FFCP PHASE1:Hg19::chr14:104698068..104698078,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C24|description=CAGE_peak_at_chr14:104698068..104698078,+|id=chr14:104698068..104698078,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;2.45e-13;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;2.47e-10;3!UBERON:0010227;3.96e-08;1|ontology_enrichment_disease=DOID:3095!3.21e-07!22;DOID:2994!3.21e-07!22|ontology_enrichment_disease_v019=DOID:171;2.05e-11;10!DOID:169;3.36e-11;6!DOID:5409;6.70e-08;4!DOID:3095;8.14e-08;22!DOID:2994;8.14e-08;22|ontology_enrichment_disease_v019_2=DOID:171,2.03e-11,10;DOID:169,4.29e-11,6;DOID:5409,6.04e-08,4;DOID:3095,8.15e-08,22;DOID:2994,8.15e-08,22|ontology_enrichment_uberon=UBERON:0007023!1.98e-22!115;UBERON:0001049!7.61e-19!57;UBERON:0005068!7.61e-19!57;UBERON:0006241!7.61e-19!57;UBERON:0007135!7.61e-19!57;UBERON:0002616!8.13e-18!59;UBERON:0000073!2.37e-16!94;UBERON:0001016!2.37e-16!94;UBERON:0000955!2.81e-16!69;UBERON:0006238!2.81e-16!69;UBERON:0002346!1.92e-15!90;UBERON:0002780!6.43e-15!41;UBERON:0001890!6.43e-15!41;UBERON:0006240!6.43e-15!41;UBERON:0003080!2.08e-14!42;UBERON:0003075!2.71e-14!86;UBERON:0007284!2.71e-14!86;UBERON:0001017!2.98e-14!82;UBERON:0005743!3.00e-14!86;UBERON:0002020!3.92e-11!34;UBERON:0003528!3.92e-11!34;UBERON:0003056!5.50e-11!61;UBERON:0001893!9.87e-11!34;UBERON:0001869!2.79e-10!32;UBERON:0002619!4.40e-10!22;UBERON:0000924!4.59e-10!173;UBERON:0006601!4.59e-10!173;UBERON:0002791!4.95e-10!33;UBERON:0000153!2.76e-09!129;UBERON:0007811!2.76e-09!129;UBERON:0004121!3.27e-09!169;UBERON:0000033!7.20e-09!123;UBERON:0000956!1.65e-08!25;UBERON:0000203!1.65e-08!25;UBERON:0003296!4.54e-08!4;UBERON:0010133!4.54e-08!4;UBERON:0001950!5.72e-08!20|ontology_enrichment_uberon_v019=UBERON:0003296;9.97e-17;4!UBERON:0010133;9.97e-17;4!UBERON:0001905;9.95e-16;2!UBERON:0002757;9.95e-16;2!UBERON:0010134;9.95e-16;2!UBERON:0005408;9.95e-16;2!UBERON:0001899;9.95e-16;2!UBERON:0000013;2.45e-13;5!UBERON:0002410;2.45e-13;5!UBERON:0001894;8.87e-10;7!UBERON:0002784;2.69e-08;4!UBERON:0007029;3.96e-08;1!UBERON:0002079;3.96e-08;1!UBERON:0000010;1.28e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.41e-16,4;UBERON:0010133,1.41e-16,4;UBERON:0001905,9.98e-16,2;UBERON:0002757,9.98e-16,2;UBERON:0010134,9.98e-16,2;UBERON:0005408,9.98e-16,2;UBERON:0001899,9.98e-16,2;UBERON:0000013,3.29e-13,5;UBERON:0002410,3.29e-13,5;UBERON:0001894,1.08e-09,7;UBERON:0006222,1.08e-09,7;UBERON:0007029,2.69e-08,1;UBERON:0002784,2.69e-08,4;UBERON:0002079,2.89e-08,1;UBERON:0000010,1.50e-07,8;UBERON:0011216,2.32e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0.703347082052564,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,1.16641845353302,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0,0.762569244632931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,1.99052386215701,0,1.22206028986725,0,0,0,0.337005664903385,0,0,0,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.940568614814168,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,0,0.77380195455795,0.182248669974074,0,0.0788057072991982,0.367182116944987,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.517131825446202,1.19009341568421,0,0,0.106787412567695,2.20086027139532,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0,0.3755727921195,0,0.554645257684261,0.683060432355218,2.76697269872462,0,0.454947352624943,