FFCP PHASE1:Hg19::chr11:35201826..35201855,+: Difference between revisions
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{{FFCP | 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,0,0.975726071789027,2.65038171378292,4.97315227368514,0.203909198930495,0.0657727735628491,0.354581522651905,1.33477682270483,3.21821680687107,0.157115589916002,0,2.73947616152849,1.72742072974897,6.6885236304187,1.57248397188644,0,0,0,1.60342272946051,18.6494547746733,12.2917303507644,2.76503864725637,8.60454717640555,7.21825204456449,8.52134047591577,5.08064460229115,1.3746412112643,10.5470171125869,13.3775451456841,0,0.588901401691458,33.039757670195,0,1.84793052341245,4.6392577253528,4.85710993059139,0,0.198950775161368,2.97300226943921,3.72722070728568,0,0,0.848915739187391,1.09279780251979,0,5.39326307858592,0,14.1342096322761,9.80253121079384,2.9585900930838,4.24817786719542,2.34959794949634,1.80482086326016,1.29923502702408,4.46384846514144,16.5860589706375,0.160482733378337,0,17.8904420527771,4.01350832824064,0,0.135982980381829,0,6.87734892670021,15.2517957448368,22.6466058029395,16.439809360704,0.630832124175395,0.109265571963696,0.126698501011437,1.22386595690378,0,1.92979289023174,0,1.06090177505535,0,0.829169439458779,1.96522692137601,6.61025343893041,1.66645102024618,2.0668451147522,1.05527014302958,1.6819779387092,1.84576759006678,2.82964064541507,15.2401723527873,4.44903291410865,2.22261774948139,2.15166616178029,3.32660356546013,2.52350132694021,2.24127426343202,0,3.14388207373054,0,2.44482888365733,5.69654649642034,1.99727032255654,7.04458277568592,3.52625341533556|short_description=p3@CD44}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1681 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-49bp_to_ENST00000525209_5end | |||
|coexpression_cluster_id=C620 | |||
|description=CAGE_peak_3_at_CD44_5end | |||
|id=chr11:35201826..35201855,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.07e-19!76;CL:0000557!3.49e-18!71;CL:0000839!1.75e-17!70;CL:0002057!3.13e-17!42;CL:0002009!9.60e-17!65;CL:0002194!1.28e-16!63;CL:0000576!1.28e-16!63;CL:0000040!1.28e-16!63;CL:0000559!1.28e-16!63;CL:0000860!7.63e-16!45;CL:0002371!5.74e-15!591;CL:0000048!7.24e-13!430;CL:0000723!9.25e-13!436;CL:0000144!1.22e-12!625;CL:0000034!5.55e-11!444;CL:0000548!2.35e-10!679;CL:0000004!2.35e-10!679;CL:0000255!2.35e-10!679;CL:0000003!2.90e-10!722;CL:0000012!6.64e-10!682;CL:0002320!9.97e-10!365;CL:0000055!1.01e-09!180;CL:0000134!1.42e-09!358;CL:0000219!8.78e-09!390;CL:0002031!1.23e-07!124;CL:0000738!2.08e-07!140;CL:0000763!2.44e-07!112;CL:0000049!2.44e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.90e-19;33!CL:0002057;6.90e-19;33!CL:0000473;3.28e-17;39!CL:0000234;3.28e-17;39!CL:0000576;1.83e-10;48!CL:0000766;9.08e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.04e-20,72;CL:0000557,1.39e-19,67;CL:0000473,5.22e-19,48;CL:0000234,5.22e-19,48;CL:0000839,1.35e-18,66;CL:0002009,5.11e-18,61;CL:0002194,6.42e-18,59;CL:0000576,6.42e-18,59;CL:0000040,6.42e-18,59;CL:0000559,6.42e-18,59;CL:0000860,2.65e-17,42;CL:0002057,2.65e-17,42;CL:0000048