FFCP PHASE1:Hg19::chr13:53029665..53029676,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1990|TSSclassifier=S|UniProt=Q8WWK9|association_with_transcript=63bp_to_ENST00000378037_5end|description=CAGE_peak_3_at_CKAP2_5end|id=chr13:53029665..53029676,+|ontology_enrichment_celltype=CL:0000037!2.20e-15!172;CL:0000566!2.20e-15!172;CL:0000988!7.84e-14!182;CL:0002032!1.12e-12!165;CL:0000837!1.12e-12!165;CL:0000763!4.44e-09!112;CL:0000049!4.44e-09!112;CL:0000738!2.54e-08!140;CL:0000012!5.39e-07!682|ontology_enrichment_celltype_v019=CL:0000784;6.24e-09;3!CL:0000623;2.50e-08;3!CL:0000226;2.17e-07;3!CL:0000842;2.17e-07;3|ontology_enrichment_celltype_v019_2=CL:0000037,6.52e-24,168;CL:0000988,5.29e-22,177;CL:0002032,3.70e-18,161;CL:0000837,3.70e-18,161;CL:0000738,4.62e-14,136;CL:0000134,1.09e-11,354;CL:0002320,3.66e-11,361;CL:0000763,1.46e-10,108;CL:0000049,1.46e-10,108;CL:0000219,6.82e-10,386;CL:0000034,4.48e-09,441;CL:0000784,5.40e-09,3;CL:0002087,9.34e-09,115;CL:0000623,1.44e-08,3;CL:0000825,1.44e-08,3;CL:0000838,3.38e-08,52;CL:0002031,3.56e-08,120;CL:0000048,4.09e-08,427;CL:0000542,5.70e-08,53;CL:0000051,5.70e-08,53;CL:0000723,8.58e-08,433;CL:0000226,1.55e-07,3;CL:0000842,1.55e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!7.57e-14!51;DOID:0060083!7.57e-14!51;DOID:162!1.36e-11!235;DOID:14566!1.58e-11!239;DOID:1240!1.85e-11!39;DOID:8692!1.03e-10!31;DOID:0050686!2.00e-07!137|ontology_enrichment_disease_v019=DOID:8692;2.37e-15;31!DOID:1240;4.81e-11;39!DOID:2531;5.79e-08;51!DOID:0060083;5.79e-08;51|ontology_enrichment_disease_v019_2=DOID:8692,3.85e-16,31;DOID:1240,2.96e-15,39;DOID:2531,1.49e-13,51;DOID:0060083,1.49e-13,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.06e-11,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0,0.0821005894499457,0,0.786728553697808,4.22212337906934,1.39334510984468,0,0.30120591877825,0,2.40148321798935,0.710846162437108,1.46800219667424,2.21598163412751,1.00272223735071,0.651032612147555,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0,0.709446689665756,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0.426224750532694,0,1.13477044938228,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.637812899895131,1.46761051855863,0.22465726229299,0.300353785683013,0.64290234678832,0.285012743741249,0.39783335439818,0.547992461293902,0,0.546138611262131,0,0,0,0,0,0.954053754535364,2.84606484554724,1.76171156811282,1.14681968437569,2.64342657158052,5.60508562981536,1.31692042387539,2.75393678159366,1.96505381374582,1.23360899399706,0,0,0.946895611469467,0,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0.296573126324121,0,0,0.226618685395132,1.53288197440768,0.68725489096526,1.51811815211702,0,0,0,0,0,0,0.236777252044017,0,7.66105624253983,5.34880391567015,4.19990771260117,0,0,0,4.3372698286148,0,0.144846518960824,2.3858578411533,0,0.661743720148475,0.443458794925128,0.263504357079378,0,0,0,0.324547393654683,0.174129737299267,0,5.48528435902286,2.85997455390064,6.68623502393217,0.596287222100115,0,0,0.56530794192401,0,0.275118041940067,0,0.516833518338658,0,0,0,0.760272105718513,0,0.367663080345869,0,0.535798369704479,0.44905874525234,0.563057402416611,0,0,0.366403487860815,1.31780417436063,0,0,0,0.25326102332916,0,0,1.06400514659507,0,0,0,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0.312160076830321,0,0,0.587172493218824,0.485618833104395,0.561803226808994,0.204154171254893,0.245668634623536,0,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0.45071417671979,0,0.538168907066586,0,0,1.50045548042201,0.618315175430633,0.257640540045629,0.558350568994769,1.18143432568886,1.07180705677318,0.252433774244115,0.184099797284599,0,1.06502877754984,1.30977727695932,0.169560592310488,0.193260853163297,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,0.219500570817251,0,0.100528972411631,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0.570762456703795,0,0,0,0,0.297262324577456,0,0.16798212819886,0.567100388969546,0.895585227028483,0.290633938513962,0,0.492663237895943,1.23267807618516,0.621984346622316,0.144119953416961,0.6312121671319,0.380987365753014,0.763976851116555,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.4400297149257,0,0,0,0.26593811658487,0,0,0,0,0.14297799365814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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1990 | |||