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,7.76338642056109,0.943595651135378,2.07498312564826,1.86705782949428,0,0.743614585554013,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,1.27857558193737,0,0.781514011233092,0,0,0,0.0675375846183947,0.781078098613847,0,0.317079050969534,0.546974809018219,0,0.496211178389294,0,0,20.3566697633749,49.0974234439483,0.606965604236632,1.13831095675649,0,0,0,0.611727596791485,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,1.1436247068265,3.95034029331817,0,1.04314963381548,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0,0,0,3.4794432940146,1.45713297917742,0,0,0,0,1.31928620094515,2.56636834063345,0.308696632431779,1.31135736302374,0,0.490296643507811,0,0,0.297046400327086,0,0,0.187967835959707,1.09578409555081,0,0,0,0,0,0,0,0.631086248772738,0,0,2.1161073620616,0,0,0,0,0.437062287854782,2.15387451719443,0.203977659483963,0,0.0918948995348449,0.250707539292375,0,1.33982065078089,0,0.103432995861895,0,0.476128862927481,0,0.124149428591716,0,0,0.404234377916439,0,0,0.134704106029175,0.0717222053926763,1.33064142618405,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0|short_description=p@chr14:104698068..104698078,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr14:104698068..104698078,+ | |||
|id=chr14:104698068..104698078,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.45e-13;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.47e-10;3!UBERON:0010227;3.96e-08;1 | |||
|ontology_enrichment_disease=DOID:3095!3.21e-07!22;DOID:2994!3.21e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;2.05e-11;10!DOID:169;3.36e-11;6!DOID:5409;6.70e-08;4!DOID:3095;8.14e-08;22!DOID:2994;8.14e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.03e-11,10;DOID:169,4.29e-11,6;DOID:5409,6.04e-08,4;DOID:3095,8.15e-08,22;DOID:2994,8.15e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-22!115;UBERON:0001049!7.61e-19!57;UBERON:0005068!7.61e-19!57;UBERON:0006241!7.61e-19!57;UBERON:0007135!7.61e-19!57;UBERON:0002616!8.13e-18!59;UBERON:0000073!2.37e-16!94;UBERON:0001016!2.37e-16!94;UBERON:0000955!2.81e-16!69;UBERON:0006238!2.81e-16!69;UBERON:0002346!1.92e-15!90;UBERON:0002780!6.43e-15!41;UBERON:0001890!6.43e-15!41;UBERON:0006240!6.43e-15!41;UBERON:0003080!2.08e-14!42;UBERON:0003075!2.71e-14!86;UBERON:0007284!2.71e-14!86;UBERON:0001017!2.98e-14!82;UBERON:0005743!3.00e-14!86;UBERON:0002020!3.92e-11!34;UBERON:0003528!3.92e-11!34;UBERON:0003056!5.50e-11!61;UBERON:0001893!9.87e-11!34;UBERON:0001869!2.79e-10!32;UBERON:0002619!4.40e-10!22;UBERON:0000924!4.59e-10!173;UBERON:0006601!4.59e-10!173;UBERON:0002791!4.95e-10!33;UBERON:0000153!2.76e-09!129;UBERON:0007811!2.76e-09!129;UBERON:0004121!3.27e-09!169;UBERON:0000033!7.20e-09!123;UBERON:0000956!1.65e-08!25;UBERON:0000203!1.65e-08!25;UBERON:0003296!4.54e-08!4;UBERON:0010133!4.54e-08!4;UBERON:0001950!5.72e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;9.97e-17;4!UBERON:0010133;9.97e-17;4!UBERON:0001905;9.95e-16;2!UBERON:0002757;9.95e-16;2!UBERON:0010134;9.95e-16;2!UBERON:0005408;9.95e-16;2!UBERON:0001899;9.95e-16;2!UBERON:0000013;2.45e-13;5!UBERON:0002410;2.45e-13;5!UBERON:0001894;8.87e-10;7!UBERON:0002784;2.69e-08;4!UBERON:0007029;3.96e-08;1!UBERON:0002079;3.96e-08;1!UBERON:0000010;1.28e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.41e-16,4;UBERON:0010133,1.41e-16,4;UBERON:0001905,9.98e-16,2;UBERON:0002757,9.98e-16,2;UBERON:0010134,9.98