FFCP PHASE1:Hg19::chr11:47190566..47190570,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:47190566..47190570,-|id=chr11:47190566..47190570,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000624;2.63e-09;6!CL:0000623;1.01e-08;3!CL:0000791;3.78e-08;18!CL:0000789;3.78e-08;18!CL:0002419;3.78e-08;18|ontology_enrichment_celltype_v019_2=CL:0000838,6.75e-10,52;CL:0000542,1.12e-09,53;CL:0000051,1.12e-09,53;CL:0000624,1.84e-09,6;CL:0000623,4.60e-09,3;CL:0000825,4.60e-09,3;CL:0000791,3.15e-08,18;CL:0000789,3.15e-08,18;CL:0002420,3.15e-08,18;CL:0002419,3.15e-08,18;CL:0000790,3.15e-08,18|ontology_enrichment_development_v019=CL:0000790;3.78e-08;18!UBERON:0005425;1.44e-07;1!UBERON:0001045;3.72e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;3.72e-07;1!DOID:10165;3.72e-07;1!DOID:1798;3.72e-07;1|ontology_enrichment_disease_v019_2=DOID:1799,4.08e-07,1;DOID:10165,4.08e-07,1;DOID:1798,4.08e-07,1|ontology_enrichment_uberon=UBERON:0007023!2.35e-07!115|ontology_enrichment_uberon_v019=UBERON:0000941;1.44e-07;1!UBERON:0001785;1.44e-07;1!UBERON:0002464;1.44e-07;1!UBERON:0004904;1.44e-07;1!UBERON:0001021;1.44e-07;1!UBERON:0002038;3.72e-07;1!UBERON:0001154;3.72e-07;1!UBERON:0001153;3.72e-07;1!UBERON:0002426;3.72e-07;1!UBERON:0003831;3.72e-07;1!UBERON:0003898;3.72e-07;1!UBERON:0004830;3.72e-07;1!UBERON:0009854;3.72e-07;1!UBERON:0009661;3.72e-07;1!UBERON:0002950;3.72e-07;1!UBERON:0003830;3.72e-07;1!UBERON:0005175;3.72e-07;1!UBERON:0001774;3.72e-07;1!UBERON:0001103;3.72e-07;1!UBERON:0001891;3.72e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.27e-07,1;UBERON:0001785,1.27e-07,1;UBERON:0002464,1.27e-07,1;UBERON:0004904,1.27e-07,1;UBERON:0001021,1.27e-07,1;UBERON:0003902,1.27e-07,1;UBERON:0005425,1.27e-07,1;UBERON:0002426,2.52e-07,1;UBERON:0003831,2.52e-07,1;UBERON:0003898,2.52e-07,1;UBERON:0004830,2.52e-07,1;UBERON:0003830,2.52e-07,1;UBERON:0005175,2.52e-07,1;UBERON:0001774,2.52e-07,1;UBERON:0001103,2.52e-07,1;UBERON:0010084,2.52e-07,1;UBERON:0001154,6.57e-07,1;UBERON:0001153,6.57e-07,1;UBERON:0001045,6.57e-07,1;UBERON:0002038,7.40e-07,1;UBERON:0009661,7.40e-07,1;UBERON:0002950,7.40e-07,1;UBERON:0001891,7.40e-07,1;UBERON:0009616,7.40e-07,1;UBERON:0010286,7.40e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0,0,1.15148819429164,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,1.40381113229099,0.868043482863407,0,0.32389366601898,0,0.290796477559129,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0,0,0,1.13477044938228,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0.954053754535364,2.27685187643779,2.93618594685469,1.91136614062614,0,0.560508562981536,0,1.37696839079683,1.57204305099666,1.64481199199607,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0.822189523018381,0,0,0,0,3.1360657141493,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,3.7441627409691,2.46201486600758,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0,0,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0.326923806226917,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.368502951935304,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0.176096868026452,0,0.288239906833923,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0.985153801009636,1.72502059887614,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,1.50999940573032,0.533637789017222,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.085226627416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65869,0,0.122241444182866,0.406896178315738,0,0,0.320568492303233|short_description=p@chr11:47190566..47190570,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:47190566..47190570,- | |||
