FFCP PHASE1:Hg19::chr11:94528192..94528210,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:94528192..94528210,+|id=chr11:94528192..94528210,+|ontology_enrichment_celltype=CL:0000055!8.50e-20!180;CL:0000359!7.43e-16!32;CL:0000680!5.95e-13!57;CL:0000056!5.95e-13!57;CL:0000355!5.95e-13!57;CL:0000192!1.22e-12!42;CL:0000514!1.22e-12!42;CL:0000393!1.68e-11!60;CL:0000211!1.68e-11!60;CL:0000187!1.99e-11!54;CL:0000222!3.82e-11!119;CL:0000183!1.37e-10!59;CL:0000220!7.37e-10!246;CL:0000057!7.47e-10!75;CL:0002321!1.65e-09!248;CL:0002620!1.81e-07!23|ontology_enrichment_celltype_v019=CL:0000359;3.87e-23;32!CL:0000192;1.60e-13;43!CL:0000569;4.38e-10;4!CL:0000708;3.34e-09;3!CL:0002539;1.83e-08;10!CL:0000187;3.75e-08;55|ontology_enrichment_celltype_v019_2=CL:0000359,4.53e-24,32;CL:0000192,1.97e-18,43;CL:0000514,1.97e-18,43;CL:0000680,9.27e-17,58;CL:0000056,9.27e-17,58;CL:0000355,9.27e-17,58;CL:0000187,9.63e-15,55;CL:0000393,9.69e-13,61;CL:0000211,9.69e-13,61;CL:0000222,2.91e-12,121;CL:0000569,4.66e-10,4;CL:0000011,4.66e-10,4;CL:0000708,2.93e-09,3;CL:0002539,8.43e-09,10|ontology_enrichment_development_v019=CL:0000514;1.60e-13;43!CL:0000011;4.38e-10;4!CL:0000355;7.99e-08;58|ontology_enrichment_disease=DOID:2394!3.45e-08!14|ontology_enrichment_disease_v019=DOID:2394;3.59e-10;14|ontology_enrichment_disease_v019_2=DOID:2394,3.99e-10,14|ontology_enrichment_uberon=UBERON:0002049!1.50e-21!79;UBERON:0007798!1.50e-21!79;UBERON:0001637!7.59e-20!42;UBERON:0003509!7.59e-20!42;UBERON:0004572!7.59e-20!42;UBERON:0001981!2.39e-17!60;UBERON:0007500!2.39e-17!60;UBERON:0004537!2.39e-17!60;UBERON:0006965!2.39e-17!60;UBERON:0004535!2.85e-16!110;UBERON:0000055!4.38e-16!69;UBERON:0004872!1.69e-15!84;UBERON:0004573!1.75e-15!33;UBERON:0004571!1.75e-15!33;UBERON:0001009!4.03e-15!113;UBERON:0004290!1.55e-14!70;UBERON:0000914!6.04e-14!83;UBERON:0002329!6.04e-14!83;UBERON:0003077!6.04e-14!83;UBERON:0003059!6.04e-14!83;UBERON:0007282!6.04e-14!83;UBERON:0009618!6.04e-14!83;UBERON:0007285!6.04e-14!83;UBERON:0001134!9.61e-14!61;UBERON:0002036!9.61e-14!61;UBERON:0003082!9.61e-14!61;UBERON:0002385!2.04e-13!63;UBERON:0001015!2.04e-13!63;UBERON:0000383!2.04e-13!63;UBERON:0000486!1.67e-12!82;UBERON:0000490!2.45e-12!138;UBERON:0000947!9.85e-11!21;UBERON:0010191!9.85e-11!21;UBERON:0003914!7.28e-09!118;UBERON:0000119!3.34e-07!312;UBERON:0005256!5.84e-07!143|ontology_enrichment_uberon_v019=UBERON:0004573;3.99e-23;33!UBERON:0004571;3.99e-23;33!UBERON:0001637;3.32e-19;42!UBERON:0003509;3.32e-19;42!UBERON:0004572;3.32e-19;42!UBERON:0000947;3.73e-14;21!UBERON:0010191;3.73e-14;21!UBERON:0002049;1.11e-11;75!UBERON:0007798;1.11e-11;75!UBERON:0006876;3.81e-10;11!UBERON:0007500;3.00e-09;56!UBERON:0001981;3.00e-09;56!UBERON:0004537;3.00e-09;56!UBERON:0003210;3.34e-09;3!UBERON:0005284;1.50e-08;5!UBERON:0004237;1.83e-08;10!UBERON:0004695;1.83e-08;10!UBERON:0002111;1.83e-08;10!UBERON:0004178;1.83e-08;10!UBERON:0001009;6.25e-08;112!UBERON:0000055;1.60e-07;65!UBERON:0004535;5.71e-07;109!UBERON:0002385;7.00e-07;31!UBERON:0001015;7.00e-07;31!UBERON:0000383;7.00e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.71e-26,78;UBERON:0007798,5.71e-26,78;UBERON:0001637,1.18e-25,42;UBERON:0003509,1.18e-25,42;UBERON:0004572,1.18e-25,42;UBERON:0004573,2.51e-25,33;UBERON:0004571,2.51e-25,33;UBERON:0004535,1.21e-22,109;UBERON:0001009,9.33e-22,112;UBERON:0007500,1.06e-19,59;UBERON:0001981,1.06e-19,59;UBERON:0004537,1.06e-19,59;UBERON:0006965,1.06e-19,59;UBERON:0004872,1.15e-18,83;UBERON:0001134,2.41e-18,62;UBERON:0002036,2.41e-18,62;UBERON:0003082,2.41e-18,62;UBERON:0000055,6.89e-18,68;UBERON:0002385,1.48e-17,64;UBERON:0001015,1.48e-17,64;UBERON:0000383,1.48e-17,64;UBERON:0002329,1.13e-16,71;UBERON:0003059,1.13e-16,71;UBERON:0007282,1.13e-16,71;UBERON:0004290,1.13e-16,71;UBERON:0009618,1.13e-16,71;UBERON:0003077,2.41e-16,72;UBERON:0007285,2.41e-16,72;UBERON:0007524,5.05e-16,73;UBERON:0007503,1.52e-14,78;UBERON:0000947,2.66e-14,21;UBERON:0010191,2.66e-14,21;UBERON:0000486,2.97e-13,83;UBERON:0003914,6.13e-11,117;UBERON:0006876,3.19e-10,11;UBERON:0003210,2.93e-09,3;UBERON:0004237,8.43e-09,10;UBERON:0004695,8.43e-09,10;UBERON:0002111,8.43e-09,10;UBERON:0004178,8.43e-09,10;UBERON:0005284,1.74e-08,5;UBERON:0000490,1.79e-08,148;UBERON:0000926,8.51e-08,315;UBERON:0004120,8.51e-08,315;UBERON:0006603,8.51e-08,315;UBERON:0005256,5.75e-07,122|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,1.80808358407193,2.19093027116212,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3835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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:94528192..94528210,+ | |||
|id=chr11:94528192..94528210,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.50e-20!180;CL:0000359!7.43e-16!32;CL:0000680!5.95e-13!57;CL:0000056!5.95e-13!57;CL:0000355!5.95e-13!57;CL:0000192!1.22e-12!42;CL:0000514!1.22e-12!42;CL:0000393!1.68e-11!60;CL:0000211!1.68e-11!60;CL:0000187!1.99e-11!54;CL:0000222!3.82e-11!119;CL:0000183!1.37e-10!59;CL:0000220!7.37e-10!246;CL:0000057!7.47e-10!75;CL:0002321!1.65e-09!248;CL:0002620!1.81e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.87e-23;32!CL:0000192;1.60e-13;43!CL:0000569;4.38e-10;4!CL:0000708;3.34e-09;3!CL:0002539;1.83e-08;10!CL:0000187;3.75e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.53e-24,32;CL:0000192,1.97e-18,43;CL:0000514,1.97e-18,43;CL:0000680,9.27e-17,58;CL:0000056,9.27e-17,58;CL:0000355,9.27e-17,58;CL:0000187,9.63e-15,55;CL:0000393,9.69e-13,61;CL:0000211,9.69e-13,61;CL:0000222,2.91e-12,121;CL:0000569,4.66e-10,4;CL:0000011,4.66e-10,4;CL:0000708,2.93e-09,3;CL:0002539,8.43e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.60e-13;43!CL:0000011;4.38e-10;4!CL:0000355;7.99e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!3.45e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.59e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.99e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.50e-21!79;UBERON:0007798!1.50e-21!79;UBERON:0001637!7.59e-20!42;UBERON:0003509!7.59e-20!42;UBERON:0004572!7.59e-20!42;UBERON:0001981!2.39e-17!60;UBERON:0007500!2.39e-17!60;UBERON:0004537!2.39e-17!60;UBERON:0006965!2.39e-17!60;UBERON:0004535!2.85e-16!110;UBERON:0000055!4.38e-16!69;UBERON:0004872!1.69e-15!84;UBERON:0004573!1.75e-15!33;UBERON:0004571!1.75e-15!33;UBERON:0001009!4.03e-15!113;UBERON:0004290!1.55e-14!70;UBERON:0000914!6.04e-14!83;UBERON:0002329!6.04e-14!83;UBERON:0003077!6.04e-14!83;UBERON:0003059!6.04e-14!83;UBERON:0007282!6.04e-14!83;UBERON:0009618!6.04e-14!83;UBERON:0007285!6.04e-14!83;UBERON:0001134!9.61e-14!61;UBERON:0002036!9.61