FFCP PHASE1:Hg19::chr12:69747757..69747771,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C501|description=CAGE_peak_at_chr12:69747757..69747771,+|id=chr12:69747757..69747771,+|ontology_enrichment_celltype=CL:0002009!1.60e-76!65;CL:0002194!1.92e-76!63;CL:0000576!1.92e-76!63;CL:0000040!1.92e-76!63;CL:0000559!1.92e-76!63;CL:0000766!6.54e-69!76;CL:0002057!8.64e-69!42;CL:0000557!9.21e-69!71;CL:0000839!2.72e-67!70;CL:0000860!2.44e-63!45;CL:0000763!9.46e-55!112;CL:0000049!9.46e-55!112;CL:0002087!1.09e-39!119;CL:0000738!3.47e-37!140;CL:0000037!1.11e-34!172;CL:0000566!1.11e-34!172;CL:0002031!3.71e-34!124;CL:0002032!9.55e-33!165;CL:0000837!9.55e-33!165;CL:0000988!9.06e-32!182;CL:0000134!2.73e-10!358;CL:0002393!2.85e-10!9;CL:0002397!2.85e-10!9;CL:0002320!9.14e-10!365;CL:0000219!6.02e-08!390;CL:0000235!4.58e-07!10|ontology_enrichment_celltype_v019=CL:0000860;4.55e-81;33!CL:0002057;4.55e-81;33!CL:0000473;3.41e-74;39!CL:0000234;3.41e-74;39!CL:0000576;7.88e-50;48!CL:0000766;8.93e-33;69!CL:0000763;8.02e-18;100!CL:0002393;2.04e-11;6!CL:0002397;2.04e-11;6!CL:0002087;1.75e-10;104!CL:0000738;4.38e-08;136!CL:0000235;4.49e-07;6|ontology_enrichment_celltype_v019_2=CL:0000473,6.74e-95,48;CL:0000234,6.74e-95,48;CL:0000860,4.25e-90,42;CL:0002057,4.25e-90,42;CL:0002194,2.30e-74,59;CL:0000576,2.30e-74,59;CL:0000040,2.30e-74,59;CL:0000559,2.30e-74,59;CL:0002009,1.03e-71,61;CL:0000839,8.83e-66,66;CL:0000557,1.07e-64,67;CL:0000766,1.85e-63,72;CL:0000763,5.09e-45,108;CL:0000049,5.09e-45,108;CL:0002087,1.09e-34,115;CL:0002031,6.21e-33,120;CL:0000738,4.31e-30,136;CL:0002032,1.36e-27,161;CL:0000837,1.36e-27,161;CL:0000037,4.14e-26,168;CL:0000988,2.26e-24,177;CL:0000134,3.81e-08,354;CL:0002320,7.83e-08,361;CL:0002393,1.48e-07,9;CL:0002397,1.48e-07,9;CL:0000235,5.04e-07,6;CL:0000219,9.75e-07,386|ontology_enrichment_development_v019=CL:0002057;4.97e-65;42!CL:0000049;8.84e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.94e-62!102;UBERON:0003061!1.94e-62!102;UBERON:0002371!2.75e-59!80;UBERON:0002193!2.95e-59!112;UBERON:0001474!4.58e-54!86;UBERON:0002405!1.72e-46!115;UBERON:0004765!1.56e-45!101;UBERON:0001434!1.56e-45!101;UBERON:0002204!2.17e-22!167;UBERON:0003081!2.42e-21!216;UBERON:0000926!3.52e-09!448;UBERON:0004120!3.52e-09!448;UBERON:0006603!3.52e-09!448;UBERON:0002384!4.68e-09!375;UBERON:0000178!1.63e-07!15;UBERON:0000179!1.63e-07!15;UBERON:0000463!1.63e-07!15|ontology_enrichment_uberon_v019=UBERON:0003127;4.65e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.18e-56,76;UBERON:0002390,9.01e-54,98;UBERON:0003061,9.01e-54,98;UBERON:0001474,1.35e-51,82;UBERON:0002193,4.50e-48,108;UBERON:0004765,2.26e-46,90;UBERON:0002405,1.22e-44,93;UBERON:0001434,5.26e-41,100;UBERON:0003081,2.48e-23,203;UBERON:0002204,1.56e-21,167;UBERON:0000926,4.92e-12,315;UBERON:0004120,4.92e-12,315;UBERON:0006603,4.92e-12,315;UBERON:0003127,4.87e-10,2;UBERON:0002384,2.08e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.08371286321253,0,0,0,0,0,0