FFCP PHASE1:Hg19::chr11:60145967..60145978,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=58475|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13378|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000534016_5end|coexpression_cluster_id=C883|description=CAGE_peak_3_at_MS4A7_5end|id=chr11:60145967..60145978,+|ontology_enrichment_celltype=CL:0002009!6.03e-51!65;CL:0002194!1.84e-49!63;CL:0000576!1.84e-49!63;CL:0000040!1.84e-49!63;CL:0000559!1.84e-49!63;CL:0000557!5.65e-49!71;CL:0002087!1.15e-44!119;CL:0000839!1.35e-44!70;CL:0000766!1.41e-44!76;CL:0002057!2.20e-43!42;CL:0000738!2.95e-42!140;CL:0002031!9.04e-41!124;CL:0000037!1.65e-39!172;CL:0000566!1.65e-39!172;CL:0000860!3.61e-39!45;CL:0002032!3.85e-37!165;CL:0000837!3.85e-37!165;CL:0000763!3.01e-36!112;CL:0000049!3.01e-36!112;CL:0000988!3.30e-35!182;CL:0002393!7.58e-11!9;CL:0002397!7.58e-11!9;CL:0000945!1.40e-07!24;CL:0000826!1.40e-07!24|ontology_enrichment_celltype_v019=CL:0000576;7.24e-49;48!CL:0000860;1.05e-48;33!CL:0002057;1.05e-48;33!CL:0000473;1.74e-48;39!CL:0000234;1.74e-48;39!CL:0000766;8.54e-34;69!CL:0002087;4.99e-17;104!CL:0000763;8.26e-17;100!CL:0000738;1.53e-12;136!CL:0002393;2.88e-11;6!CL:0002397;2.88e-11;6!CL:0000235;1.11e-10;6!CL:0000988;2.61e-09;177!CL:0000875;6.29e-07;3!CL:0002396;6.29e-07;3|ontology_enrichment_celltype_v019_2=CL:0002194,4.00e-83,59;CL:0000576,4.00e-83,59;CL:0000040,4.00e-83,59;CL:0000559,4.00e-83,59;CL:0002009,5.51e-83,61;CL:0000473,6.59e-79,48;CL:0000234,6.59e-79,48;CL:0000557,1.25e-76,67;CL:0000766,3.87e-73,72;CL:0000839,2.23e-72,66;CL:0000860,3.15e-69,42;CL:0002057,3.15e-69,42;CL:0002087,3.99e-58,115;CL:0000738,2.57e-54,136;CL:0002031,4.45e-51,120;CL:0000763,5.42e-51,108;CL:0000049,5.42e-51,108;CL:0000037,5.98e-45,168;CL:0002032,4.47e-42,161;CL:0000837,4.47e-42,161;CL:0000988,1.91e-41,177;CL:0002393,1.60e-16,9;CL:0002397,1.60e-16,9;CL:0000235,1.13e-10,6;CL:0000134,1.25e-09,354;CL:0002320,4.60e-09,361;CL:0000219,4.02e-07,386;CL:0000875,6.31e-07,3;CL:0002396,6.31e-07,3|ontology_enrichment_development_v019=CL:0002057;2.78e-49;42!CL:0000049;2.48e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.71e-50!102;UBERON:0003061!1.71e-50!102;UBERON:0002193!7.77e-46!112;UBERON:0002371!2.99e-43!80;UBERON:0001474!2.36e-38!86;UBERON:0007023!2.66e-38!115;UBERON:0002405!9.59e-33!115;UBERON:0004765!1.19e-29!101;UBERON:0001434!1.19e-29!101;UBERON:0003081!1.25e-16!216;UBERON:0002204!9.18e-12!167;UBERON:0001049!1.57e-11!57;UBERON:0005068!1.57e-11!57;UBERON:0006241!1.57e-11!57;UBERON:0007135!1.57e-11!57;UBERON:0002616!2.07e-08!59;UBERON:0000479!2.50e-08!787;UBERON:0003080!3.11e-08!42;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0000062!5.42e-07!511|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-08;15!UBERON:0000179;2.20e-08;15!UBERON:0000463;2.20e-08;15!UBERON:0002390;7.94e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.84e-75,98;UBERON:0003061,3.84e-75,98;UBERON:0002193,4.97e-70,108;UBERON:0002371,1.29e-67,76;UBERON:0002405,1.14e-61,93;UBERON:0001474,2.92e-61,82;UBERON:0004765,4.16e-54,90;UBERON:0