e-14!61;UBERON:0003082!9.61e-14!61;UBERON:0002385!2.04e-13!63;UBERON:0001015!2.04e-13!63;UBERON:0000383!2.04e-13!63;UBERON:0000486!1.67e-12!82;UBERON:0000490!2.45e-12!138;UBERON:0000947!9.85e-11!21;UBERON:0010191!9.85e-11!21;UBERON:0003914!7.28e-09!118;UBERON:0000119!3.34e-07!312;UBERON:0005256!5.84e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.99e-23;33!UBERON:0004571;3.99e-23;33!UBERON:0001637;3.32e-19;42!UBERON:0003509;3.32e-19;42!UBERON:0004572;3.32e-19;42!UBERON:0000947;3.73e-14;21!UBERON:0010191;3.73e-14;21!UBERON:0002049;1.11e-11;75!UBERON:0007798;1.11e-11;75!UBERON:0006876;3.81e-10;11!UBERON:0007500;3.00e-09;56!UBERON:0001981;3.00e-09;56!UBERON:0004537;3.00e-09;56!UBERON:0003210;3.34e-09;3!UBERON:0005284;1.50e-08;5!UBERON:0004237;1.83e-08;10!UBERON:0004695;1.83e-08;10!UBERON:0002111;1.83e-08;10!UBERON:0004178;1.83e-08;10!UBERON:0001009;6.25e-08;112!UBERON:0000055;1.60e-07;65!UBERON:0004535;5.71e-07;109!UBERON:0002385;7.00e-07;31!UBERON:0001015;7.00e-07;31!UBERON:0000383;7.00e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.71e-26,78;UBERON:0007798,5.71e-26,78;UBERON:0001637,1.18e-25,42;UBERON:0003509,1.18e-25,42;UBERON:0004572,1.18e-25,42;UBERON:0004573,2.51e-25,33;UBERON:0004571,2.51e-25,33;UBERON:0004535,1.21e-22,109;UBERON:0001009,9.33e-22,112;UBERON:0007500,1.06e-19,59;UBERON:0001981,1.06e-19,59;UBERON:0004537,1.06e-19,59;UBERON:0006965,1.06e-19,59;UBERON:0004872,1.15e-18,83;UBERON:0001134,2.41e-18,62;UBERON:0002036,2.41e-18,62;UBERON:0003082,2.41e-18,62;UBERON:0000055,6.89e-18,68;UBERON:0002385,1.48e-17,64;UBERON:0001015,1.48e-17,64;UBERON:0000383,1.48e-17,64;UBERON:0002329,1.13e-16,71;UBERON:0003059,1.13e-16,71;UBERON:0007282,1.13e-16,71;UBERON:0004290,1.13e-16,71;UBERON:0009618,1.13e-16,71;UBERON:0003077,2.41e-16,72;UBERON:0007285,2.41e-16,72;UBERON:0007524,5.05e-16,73;UBERON:0007503,1.52e-14,78;UBERON:0000947,2.66e-14,21;UBERON:0010191,2.66e-14,21;UBERON:0000486,2.97e-13,83;UBERON:0003914,6.13e-11,117;UBERON:0006876,3.19e-10,11;UBERON:0003210,2.93e-09,3;UBERON:0004237,8.43e-09,10;UBERON:0004695,8.43e-09,10;UBERON:0002111,8.43e-09,10;UBERON:0004178,8.43e-09,10;UBERON:0005284,1.74e-08,5;UBERON:0000490,1.79e-08,148;UBERON:0000926,8.51e-08,315;UBERON:0004120,8.51e-08,315;UBERON:0006603,8.51e-08,315;UBERON:0005256,5.75e-07,122 | |||
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| |||
|short_description=p@chr11:94528192..94528210,+ | |||
}} |
Revision as of 20:14, 10 September 2013
Short description: | p@chr11:94528192..94528210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:94528192..94528210, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.53e-24 | 32 |
smooth muscle cell | 1.97e-18 | 43 |
smooth muscle myoblast | 1.97e-18 | 43 |
muscle precursor cell | 9.27e-17 | 58 |
myoblast | 9.27e-17 | 58 |
multi-potent skeletal muscle stem cell | 9.27e-17 | 58 |
muscle cell | 9.63e-15 | 55 |
electrically responsive cell | 9.69e-13 | 61 |
electrically active cell | 9.69e-13 | 61 |
mesodermal cell | 2.91e-12 | 121 |
cardiac mesenchymal cell | 4.66e-10 | 4 |
migratory trunk neural crest cell | 4.66e-10 | 4 |
leptomeningeal cell | 2.93e-09 | 3 |
aortic smooth muscle cell | 8.43e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.99e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.