,0.553995408531877,2.60707781711184,2.60413044859022,0.671746422719773,0.971680998056939,0.257575567634187,1.45398238779565,0,1.4555043671269,1.39457422143411,2.05583944010913,1.23882548358041,3.74000110018796,2.30544635876191,1.18241114944293,1.03423704220986,3.87290810150296,2.70852973188684,2.63539275359647,0.818718450173537,0.898893937780338,2.44867113896722,0.962787081228281,1.91801137739712,2.96866170168044,2.39356389145958,2.98357325372886,2.32167390902867,1.70215567407342,2.4912889959823,4.01997864410789,4.69334626578181,1.52032191293582,1.81619850790011,0.368277635987565,0.949387162322653,1.05627643155971,1.06302149982522,0.419317291016752,2.02191536063691,1.65194582125657,2.4108838004562,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0.97364218096405,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,1.17002132569619,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,12.6500363689819,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C501 | |||
|description=CAGE_peak_at_chr12:69747757..69747771,+ | |||
|id=chr12:69747757..69747771,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.60e-76!65;CL:0002194!1.92e-76!63;CL:0000576!1.92e-76!63;CL:0000040!1.92e-76!63;CL:0000559!1.92e-76!63;CL:0000766!6.54e-69!76;CL:0002057!8.64e-69!42;CL:0000557!9.21e-69!71;CL:0000839!2.72e-67!70;CL:0000860!2.44e-63!45;CL:0000763!9.46e-55!112;CL:0000049!9.46e-55!112;CL:0002087!1.09e-39!119;CL:0000738!3.47e-37!140;CL:0000037!1.11e-34!172;CL:0000566!1.11e-34!172;CL:0002031!3.71e-34!124;CL:0002032!9.55e-33!165;CL:0000837!9.55e-33!165;CL:0000988!9.06e-32!182;CL:0000134!2.73e-10!358;CL:0002393!2.85e-10!9;CL:0002397!2.85e-10!9;CL:0002320!9.14e-10!365;CL:0000219!6.02e-08!390;CL:0000235!4.58e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.55e-81;33!CL:0002057;4.55e-81;33!CL:0000473;3.41e-74;39!CL:0000234;3.41e-74;39!CL:0000576;7.88e-50;48!CL:0000766;8.93e-33;69!CL:0000763;8.02e-18;100!CL:0002393;2.04e-11;6!CL:0002397;2.04e-11;6!CL:0002087;1.75e-10;104!CL:0000738;4.38e-08;136!CL:0000235;4.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.74e-95,48;CL:0000234,6.74e-95,48;CL:0000860,4.25e-90,42;CL:0002057,4.25e-90,42;CL:0002194,2.30e-74,59;CL:0000576,2.30e-74,59;CL:0000040,2.30e-74,59;CL:0000559,2.30e-74,59;CL:0002009,1.03e-71,61;CL:0000839,8.83e-66,66;CL:0000557,1.07e-64,67;CL:0000766,1.85e-63,72;CL:0000763,5.09e-45,108;CL:0000049,5.09e-45,108;CL:0002087,1.09e-34,115;CL:0002031,6.21e-33,120;CL:0000738,4.31e-30,136;CL:0002032,1.36e-27,161;CL:0000837,1.36e-27,161;CL:0000037,4.14e-26,168;CL:0000988,2.26e-24,177;CL:0000134,3.81e-08,354;CL:0002320,7.83e-08,361;CL:0002393,1.48e-07,9;CL:0002397,1.48e-07,9;CL:0000235,5.04e-07,6;CL:0000219,9.75e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.97e-65;42!CL:0000049;8.84e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.94e-62!102;UBERON:0003061!1.94e-62!102;UBERON:0002371!2.75e-59!80;UBERON:0002193!2.95e-59!112;UBERON:0001474!4.58e-54!86;UBERON:0002405!