|id=chr11:47190566..47190570,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.63e-09;6!CL:0000623;1.01e-08;3!CL:0000791;3.78e-08;18!CL:0000789;3.78e-08;18!CL:0002419;3.78e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.75e-10,52;CL:0000542,1.12e-09,53;CL:0000051,1.12e-09,53;CL:0000624,1.84e-09,6;CL:0000623,4.60e-09,3;CL:0000825,4.60e-09,3;CL:0000791,3.15e-08,18;CL:0000789,3.15e-08,18;CL:0002420,3.15e-08,18;CL:0002419,3.15e-08,18;CL:0000790,3.15e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;3.78e-08;18!UBERON:0005425;1.44e-07;1!UBERON:0001045;3.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.72e-07;1!DOID:10165;3.72e-07;1!DOID:1798;3.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.08e-07,1;DOID:10165,4.08e-07,1;DOID:1798,4.08e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.44e-07;1!UBERON:0001785;1.44e-07;1!UBERON:0002464;1.44e-07;1!UBERON:0004904;1.44e-07;1!UBERON:0001021;1.44e-07;1!UBERON:0002038;3.72e-07;1!UBERON:0001154;3.72e-07;1!UBERON:0001153;3.72e-07;1!UBERON:0002426;3.72e-07;1!UBERON:0003831;3.72e-07;1!UBERON:0003898;3.72e-07;1!UBERON:0004830;3.72e-07;1!UBERON:0009854;3.72e-07;1!UBERON:0009661;3.72e-07;1!UBERON:0002950;3.72e-07;1!UBERON:0003830;3.72e-07;1!UBERON:0005175;3.72e-07;1!UBERON:0001774;3.72e-07;1!UBERON:0001103;3.72e-07;1!UBERON:0001891;3.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.27e-07,1;UBERON:0001785,1.27e-07,1;UBERON:0002464,1.27e-07,1;UBERON:0004904,1.27e-07,1;UBERON:0001021,1.27e-07,1;UBERON:0003902,1.27e-07,1;UBERON:0005425,1.27e-07,1;UBERON:0002426,2.52e-07,1;UBERON:0003831,2.52e-07,1;UBERON:0003898,2.52e-07,1;UBERON:0004830,2.52e-07,1;UBERON:0003830,2.52e-07,1;UBERON:0005175,2.52e-07,1;UBERON:0001774,2.52e-07,1;UBERON:0001103,2.52e-07,1;UBERON:0010084,2.52e-07,1;UBERON:0001154,6.57e-07,1;UBERON:0001153,6.57e-07,1;UBERON:0001045,6.57e-07,1;UBERON:0002038,7.40e-07,1;UBERON:0009661,7.40e-07,1;UBERON:0002950,7.40e-07,1;UBERON:0001891,7.40e-07,1;UBERON:0009616,7.40e-07,1;UBERON:0010286,7.40e-07,1 | |||
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| |||
|short_description=p@chr11:47190566..47190570,- | |||
}} |
Revision as of 17:56, 10 September 2013
Short description: | p@chr11:47190566..47190570, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:47190566..47190570, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.75e-10 | 52 |
lymphocyte | 1.12e-09 | 53 |
common lymphoid progenitor | 1.12e-09 | 53 |
CD4-positive, alpha-beta T cell | 1.84e-09 | 6 |
natural killer cell | 4.60e-09 | 3 |
pro-NK cell | 4.60e-09 | 3 |
mature alpha-beta T cell | 3.15e-08 | 18 |
alpha-beta T cell | 3.15e-08 | 18 |
immature T cell | 3.15e-08 | 18 |
mature T cell | 3.15e-08 | 18 |
immature alpha-beta T cell | 3.15e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.27e-07 | 1 |
cranial nerve | 1.27e-07 | 1 |
nerve trunk | 1.27e-07 | 1 |
nerve connecting eye with brain | 1.27e-07 | 1 |
nerve | 1.27e-07 | 1 |
retinal neural layer | 1.27e-07 | 1 |
presumptive neural retina | 1.27e-07 | 1 |
chest muscle | 2.52e-07 | 1 |
respiratory system muscle | 2.52e-07 | 1 |
skeletal muscle of trunk | 2.52e-07 | 1 |
respiratory system skeletal muscle | 2.52e-07 | 1 |
thoracic segment muscle | 2.52e-07 | 1 |
chest organ | 2.52e-07 | 1 |
muscle of trunk | 2.52e-07 | 1 |
diaphragm | 2.52e-07 | 1 |
future diaphragm | 2.52e-07 | 1 |
vermiform appendix | 6.57e-07 | 1 |
caecum | 6.57e-07 | 1 |
midgut | 6.57e-07 | 1 |
substantia nigra | 7.40e-07 | 1 |
midbrain nucleus | 7.40e-07 | 1 |
regional part of midbrain | 7.40e-07 | 1 |
midbrain | 7.40e-07 | 1 |
presumptive midbrain | 7.40e-07 | 1 |
midbrain neural tube | 7.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.08e-07 | 1 |
endocrine pancreas cancer | 4.08e-07 | 1 |
pancreatic endocrine carcinoma | 4.08e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.