FFCP PHASE1:Hg19::chr12:54645913..54645928,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23468|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1555|TSSclassifier=N|UniProt=|association_with_transcript=380bp_to_ENST00000547872_5end|description=CAGE_peak_3_at_CBX5_5end|id=chr12:54645913..54645928,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!2.88e-10!235;DOID:14566!3.86e-10!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.21e-09!82;UBERON:0005743!7.38e-09!86;UBERON:0001049!3.87e-08!57;UBERON:0005068!3.87e-08!57;UBERON:0006241!3.87e-08!57;UBERON:0007135!3.87e-08!57;UBERON:0000073!7.00e-08!94;UBERON:0001016!7.00e-08!94;UBERON:0002346!2.21e-07!90;UBERON:0003075!5.64e-07!86;UBERON:0007284!5.64e-07!86;UBERON:0000955!5.83e-07!69;UBERON:0006238!5.83e-07!69;UBERON:0002616!6.95e-07!59|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.62e-09,81;UBERON:0001049,1.06e-08,56;UBERON:0005068,1.06e-08,56;UBERON:0006241,1.06e-08,56;UBERON:0007135,1.06e-08,56;UBERON:0003528,9.02e-08,34;UBERON:0002020,9.02e-08,34;UBERON:0000073,1.13e-07,53;UBERON:0002616,1.13e-07,53;UBERON:0001016,1.37e-07,89;UBERON:0002346,1.50e-07,86;UBERON:0003075,7.57e-07,82;UBERON:0007284,7.57e-07,82;UBERON:0002791,8.57e-07,32|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,0,0,0,0,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0.975865597581014,0.61560529038394,0.408001382488506,0.313454721478088,1.71741592278634,3.28498620174922,2.25976751270645,1.60468152070698,1.55991119954897,1.33808328233255,0,0,0,0,0,0,1.08454080812422,0.853015394924529,0.880801318004542,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,1.77901850772711,0,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,0.560508562981536,0.526768169550154,0.196709770113833,0.786021525498329,0.822405995998037,0.501559486172034,0.32592226663359,0.473447805734733,0,0.222820913770347,0.294605907474837,0,0,0.640456598628376,0.650296737799391,0.657751618414705,0.829050053357545,0,0.14828656316206,0.535081656179426,1.04535523804977,0.679856056185397,0,0,0.253019692019503,0,0.651083453856419,0.950452044448374,0,0,0,0,0,0,1.06976078313403,0.724122019413995,0,1.34140171940727,0.12786256184353,0.361439152384566,0.50133791063589,1.01392563272577,0,0.486634870302636,0.756278537312543,2.88248216701333,0.966182642624386,0.327447688744282,0,0,0,0.348259474598534,0.26591592103773,0.476981248610684,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0,0,1.6507082516404,0.626984899610432,0.516833518338658,0,0,0.402829317109147,0,0.976248230192678,0.367663080345869,0.81014194788176,0.714397826272638,0.44905874525234,1.0135033243499,0,0,0.183201743930407,0,0,0,0,0.759783069987479,0.132409180813219,0,2.12801029319014,0.560677600142307,0,0.49333509683432,0,0.404132016209064,1.14423332179421,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0.597794722207204,1.05691048779388,0.809364721840658,0.98315564691574,0.61246251376468,3.31652656741774,0.103325781175765,0,0.989067717114227,0,0,0.841680569770331,0.875829639103749,0,0.438977620880838,1.83892677479412,0,0.680593098960126,0.89694817844431,0.427114777637135,1.27159140695737,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0.460249493211497,0.161646056818812,0,0.604512589365842,0.339121184620975,0.386521706326594,0,0,0.853815942907168,1.06023814657188,1.97529702878181,2.69518743039963,1.51392510525377,1.09493207722749,0,0,0,0,0,1.77460200059766,1.18009283054671,1.68707720918437,0.882351781859152,0.871517776369625,0.474541238222193,0.808987848960987,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,4.41463099414651,0.983907508344908,0,0,0,0.703702806881416,0.555530670951178,0.325808305310325,0,1.44331342025273,0.34779121492523,0.117408694235822,0.288732895522148,0.462985512576611,1.14152491340759,0,1.71697232418975,0,0.234004265139238,0.445893486866185,0,0,0.283550194484773,0.53735113621709,0.290633938513962,0,0,0.176096868026452,0,0,0.12624243342638,0.126995788584338,0,0,0,0.616964956219941,0,0,0,0,0.4400297149257,0.129271715757778,0,0.845302752556,0,0,0.514414748524284,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.599837947092342,0,0,2.10833939483032,0.239624855491583,1.14861935834114,1.42636905040718,0.144781306667579,2.4657158706046,0.358121926479791,1.2329365839288,0,0.431255149719035,0.256686072559497,0.254094624222463,0,1.54657762555539,1.00509759200609,1.27587750330633,0,0,0,0.736148950314839,0,0,1.45579603071565,3.03329280955175,0,0.468565659970853,0,0,0,1.32845119707087,0.368738337083406,0.78195253021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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1555 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=380bp_to_ENST00000547872_5end | |||
|description=CAGE_peak_3_at_CBX5_5end | |||
|id=chr12:54645913..54645928,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.88e-10!235;DOID:14566!3.86e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.21e-09!82;UBERON:0005743!7.38e-09!86;UBERON:0001049!3.87e-08!57;UBERON:0005068!3.87e-08!57;UBERON:0006241!3.87e-08!57;UBERON:0007135!3.87e-08!57;UBERON:0000073!7.00e-08!94;UBERON:0001016!7.00e-08!94;UBERON:0002346!2.21e-07!90;UBERON:0003075!5.64e-07!86;UBERON:0007284!5.64e-07!86;UBERON:0000955!5.83e-07!69;UBERON:0006238!5.83e-07!69;UBERON:0002616!6.95e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.62e-09,81;UBERON:0001049,1.06e-08,56;UBERON:0005068,1.06e-08,56;UBERON:0006241,1.06e-08,56;UBERON:0007135,1.06e-08,56;UBERON:0003528,9.02e-08,34;UBERON:0002020,9.02e-08,34;UBERON:0000073,1.13e-07,53;UBERON:0002616,1.13e-07,53;UBERON:0001016,1.37e-07,89;UBERON:0002346,1.50e-07,86;UBERON:0003075,7.57e-07,82;UBERON:0007284,7.57e-07,82;UBERON:0002791,8.57e-07,32 | |||
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| |||
|short_description=p3@CBX5 | |||
}} |
Revision as of 23:21, 10 September 2013
Short description: | p3@CBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CBX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 380bp_to_ENST00000547872_5end |
EntrezGene: | CBX5 |
HGNC: | 1555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.62e-09 | 81 |
neural tube | 1.06e-08 | 56 |
neural rod | 1.06e-08 | 56 |
future spinal cord | 1.06e-08 | 56 |
neural keel | 1.06e-08 | 56 |
brain grey matter | 9.02e-08 | 34 |
gray matter | 9.02e-08 | 34 |
regional part of nervous system | 1.13e-07 | 53 |
regional part of brain | 1.13e-07 | 53 |
nervous system | 1.37e-07 | 89 |
neurectoderm | 1.50e-07 | 86 |
neural plate | 7.57e-07 | 82 |
presumptive neural plate | 7.57e-07 | 82 |
regional part of telencephalon | 8.57e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.