001434,8.86e-47,100;UBERON:0003081,6.09e-31,203;UBERON:0002204,1.74e-21,167;UBERON:0000926,1.74e-14,315;UBERON:0004120,1.74e-14,315;UBERON:0006603,1.74e-14,315;UBERON:0007023,3.47e-09,114;UBERON:0002384,8.96e-09,371;UBERON:0000178,2.04e-08,15;UBERON:0000179,2.04e-08,15;UBERON:0000463,2.04e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.0787107813136792,22.0283995035386,13.4340289334024,14.8623478383433,0,0,0,0.232401601740905,0.284338464974843,0.293600439334847,15.5118714388926,30.4827560154615,15.8417935622572,36.0503913526278,18.1380452970629,32.4545215219075,33.8777896356386,9.82477453590904,23.773237996406,67.8692787764599,13.5685403047203,27.8735733805593,31.6461631554366,7.68482119587302,22.4658118394156,64.8121879784843,14.2006630388442,24.3767675869815,51.7666433742163,9.27880910196676,31.4612878223118,78.0513925545802,12.8371610830437,40.9175760511386,22.4298884126967,7.57961898962201,15.7703157697097,92.5767471225183,25.5323351111013,44.2203796786858,23.1148772036204,5.21482918420201,20.1985625575758,90.2045258923719,12.8897172595648,56.3303049644774,42.8848231213242,56.1275351907715,44.2379742022673,14.0410788933119,22.0760032477014,21.2157774440146,85.2188103786333,100.055088631142,99.5519638017255,7.03984977845291,3.27683166757279,0.889509253863555,2.13365111283254,2.40237592221607,2.29900975981793,1.32208974556972,0.954053754535364,0,1.17447437874188,0.382273228125229,0,2.24203425192614,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,1.50575119077773,0.255973222308837,1.24930726552346,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.0478326039817,0,0,0.649094787309367,1.0447784237956,1.59549552622638,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=58475 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13378 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000534016_5end | |||
|coexpression_cluster_id=C883 | |||
|description=CAGE_peak_3_at_MS4A7_5end | |||
|id=chr11:60145967..60145978,+ | |||
|ontology_enrichment_celltype=CL:0002009!6.03e-51!65;CL:0002194!1.84e-49!63;CL:0000576!1.84e-49!63;CL:0000040!1.84e-49!63;CL:0000559!1.84e-49!63;CL:0000557!5.65e-49!71;CL:0002087!1.15e-44!119;CL:0000839!1.35e-44!70;CL:0000766!1.41e-44!76;CL:0002057!2.20e-43!42;CL:0000738!2.95e-42!140;CL:0002031!9.04e-41!124;CL:0000037!1.65e-39!172;CL:0000566!1.65e-39!172;CL:0000860!3.61e-39!45;CL:0002032!3.85e-37!165;CL:0000837!3.85e-37!165;CL:0000763!3.01e-36!112;CL:0000049!3.01e-36!112;CL:0000988!3.30e-35!182;CL:0002393!7.58e-11!9;CL:0002397!7.58e-11!9;CL:0000945!1.40e-07!24;CL:0000826!1.40e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.24e-49;48!CL:0000860;1.05e-48;33!CL:0002057;1.05e-48;33!CL:0000473;1.74e-48;39!CL:0000234;1.74e-48;39!CL:0000766;8.54e-34;69!CL:0002087;4.99e-17;104!CL:0000763;8.26e-17;100!CL:0000738;1.53e-12;136!CL:0002393;2.88e-11;6!CL:0002397;2.88e-11;6!CL:0000235;1.11e-10;6!CL:0000988;2.61e-09;177!CL:0000875;6.29e-07;3!CL:0002396;6.