FFCP PHASE1:Hg19::chr14:99738457..99738468,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C588|description=CAGE_peak_at_chr14:99738457..99738468,-|id=chr14:99738457..99738468,-|ontology_enrichment_celltype=CL:0000084!5.25e-21!25;CL:0000827!5.25e-21!25;CL:0000791!6.60e-20!18;CL:0000789!6.60e-20!18;CL:0002420!6.60e-20!18;CL:0002419!6.60e-20!18;CL:0000790!6.60e-20!18;CL:0000838!2.30e-13!52;CL:0000542!6.66e-13!53;CL:0000051!6.66e-13!53;CL:0000625!8.75e-13!11;CL:0000624!3.87e-08!6|ontology_enrichment_celltype_v019=CL:0000791;2.60e-36;18!CL:0000789;2.60e-36;18!CL:0002419;2.60e-36;18!CL:0000084;1.75e-34;25!CL:0000625;5.70e-25;11!CL:0000624;2.18e-15;6!CL:0000542;7.36e-10;53!CL:0000623;1.53e-08;3!CL:0000226;1.81e-08;3!CL:0000842;1.81e-08;3!CL:0000898;3.48e-08;3|ontology_enrichment_celltype_v019_2=CL:0000791,1.43e-36,18;CL:0000789,1.43e-36,18;CL:0002420,1.43e-36,18;CL:0002419,1.43e-36,18;CL:0000790,1.43e-36,18;CL:0000084,1.25e-34,25;CL:0000827,1.25e-34,25;CL:0000625,3.26e-25,11;CL:0000838,5.38e-19,52;CL:0000542,1.64e-18,53;CL:0000051,1.64e-18,53;CL:0000624,2.04e-15,6;CL:0000738,3.12e-10,136;CL:0002087,7.49e-10,115;CL:0000623,1.55e-08,3;CL:0000825,1.55e-08,3;CL:0000226,1.84e-08,3;CL:0000842,1.84e-08,3;CL:0000898,3.29e-08,3;CL:0000037,8.99e-07,168|ontology_enrichment_development_v019=CL:0000790;2.60e-36;18!CL:0000051;7.36e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;7.57e-08;10|ontology_enrichment_disease_v019_2=DOID:171,8.15e-08,10|ontology_enrichment_uberon=UBERON:0001869!3.61e-17!32;UBERON:0001893!7.64e-17!34;UBERON:0002791!4.25e-16!33;UBERON:0002020!2.94e-15!34;UBERON:0003528!2.94e-15!34;UBERON:0002780!6.91e-15!41;UBERON:0001890!6.91e-15!41;UBERON:0006240!6.91e-15!41;UBERON:0003080!2.68e-14!42;UBERON:0002619!3.16e-14!22;UBERON:0007023!6.86e-13!115;UBERON:0001950!9.79e-13!20;UBERON:0000956!8.84e-12!25;UBERON:0000203!8.84e-12!25;UBERON:0001049!2.13e-11!57;UBERON:0005068!2.13e-11!57;UBERON:0006241!2.13e-11!57;UBERON:0007135!2.13e-11!57;UBERON:0001017!2.83e-11!82;UBERON:0000073!3.47e-10!94;UBERON:0001016!3.47e-10!94;UBERON:0005743!3.65e-10!86;UBERON:0002616!6.45e-10!59;UBERON:0000955!1.92e-09!69;UBERON:0006238!1.92e-09!69;UBERON:0003056!1.64e-08!61;UBERON:0000153!2.70e-08!129;UBERON:0007811!2.70e-08!129;UBERON:0002346!3.27e-08!90;UBERON:0000924!2.76e-07!173;UBERON:0006601!2.76e-07!173;UBERON:0002420!5.92e-07!9;UBERON:0007245!5.92e-07!9;UBERON:0010009!5.92e-07!9;UBERON:0010011!5.92e-07!9;UBERON:0000454!5.92e-07!9|ontology_enrichment_uberon_v019=UBERON:0002346;1.54e-09;4!UBERON:0000923;1.54e-09;4!UBERON:0010316;1.54e-09;4!UBERON:0005291;1.54e-09;4!UBERON:0000369;2.65e-09;4!UBERON:0002435;2.65e-09;4!UBERON:0000204;2.65e-09;4!UBERON:0002420;1.64e-08;9!UBERON:0007245;1.64e-08;9!UBERON:0010009;1.64e-08;9!UBERON:0010011;1.64e-08;9!UBERON:0000454;1.64e-08;9!UBERON:0009663;4.67e-08;7!UBERON:0002050;1.27e-07;5!UBERON:0005423;1.27e-07;5!UBERON:0001869;1.30e-07;32!UBERON:0005383;2.56e-07;3!UBERON:0005382;2.56e-07;3!UBERON:0002791;7.27e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.99e-09,4;UBERON:0002435,1.99e-09,4;UBERON:0000204,1.99e-09,4;UBERON:0010082,1.99e-09,4;UBERON:0002420,1.39e-08,9;UBERON:0007245,1.39e-08,9;UBERON:0010009,1.39e-08,9;UBERON:0010011,1.39e-08,9;UBERON:0000454,1.39e-08,9;UBERON:0001869,2.83e-08,32;UBERON:0009663,3.73e-08,7;UBERON:0001893,1.22e-07,34;UBERON:0005383,2.03e-07,3;UBERON:0005382,2.03e-07,3;UBERON:0002791,5.02e-07,32;UBERON:0002780,5.36e-07,41;UBERON:0001890,5.36e-07,41;UBERON:0003080,5.36e-07,41;UBERON:0006240,5.36e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,2.68680578668049,1.08371286321253,0,0,0,0,0,0,2.76997704265939,1.80490002723128,2.60413044859022,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,1.12101712596307,0,18.6874281608141,11.0043013569766,8.42966145897988,1.17030546773475,4.23698946623668,5.6813736688168,3.89653456815823,2.00538822393312,3.82987679717288,3.1014745241707,2.16643091012012,1.92136979588513,1.8208308658383,2.79544437826249,1.93445012450094,0.869409257205157,9.19376691604775,14.9822863730239,8.36284190439814,2.37949619664889,3.44898444241729,3.4362744548263,5.06039384039006,3.50421955756506,1.30216690771284,2.85135613334512,2.55977702432214,2.68771883424279,6.24653632761729,2.8413270245282,3.28451198768419,8.46748321543876,9.09296665663925,12.0204255222723,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0.741568885568859,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.386521706326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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C588 | |||
|description=CAGE_peak_at_chr14:99738457..99738468,- | |||
|id=chr14:99738457..99738468,- | |||
|ontology_enrichment_celltype=CL:0000084!5.25e-21!25;CL:0000827!5.25e-21!25;CL:0000791!6.60e-20!18;CL:0000789!6.60e-20!18;CL:0002420!6.60e-20!18;CL:0002419!6.60e-20!18;CL:0000790!6.60e-20!18;CL:0000838!2.30e-13!52;CL:0000542!6.66e-13!53;CL:0000051!6.66e-13!53;CL:0000625!8.75e-13!11;CL:0000624!3.87e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.60e-36;18!CL:0000789;2.60e-36;18!CL:0002419;2.60e-36;18!CL:0000084;1.75e-34;25!CL:0000625;5.70e-25;11!CL:0000624;2.18e-15;6!CL:0000542;7.36e-10;53!CL:0000623;1.53e-08;3!CL:0000226;1.81e-08;3!CL:0000842;1.81e-08;3!CL:0000898;3.48e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.43e-36,18;CL:0000789,1.43e-36,18;CL:0002420,1.43e-36,18;CL:0002419,1.43e-36,18;CL:0000790,1.43e-36,18;CL:0000084,1.25e-34,25;CL:0000827,1.25e-34,25;CL:0000625,3.26e-25,11;CL:0000838,5.38e-19,52;CL:0000542,1.64e-18,53;CL:0000051,1.64e-18,53;CL:0000624,2.04e-15,6;CL:0000738,3.12e-10,136;CL:0002087,7.49e-10,115;CL:0000623,1.55e-08,3;CL:0000825,1.55e-08,3;CL:0000226,1.84e-08,3;CL:0000842,1.84e-08,3;CL:0000898,3.29e-08,3;CL:0000037,8.99e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;2.60e-36;18!CL:0000051;7.36e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;7.57e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.15e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001869!3.61e-17!32;UBERON:0001893!7.64e-17!34;UBERON:0002791!4.25e-16!33;UBERON:0002020!2.94e-15!34;UBERON:0003528!2.94e-15!34;UBERON:0002780!6.91e-15!41;UBERON:0001890!6.91e-15!41;UBERON:0006240!6.91e-15!41;UBERON:0003080!2.68e-14!42;UBERON:0002619!3.16e-14!22;UBERON:0007023!6.86e-13!115;UBERON:0001950!9.79e-13!20;UBERON:0000956!8.84e-12!25;UBERON:0000203!8.84e-12!25;UBERON:0001049!2.13e-11!57;UBERON:0005068!2.13e-11!57;UBERON:0006241!2.13e-11!57;UBERON:0007135!2.13e-11!57;UBERON:0001017!2.83e-11!82;UBERON:0000073!3.47e-10!94;UBERON:0001016!3.47e-10!94;UBERON:0005743!3.65e-10!86;UBERON:0002616!6.45e-10!59;UBERON:0000955!1.92e-09!69;UBERON:0006238!1.92e-09!69;UBERON:0003056!1.64e-08!