e-16,2;UBERON:0005408,9.98e-16,2;UBERON:0001899,9.98e-16,2;UBERON:0000013,3.29e-13,5;UBERON:0002410,3.29e-13,5;UBERON:0001894,1.08e-09,7;UBERON:0006222,1.08e-09,7;UBERON:0007029,2.69e-08,1;UBERON:0002784,2.69e-08,4;UBERON:0002079,2.89e-08,1;UBERON:0000010,1.50e-07,8;UBERON:0011216,2.32e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0.703347082052564,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,1.16641845353302,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0,0.762569244632931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,1.99052386215701,0,1.22206028986725,0,0,0,0.337005664903385,0,0,0,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.940568614814168,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,0,0.77380195455795,0.182248669974074,0,0.0788057072991982,0.367182116944987,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.517131825446202,1.19009341568421,0,0,0.106787412567695,2.20086027139532,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0,0.3755727921195,0,0.554645257684261,0.683060432355218,2.76697269872462,0,0.454947352624943,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,7.76338642056109,0.943595651135378,2.07498312564826,1.86705782949428,0,0.743614585554013,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,1.27857558193737,0,0.781514011233092,0,0,0,0.0675375846183947,0.781078098613847,0,0.317079050969534,0.546974809018219,0,0.496211178389294,0,0,20.3566697633749,49.0974234439483,0.606965604236632,1.13831095675649,0,0,0,0.611727596791485,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,1.1436247068265,3.95034029331817,0,1.04314963381548,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0,0,0,3.4794432940146,1.45713297917742,0,0,0,0,1.31928620094515,2.56636834063345,0.308696632431779,1.31135736302374,0,0.490296643507811,0,0,0.297046400327086,0,0,0.187967835959707,1.09578409555081,0,0,0,0,0,0,0,0.631086248772738,0,0,2.1161073620616,0,0,0,0,0.437062287854782,2.15387451719443,0.203977659483963,0,0.0918948995348449,0.250707539292375,0,1.33982065078089,0,0.103432995861895,0,0.476128862927481,0,0.124149428591716,0,0,0.404234377916439,0,0,0.134704106029175,0.0717222053926763,1.33064142618405,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |||
|short_description=p@chr14:104698068..104698078,+ | |||
}} |
Revision as of 03:27, 11 September 2013
Short description: | p@chr14:104698068..104698078, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:104698068..104698078, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.41e-16 | 4 |
neuroendocrine gland | 1.41e-16 | 4 |
pineal body | 9.98e-16 | 2 |
regional part of epithalamus | 9.98e-16 | 2 |
secretory circumventricular organ | 9.98e-16 | 2 |
circumventricular organ | 9.98e-16 | 2 |
epithalamus | 9.98e-16 | 2 |
sympathetic nervous system | 3.29e-13 | 5 |
autonomic nervous system | 3.29e-13 | 5 |
diencephalon | 1.08e-09 | 7 |
future diencephalon | 1.08e-09 | 7 |
surface | 2.69e-08 | 1 |
regional part of diencephalon | 2.69e-08 | 4 |
left cardiac atrium | 2.89e-08 | 1 |
peripheral nervous system | 1.50e-07 | 8 |
organ system subdivision | 2.32e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.03e-11 | 10 |
neuroendocrine tumor | 4.29e-11 | 6 |
lung small cell carcinoma | 6.04e-08 | 4 |
germ cell and embryonal cancer | 8.15e-08 | 22 |
germ cell cancer | 8.15e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.