1.72e-46!115;UBERON:0004765!1.56e-45!101;UBERON:0001434!1.56e-45!101;UBERON:0002204!2.17e-22!167;UBERON:0003081!2.42e-21!216;UBERON:0000926!3.52e-09!448;UBERON:0004120!3.52e-09!448;UBERON:0006603!3.52e-09!448;UBERON:0002384!4.68e-09!375;UBERON:0000178!1.63e-07!15;UBERON:0000179!1.63e-07!15;UBERON:0000463!1.63e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;4.65e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.18e-56,76;UBERON:0002390,9.01e-54,98;UBERON:0003061,9.01e-54,98;UBERON:0001474,1.35e-51,82;UBERON:0002193,4.50e-48,108;UBERON:0004765,2.26e-46,90;UBERON:0002405,1.22e-44,93;UBERON:0001434,5.26e-41,100;UBERON:0003081,2.48e-23,203;UBERON:0002204,1.56e-21,167;UBERON:0000926,4.92e-12,315;UBERON:0004120,4.92e-12,315;UBERON:0006603,4.92e-12,315;UBERON:0003127,4.87e-10,2;UBERON:0002384,2.08e-07,371 | |||
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|short_description=p@chr12:69747757..69747771,+ | |||
}} |
Revision as of 00:12, 11 September 2013
Short description: | p@chr12:69747757..69747771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:69747757..69747771, + |
Coexpression cluster: | C501_CD14_trachea_throat_Basophils_acute_Peripheral_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.74e-95 | 48 |
phagocyte | 6.74e-95 | 48 |
classical monocyte | 4.25e-90 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.25e-90 | 42 |
monopoietic cell | 2.30e-74 | 59 |
monocyte | 2.30e-74 | 59 |
monoblast | 2.30e-74 | 59 |
promonocyte | 2.30e-74 | 59 |
macrophage dendritic cell progenitor | 1.03e-71 | 61 |
myeloid lineage restricted progenitor cell | 8.83e-66 | 66 |
granulocyte monocyte progenitor cell | 1.07e-64 | 67 |
myeloid leukocyte | 1.85e-63 | 72 |
myeloid cell | 5.09e-45 | 108 |
common myeloid progenitor | 5.09e-45 | 108 |
nongranular leukocyte | 1.09e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 6.21e-33 | 120 |
leukocyte | 4.31e-30 | 136 |
hematopoietic oligopotent progenitor cell | 1.36e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-27 | 161 |
hematopoietic stem cell | 4.14e-26 | 168 |
hematopoietic cell | 2.26e-24 | 177 |
mesenchymal cell | 3.81e-08 | 354 |
connective tissue cell | 7.83e-08 | 361 |
intermediate monocyte | 1.48e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.48e-07 | 9 |
macrophage | 5.04e-07 | 6 |
motile cell | 9.75e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.18e-56 | 76 |
hematopoietic system | 9.01e-54 | 98 |
blood island | 9.01e-54 | 98 |
bone element | 1.35e-51 | 82 |
hemolymphoid system | 4.50e-48 | 108 |
skeletal element | 2.26e-46 | 90 |
immune system | 1.22e-44 | 93 |
skeletal system | 5.26e-41 | 100 |
lateral plate mesoderm | 2.48e-23 | 203 |
musculoskeletal system | 1.56e-21 | 167 |
mesoderm | 4.92e-12 | 315 |
mesoderm-derived structure | 4.92e-12 | 315 |
presumptive mesoderm | 4.92e-12 | 315 |
open tracheal system trachea | 4.87e-10 | 2 |
connective tissue | 2.08e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.