61;UBERON:0000153!2.70e-08!129;UBERON:0007811!2.70e-08!129;UBERON:0002346!3.27e-08!90;UBERON:0000924!2.76e-07!173;UBERON:0006601!2.76e-07!173;UBERON:0002420!5.92e-07!9;UBERON:0007245!5.92e-07!9;UBERON:0010009!5.92e-07!9;UBERON:0010011!5.92e-07!9;UBERON:0000454!5.92e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.54e-09;4!UBERON:0000923;1.54e-09;4!UBERON:0010316;1.54e-09;4!UBERON:0005291;1.54e-09;4!UBERON:0000369;2.65e-09;4!UBERON:0002435;2.65e-09;4!UBERON:0000204;2.65e-09;4!UBERON:0002420;1.64e-08;9!UBERON:0007245;1.64e-08;9!UBERON:0010009;1.64e-08;9!UBERON:0010011;1.64e-08;9!UBERON:0000454;1.64e-08;9!UBERON:0009663;4.67e-08;7!UBERON:0002050;1.27e-07;5!UBERON:0005423;1.27e-07;5!UBERON:0001869;1.30e-07;32!UBERON:0005383;2.56e-07;3!UBERON:0005382;2.56e-07;3!UBERON:0002791;7.27e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.99e-09,4;UBERON:0002435,1.99e-09,4;UBERON:0000204,1.99e-09,4;UBERON:0010082,1.99e-09,4;UBERON:0002420,1.39e-08,9;UBERON:0007245,1.39e-08,9;UBERON:0010009,1.39e-08,9;UBERON:0010011,1.39e-08,9;UBERON:0000454,1.39e-08,9;UBERON:0001869,2.83e-08,32;UBERON:0009663,3.73e-08,7;UBERON:0001893,1.22e-07,34;UBERON:0005383,2.03e-07,3;UBERON:0005382,2.03e-07,3;UBERON:0002791,5.02e-07,32;UBERON:0002780,5.36e-07,41;UBERON:0001890,5.36e-07,41;UBERON:0003080,5.36e-07,41;UBERON:0006240,5.36e-07,41 | |||
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| |||
|short_description=p@chr14:99738457..99738468,- | |||
}} |
Revision as of 06:16, 11 September 2013
Short description: | p@chr14:99738457..99738468, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:99738457..99738468, - |
Coexpression cluster: | C588_CD4_neuroectodermal_thymus_CD8_neuroepithelioma_Hodgkin_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.43e-36 | 18 |
alpha-beta T cell | 1.43e-36 | 18 |
immature T cell | 1.43e-36 | 18 |
mature T cell | 1.43e-36 | 18 |
immature alpha-beta T cell | 1.43e-36 | 18 |
T cell | 1.25e-34 | 25 |
pro-T cell | 1.25e-34 | 25 |
CD8-positive, alpha-beta T cell | 3.26e-25 | 11 |
lymphoid lineage restricted progenitor cell | 5.38e-19 | 52 |
lymphocyte | 1.64e-18 | 53 |
common lymphoid progenitor | 1.64e-18 | 53 |
CD4-positive, alpha-beta T cell | 2.04e-15 | 6 |
leukocyte | 3.12e-10 | 136 |
nongranular leukocyte | 7.49e-10 | 115 |
natural killer cell | 1.55e-08 | 3 |
pro-NK cell | 1.55e-08 | 3 |
single nucleate cell | 1.84e-08 | 3 |
mononuclear cell | 1.84e-08 | 3 |
naive T cell | 3.29e-08 | 3 |
hematopoietic stem cell | 8.99e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.99e-09 | 4 |
striatum | 1.99e-09 | 4 |
ventral part of telencephalon | 1.99e-09 | 4 |
future corpus striatum | 1.99e-09 | 4 |
basal ganglion | 1.39e-08 | 9 |
nuclear complex of neuraxis | 1.39e-08 | 9 |
aggregate regional part of brain | 1.39e-08 | 9 |
collection of basal ganglia | 1.39e-08 | 9 |
cerebral subcortex | 1.39e-08 | 9 |
cerebral hemisphere | 2.83e-08 | 32 |
telencephalic nucleus | 3.73e-08 | 7 |
telencephalon | 1.22e-07 | 34 |
caudate-putamen | 2.03e-07 | 3 |
dorsal striatum | 2.03e-07 | 3 |
regional part of telencephalon | 5.02e-07 | 32 |
regional part of forebrain | 5.36e-07 | 41 |
forebrain | 5.36e-07 | 41 |
anterior neural tube | 5.36e-07 | 41 |
future forebrain | 5.36e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.15e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.