FFCP PHASE1:Hg19::chr11:65149432..65149450,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283130|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27442|TSSclassifier=S|UniProt=E9PJ15,Q8N413|association_with_transcript=0bp_to_ENST00000526259,uc009yqi.1_5end|coexpression_cluster_id=C27|description=CAGE_peak_3_at_SLC25A45_5end|id=chr11:65149432..65149450,-|ontology_enrichment_celltype=CL:0000066!2.44e-17!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-10,253|ontology_enrichment_development_v019=UBERON:0008947;2.17e-13;29|ontology_enrichment_disease=DOID:305!9.65e-21!106;DOID:0050687!1.65e-15!143;DOID:162!7.12e-11!235;DOID:14566!4.27e-10!239;DOID:299!1.63e-08!25|ontology_enrichment_disease_v019=DOID:299;1.65e-08;25|ontology_enrichment_disease_v019_2=DOID:305,6.56e-19,106;DOID:0050687,2.45e-12,143;DOID:299,2.29e-08,25|ontology_enrichment_uberon=UBERON:0004921!4.05e-13!129;UBERON:0004185!4.05e-13!129;UBERON:0001041!1.04e-10!98;UBERON:0001007!2.63e-10!155;UBERON:0001555!2.63e-10!155;UBERON:0007026!2.63e-10!155;UBERON:0001737!5.02e-10!9;UBERON:0004119!6.44e-09!169;UBERON:0000925!6.44e-09!169;UBERON:0006595!6.44e-09!169;UBERON:0000077!1.01e-08!130;UBERON:0008947!1.96e-07!38;UBERON:0003258!1.96e-07!38;UBERON:0005177!5.71e-07!107|ontology_enrichment_uberon_v019=UBERON:0001737;3.49e-32;9!UBERON:0001557;3.49e-32;9!UBERON:0005409;1.21e-09;22!UBERON:0000072;4.55e-09;37!UBERON:0002423;1.08e-08;25!UBERON:0002108;4.88e-08;4!UBERON:0000160;1.77e-07;17!UBERON:0000065;3.16e-07;44!UBERON:0002107;5.65e-07;19!UBERON:0006925;5.65e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.42e-32,9;UBERON:0004921,7.80e-17,118;UBERON:0001557,1.51e-14,19;UBERON:0001007,1.16e-13,145;UBERON:0001555,1.16e-13,145;UBERON:0007026,1.16e-13,145;UBERON:0004119,7.09e-13,160;UBERON:0000925,7.09e-13,160;UBERON:0006595,7.09e-13,160;UBERON:0001041,1.54e-12,87;UBERON:0008947,1.01e-09,38;UBERON:0003258,1.01e-09,38;UBERON:0009497,1.01e-08,25;UBERON:0000015,1.01e-08,25;UBERON:0002423,1.01e-08,25;UBERON:0006235,1.01e-08,25;UBERON:0004161,1.01e-08,25;UBERON:0005409,2.29e-08,25;UBERON:0002108,4.89e-08,4;UBERON:0008835,7.16e-08,22;UBERON:0003894,7.16e-08,22;UBERON:0000160,1.74e-07,17;UBERON:0009854,1.75e-07,23;UBERON:0000072,1.91e-07,47;UBERON:0011216,3.27e-07,223;UBERON:0002107,4.72e-07,19;UBERON:0006925,4.72e-07,19;UBERON:0008836,4.72e-07,19;UBERON:0007499,8.37e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.687720651731561,0.492603536699674,0.629686250509434,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.785874452986276,0,0.370784442784429,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,1.25849830862972,0.275118041940067,0.835979866147242,0.516833518338658,0,0.33472061276467,1.20848795132744,1.52054421143703,0.24406205754817,0.735326160691737,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,1.53798840051797,1.34867752062481,2.16909926895134,1.8749975364507,1.52515610864684,2.60997681022206,1.75280700608214,2.15843611637881,3.07797725557112,0,0,0.4115740113314,0,5.07020139287323,3.9313088667105,1.77236972004421,0,2.33678033231916,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0.858486162094873,0,0.468008530278475,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0.606255142892519,0,0,0.248107807818777,0,0,0,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0.725156697549733,0,0,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0.316654886678627,2.27466768141793,0.680374821106063,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,1.68471475667626,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283130 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27442 | |||
|TSSclassifier=S | |||
|UniProt=E9PJ15,Q8N413 | |||
