587237189370939,0.764546456250458,22.4691258584344,20.7388168303168,7.90152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,1.05402583354441,0,0,0.473554504088034,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.661743720148475,1.10864698731282,0.351339142772504,1.11332214173056,7.65020105414339,8.52804218404188,3.24547393654683,6.26867054277362,4.91944453919801,5.72377498332821,5.71994910780128,8.17206502925043,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.267899184852239,0.44905874525234,0.563057402416611,1.53316637465883,0,0,2.63560834872127,7.75560528296651,8.28578699070815,0,0.12663051166458,0.132409180813219,0,1.77334191099179,0,0,0,0,0,0,1.96764655938411,0.576175924479999,0.234321431833797,0,0.570471821544449,0.298897361103602,0,0,0,0,0,0,0,0,2.73048408581408,0.718618141816238,0,0,0,0,0,0,0.567160915800105,1.25572744982203,0,0.211931901159562,0.900273288253207,0.206105058476878,0,0.558350568994769,0.168776332241266,0.0974370051611986,0,0,0.646584227275248,0,0.201504196455281,1.01736355386293,13.3349988682675,12.2735754265876,15.2006435556172,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,15.3798840051797,14.3296986566386,11.0865073746402,17.2058597462535,16.5588377510229,16.1344020995546,14.9662752057782,12.7543952331475,13.8508976500701,0,0,4.115740113314,0,0,0,1.18157981336281,0,7.13332943550059,0.171567810298526,8.12152112023829,5.62008766288098,8.64549162740025,8.24037161910913,0,0,1.44331342025273,1.27523445472584,0.821860859650752,0.144366447761074,0,0,0,0.858486162094873,14.0343693469816,15.4442814991897,12.3363864699644,10.3107217385455,6.2153387433578,5.10390350072591,9.85143749731331,0.581267877027924,0,93.6060152002293,37.0683907195682,25.7086863270557,27.0945512423888,31.560608356595,0.063497894292169,0.381988425558278,0,0,0.205654985406647,3.00343057843917,0,0.672786506072164,0,0.5867062865676,0,0,0,0,0,0.514414748524284,1.41849132023278,0.799266537048298,0.142977993658148,0,0,0,0.355391948742546,0,15.9762869841581,14.816068796205,18.9948683245908,14.5948536769429,7.5338563714819,10.5416969741516,0.958499421966331,1.14861935834114,0,0.144781306667579,0.821905290201534,1.07436577943937,0,2.36436912242313,0.431255149719035,1.28343036279748,0,0,0,0,0,2.99602809578873,2.99161459204025,2.07207756718018,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,1.12948698808508,1.17480694477644,0.686286847621712,1.6541442089831,3.23571301227925,1.60091336705167,0,0,0,0,0.153461973288062,0.280660094433074,0.896974044789907,0,0,2.96836132889982,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,2.29632954224082,10.0253235151642,0.920809889358963,1.95184561879831,0,1.96686622439136,2.25599806453706,1.69433741629712,0,7.30696123266303,4.53872004239366,0,0.170093705276516,0.863663664408557,0,2.43851793789468,3.01013864312912,3.56826782263054,0,1.79099803777743,2.19259876645935,2.61435451024901,2.82095137628028,31.8174206328715,4.55529752530024,3.19427136107939,0,0,16.653700601889,15.6014459048765,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,6.7766815298001,3.84380134730212,4.08360679982669,1.0115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,0.762520775695299,0.255897791311334,0,0,0,0.719489830333259,0.274537029736055,0.942499218765491,0,0,0,0,0,0,0.545999645631943,2.2624869112594,0,0,0,0,1.15755106853338,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,11.835319865238,6.70302275535787,2.17781969722645,2.16530741786592,12.9151611801369,6.73885902670502,4.87773168890343,6.43225520579487,2.02979043692868,6.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| |||
|short_description=p2@IL18 | |||
}} |
Revision as of 15:44, 10 September 2013
Short description: | p2@IL18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_IL18_5end |
Coexpression cluster: | C2095_Mast_Retinal_CD14_bile_lung_cervical_Gingival |
Association with transcript: | 0bp_to_ENST00000280357, NM_001243211, NM_001562, uc001pnb.1, uc009yym.1_5end |
EntrezGene: | IL18 |
HGNC: | 5986 |
UniProt: | Q14116Q6WWJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.65e-32 | 108 |
common myeloid progenitor | 9.65e-32 | 108 |
myeloid leukocyte | 2.69e-25 | 72 |
granulocyte monocyte progenitor cell | 3.25e-23 | 67 |
myeloid lineage restricted progenitor cell | 3.75e-23 | 66 |
macrophage dendritic cell progenitor | 3.86e-20 | 61 |
monopoietic cell | 5.16e-19 | 59 |
monocyte | 5.16e-19 | 59 |
monoblast | 5.16e-19 | 59 |
promonocyte | 5.16e-19 | 59 |
defensive cell | 1.49e-15 | 48 |
phagocyte | 1.49e-15 | 48 |
hematopoietic stem cell | 2.06e-15 | 168 |
hematopoietic cell | 1.50e-14 | 177 |
hematopoietic oligopotent progenitor cell | 4.87e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.87e-14 | 161 |
epithelial cell | 9.80e-13 | 253 |
classical monocyte | 6.94e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.94e-12 | 42 |
endo-epithelial cell | 4.56e-11 | 42 |
leukocyte | 8.02e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.06e-07 | 120 |
mesothelial cell | 2.32e-07 | 19 |
dendritic cell | 3.30e-07 | 10 |
endodermal cell | 7.99e-07 | 58 |
squamous epithelial cell | 8.11e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.40e-19 | 76 |
hematopoietic system | 2.51e-18 | 98 |
blood island | 2.51e-18 | 98 |
hemolymphoid system | 2.95e-16 | 108 |
bone element | 3.47e-16 | 82 |
immune system | 1.37e-15 | 93 |
skeletal element | 3.06e-15 | 90 |
skeletal system | 1.88e-11 | 100 |
respiratory primordium | 2.34e-09 | 38 |
endoderm of foregut | 2.34e-09 | 38 |
respiratory tract | 1.59e-08 | 54 |
larynx | 2.03e-08 | 9 |
respiratory system | 6.00e-08 | 74 |
segment of respiratory tract | 8.82e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.37e-08 | 106 |
squamous cell carcinoma | 5.81e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.