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.00e-83,59;CL:0000576,4.00e-83,59;CL:0000040,4.00e-83,59;CL:0000559,4.00e-83,59;CL:0002009,5.51e-83,61;CL:0000473,6.59e-79,48;CL:0000234,6.59e-79,48;CL:0000557,1.25e-76,67;CL:0000766,3.87e-73,72;CL:0000839,2.23e-72,66;CL:0000860,3.15e-69,42;CL:0002057,3.15e-69,42;CL:0002087,3.99e-58,115;CL:0000738,2.57e-54,136;CL:0002031,4.45e-51,120;CL:0000763,5.42e-51,108;CL:0000049,5.42e-51,108;CL:0000037,5.98e-45,168;CL:0002032,4.47e-42,161;CL:0000837,4.47e-42,161;CL:0000988,1.91e-41,177;CL:0002393,1.60e-16,9;CL:0002397,1.60e-16,9;CL:0000235,1.13e-10,6;CL:0000134,1.25e-09,354;CL:0002320,4.60e-09,361;CL:0000219,4.02e-07,386;CL:0000875,6.31e-07,3;CL:0002396,6.31e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.78e-49;42!CL:0000049;2.48e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-50!102;UBERON:0003061!1.71e-50!102;UBERON:0002193!7.77e-46!112;UBERON:0002371!2.99e-43!80;UBERON:0001474!2.36e-38!86;UBERON:0007023!2.66e-38!115;UBERON:0002405!9.59e-33!115;UBERON:0004765!1.19e-29!101;UBERON:0001434!1.19e-29!101;UBERON:0003081!1.25e-16!216;UBERON:0002204!9.18e-12!167;UBERON:0001049!1.57e-11!57;UBERON:0005068!1.57e-11!57;UBERON:0006241!1.57e-11!57;UBERON:0007135!1.57e-11!57;UBERON:0002616!2.07e-08!59;UBERON:0000479!2.50e-08!787;UBERON:0003080!3.11e-08!42;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0000062!5.42e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-08;15!UBERON:0000179;2.20e-08;15!UBERON:0000463;2.20e-08;15!UBERON:0002390;7.94e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.84e-75,98;UBERON:0003061,3.84e-75,98;UBERON:0002193,4.97e-70,108;UBERON:0002371,1.29e-67,76;UBERON:0002405,1.14e-61,93;UBERON:0001474,2.92e-61,82;UBERON:0004765,4.16e-54,90;UBERON:0001434,8.86e-47,100;UBERON:0003081,6.09e-31,203;UBERON:0002204,1.74e-21,167;UBERON:0000926,1.74e-14,315;UBERON:0004120,1.74e-14,315;UBERON:0006603,1.74e-14,315;UBERON:0007023,3.47e-09,114;UBERON:0002384,8.96e-09,371;UBERON:0000178,2.04e-08,15;UBERON:0000179,2.04e-08,15;UBERON:0000463,2.04e-08,15 | |||
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| |||
|short_description=p3@MS4A7 | |||
}} |
Revision as of 18:18, 10 September 2013
Short description: | p3@MS4A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MS4A7_5end |
Coexpression cluster: | C883_CD14_CD14CD16_Monocytederived_spleen_Macrophage_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000534016_5end |
EntrezGene: | MS4A7 |
HGNC: | 13378 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.84e-75 | 98 |
blood island | 3.84e-75 | 98 |
hemolymphoid system | 4.97e-70 | 108 |
bone marrow | 1.29e-67 | 76 |
immune system | 1.14e-61 | 93 |
bone element | 2.92e-61 | 82 |
skeletal element | 4.16e-54 | 90 |
skeletal system | 8.86e-47 | 100 |
lateral plate mesoderm | 6.09e-31 | 203 |
musculoskeletal system | 1.74e-21 | 167 |
mesoderm | 1.74e-14 | 315 |
mesoderm-derived structure | 1.74e-14 | 315 |
presumptive mesoderm | 1.74e-14 | 315 |
adult organism | 3.47e-09 | 114 |
connective tissue | 8.96e-09 | 371 |
blood | 2.04e-08 | 15 |
haemolymphatic fluid | 2.04e-08 | 15 |
organism substance | 2.04e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.