,1.17e-13,427;CL:0000723,1.51e-13,433;CL:0000034,1.11e-11,441;CL:0002320,1.87e-10,361;CL:0000134,2.69e-10,354;CL:0000219,1.96e-09,386;CL:0000763,6.11e-08,108;CL:0000049,6.11e-08,108;CL:0002031,1.08e-07,120;CL:0000738,2.27e-07,136;CL:0002087,8.50e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.66e-19!167;UBERON:0002371!8.61e-17!80;UBERON:0004765!4.51e-14!101;UBERON:0001434!4.51e-14!101;UBERON:0001474!7.13e-14!86;UBERON:0002390!1.53e-12!102;UBERON:0003061!1.53e-12!102;UBERON:0003102!1.95e-10!95;UBERON:0002193!4.98e-10!112;UBERON:0002384!6.32e-09!375;UBERON:0003081!2.94e-08!216;UBERON:0002199!1.95e-07!45;UBERON:0002416!1.95e-07!45;UBERON:0001637!9.15e-07!42;UBERON:0003509!9.15e-07!42;UBERON:0004572!9.15e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.20e-19,167;UBERON:0002371,6.57e-18,76;UBERON:0004765,5.64e-15,90;UBERON:0001434,1.23e-14,100;UBERON:0001474,1.24e-14,82;UBERON:0002390,6.60e-13,98;UBERON:0003061,6.60e-13,98;UBERON:0002405,3.94e-12,93;UBERON:0003102,5.62e-11,99;UBERON:0000926,9.45e-11,315;UBERON:0004120,9.45e-11,315;UBERON:0006603,9.45e-11,315;UBERON:0002193,3.27e-10,108;UBERON:0002384,9.94e-10,371;UBERON:0003081,1.04e-08,203;UBERON:0002199,1.26e-07,46;UBERON:0002416,1.26e-07,46 | |||
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| |||
|short_description=p3@CD44 | |||
}} |
Revision as of 17:37, 10 September 2013
Short description: | p3@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | -49bp_to_ENST00000525209_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.04e-20 | 72 |
granulocyte monocyte progenitor cell | 1.39e-19 | 67 |
defensive cell | 5.22e-19 | 48 |
phagocyte | 5.22e-19 | 48 |
myeloid lineage restricted progenitor cell | 1.35e-18 | 66 |
macrophage dendritic cell progenitor | 5.11e-18 | 61 |
monopoietic cell | 6.42e-18 | 59 |
monocyte | 6.42e-18 | 59 |
monoblast | 6.42e-18 | 59 |
promonocyte | 6.42e-18 | 59 |
classical monocyte | 2.65e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.65e-17 | 42 |
multi fate stem cell | 1.17e-13 | 427 |
somatic stem cell | 1.51e-13 | 433 |
stem cell | 1.11e-11 | 441 |
connective tissue cell | 1.87e-10 | 361 |
mesenchymal cell | 2.69e-10 | 354 |
motile cell | 1.96e-09 | 386 |
myeloid cell | 6.11e-08 | 108 |
common myeloid progenitor | 6.11e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 1.08e-07 | 120 |
leukocyte | 2.27e-07 | 136 |
nongranular leukocyte | 8.50e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.20e-19 | 167 |
bone marrow | 6.57e-18 | 76 |
skeletal element | 5.64e-15 | 90 |
skeletal system | 1.23e-14 | 100 |
bone element | 1.24e-14 | 82 |
hematopoietic system | 6.60e-13 | 98 |
blood island | 6.60e-13 | 98 |
immune system | 3.94e-12 | 93 |
surface structure | 5.62e-11 | 99 |
mesoderm | 9.45e-11 | 315 |
mesoderm-derived structure | 9.45e-11 | 315 |
presumptive mesoderm | 9.45e-11 | 315 |
hemolymphoid system | 3.27e-10 | 108 |
connective tissue | 9.94e-10 | 371 |
lateral plate mesoderm | 1.04e-08 | 203 |
integument | 1.26e-07 | 46 |
integumental system | 1.26e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.