|association_with_transcript=0bp_to_ENST00000526259,uc009yqi.1_5end | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_3_at_SLC25A45_5end | |||
|id=chr11:65149432..65149450,- | |||
|ontology_enrichment_celltype=CL:0000066!2.44e-17!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.17e-13;29 | |||
|ontology_enrichment_disease=DOID:305!9.65e-21!106;DOID:0050687!1.65e-15!143;DOID:162!7.12e-11!235;DOID:14566!4.27e-10!239;DOID:299!1.63e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.65e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.56e-19,106;DOID:0050687,2.45e-12,143;DOID:299,2.29e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!4.05e-13!129;UBERON:0004185!4.05e-13!129;UBERON:0001041!1.04e-10!98;UBERON:0001007!2.63e-10!155;UBERON:0001555!2.63e-10!155;UBERON:0007026!2.63e-10!155;UBERON:0001737!5.02e-10!9;UBERON:0004119!6.44e-09!169;UBERON:0000925!6.44e-09!169;UBERON:0006595!6.44e-09!169;UBERON:0000077!1.01e-08!130;UBERON:0008947!1.96e-07!38;UBERON:0003258!1.96e-07!38;UBERON:0005177!5.71e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.49e-32;9!UBERON:0001557;3.49e-32;9!UBERON:0005409;1.21e-09;22!UBERON:0000072;4.55e-09;37!UBERON:0002423;1.08e-08;25!UBERON:0002108;4.88e-08;4!UBERON:0000160;1.77e-07;17!UBERON:0000065;3.16e-07;44!UBERON:0002107;5.65e-07;19!UBERON:0006925;5.65e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.42e-32,9;UBERON:0004921,7.80e-17,118;UBERON:0001557,1.51e-14,19;UBERON:0001007,1.16e-13,145;UBERON:0001555,1.16e-13,145;UBERON:0007026,1.16e-13,145;UBERON:0004119,7.09e-13,160;UBERON:0000925,7.09e-13,160;UBERON:0006595,7.09e-13,160;UBERON:0001041,1.54e-12,87;UBERON:0008947,1.01e-09,38;UBERON:0003258,1.01e-09,38;UBERON:0009497,1.01e-08,25;UBERON:0000015,1.01e-08,25;UBERON:0002423,1.01e-08,25;UBERON:0006235,1.01e-08,25;UBERON:0004161,1.01e-08,25;UBERON:0005409,2.29e-08,25;UBERON:0002108,4.89e-08,4;UBERON:0008835,7.16e-08,22;UBERON:0003894,7.16e-08,22;UBERON:0000160,1.74e-07,17;UBERON:0009854,1.75e-07,23;UBERON:0000072,1.91e-07,47;UBERON:0011216,3.27e-07,223;UBERON:0002107,4.72e-07,19;UBERON:0006925,4.72e-07,19;UBERON:0008836,4.72e-07,19;UBERON:0007499,8.37e-07,25 | |||
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| |||
|short_description=p3@SLC25A45 | |||
}} |
Revision as of 18:54, 10 September 2013
Short description: | p3@SLC25A45 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC25A45_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000526259, uc009yqi.1_5end |
EntrezGene: | SLC25A45 |
HGNC: | 27442 |
UniProt: | E9PJ15Q8N413 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.42e-32 | 9 |
subdivision of digestive tract | 7.80e-17 | 118 |
upper respiratory tract | 1.51e-14 | 19 |
digestive system | 1.16e-13 | 145 |
digestive tract | 1.16e-13 | 145 |
primitive gut | 1.16e-13 | 145 |
endoderm-derived structure | 7.09e-13 | 160 |
endoderm | 7.09e-13 | 160 |
presumptive endoderm | 7.09e-13 | 160 |
foregut | 1.54e-12 | 87 |
respiratory primordium | 1.01e-09 | 38 |
endoderm of foregut | 1.01e-09 | 38 |
epithelium of foregut-midgut junction | 1.01e-08 | 25 |
anatomical boundary | 1.01e-08 | 25 |
hepatobiliary system | 1.01e-08 | 25 |
foregut-midgut junction | 1.01e-08 | 25 |
septum transversum | 1.01e-08 | 25 |
gastrointestinal system | 2.29e-08 | 25 |
small intestine | 4.89e-08 | 4 |
hepatic diverticulum | 7.16e-08 | 22 |
liver primordium | 7.16e-08 | 22 |
intestine | 1.74e-07 | 17 |
digestive tract diverticulum | 1.75e-07 | 23 |
segment of respiratory tract | 1.91e-07 | 47 |
organ system subdivision | 3.27e-07 | 223 |
liver | 4.72e-07 | 19 |
digestive gland | 4.72e-07 | 19 |
liver bud | 4.72e-07 | 19 |
epithelial sac | 8.37e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.56e-19 | 106 |
cell type cancer | 2.45e-12 | 143 |
adenocarcinoma | 2.29e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.