|TSSclassifier=S | |||
|UniProt=Q8WWK9 | |||
|association_with_transcript=63bp_to_ENST00000378037_5end | |||
|description=CAGE_peak_3_at_CKAP2_5end | |||
|id=chr13:53029665..53029676,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.20e-15!172;CL:0000566!2.20e-15!172;CL:0000988!7.84e-14!182;CL:0002032!1.12e-12!165;CL:0000837!1.12e-12!165;CL:0000763!4.44e-09!112;CL:0000049!4.44e-09!112;CL:0000738!2.54e-08!140;CL:0000012!5.39e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000784;6.24e-09;3!CL:0000623;2.50e-08;3!CL:0000226;2.17e-07;3!CL:0000842;2.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.52e-24,168;CL:0000988,5.29e-22,177;CL:0002032,3.70e-18,161;CL:0000837,3.70e-18,161;CL:0000738,4.62e-14,136;CL:0000134,1.09e-11,354;CL:0002320,3.66e-11,361;CL:0000763,1.46e-10,108;CL:0000049,1.46e-10,108;CL:0000219,6.82e-10,386;CL:0000034,4.48e-09,441;CL:0000784,5.40e-09,3;CL:0002087,9.34e-09,115;CL:0000623,1.44e-08,3;CL:0000825,1.44e-08,3;CL:0000838,3.38e-08,52;CL:0002031,3.56e-08,120;CL:0000048,4.09e-08,427;CL:0000542,5.70e-08,53;CL:0000051,5.70e-08,53;CL:0000723,8.58e-08,433;CL:0000226,1.55e-07,3;CL:0000842,1.55e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!7.57e-14!51;DOID:0060083!7.57e-14!51;DOID:162!1.36e-11!235;DOID:14566!1.58e-11!239;DOID:1240!1.85e-11!39;DOID:8692!1.03e-10!31;DOID:0050686!2.00e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.37e-15;31!DOID:1240;4.81e-11;39!DOID:2531;5.79e-08;51!DOID:0060083;5.79e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.85e-16,31;DOID:1240,2.96e-15,39;DOID:2531,1.49e-13,51;DOID:0060083,1.49e-13,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.06e-11,371 | |||
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| |||
|short_description=p3@CKAP2 | |||
}} |
Revision as of 02:37, 11 September 2013
Short description: | p3@CKAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CKAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_ENST00000378037_5end |
EntrezGene: | CKAP2 |
HGNC: | 1990 |
UniProt: | Q8WWK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.52e-24 | 168 |
hematopoietic cell | 5.29e-22 | 177 |
hematopoietic oligopotent progenitor cell | 3.70e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.70e-18 | 161 |
leukocyte | 4.62e-14 | 136 |
mesenchymal cell | 1.09e-11 | 354 |
connective tissue cell | 3.66e-11 | 361 |
myeloid cell | 1.46e-10 | 108 |
common myeloid progenitor | 1.46e-10 | 108 |
motile cell | 6.82e-10 | 386 |
stem cell | 4.48e-09 | 441 |
plasmacytoid dendritic cell | 5.40e-09 | 3 |
nongranular leukocyte | 9.34e-09 | 115 |
natural killer cell | 1.44e-08 | 3 |
pro-NK cell | 1.44e-08 | 3 |
lymphoid lineage restricted progenitor cell | 3.38e-08 | 52 |
hematopoietic lineage restricted progenitor cell | 3.56e-08 | 120 |
multi fate stem cell | 4.09e-08 | 427 |
lymphocyte | 5.70e-08 | 53 |
common lymphoid progenitor | 5.70e-08 | 53 |
somatic stem cell | 8.58e-08 | 433 |
single nucleate cell | 1.55e-07 | 3 |
mononuclear cell | 1.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.06e-11 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.85e-16 | 31 |
leukemia | 2.96e-15 | 39 |
hematologic cancer | 1.49e-13 | 51 |
immune system cancer | 1.49e-13 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.