FFCP PHASE1:Hg19::chr15:74466124..74466168,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3671|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6133|TSSclassifier=S|UniProt=O14498|association_with_transcript=37bp_to_NM_005545,uc002axg.1_5end|coexpression_cluster_id=C1751|description=CAGE_peak_3_at_ISLR_5end|id=chr15:74466124..74466168,+|ontology_enrichment_celltype=CL:0000055!1.48e-25!180;CL:0000057!9.38e-20!75;CL:0000680!4.74e-12!57;CL:0000056!4.74e-12!57;CL:0000355!4.74e-12!57;CL:0000187!1.81e-11!54;CL:0000183!9.06e-11!59;CL:0002334!3.28e-09!12;CL:0000393!4.95e-09!60;CL:0000211!4.95e-09!60;CL:0002620!5.92e-09!23;CL:0000136!1.24e-08!15;CL:0000192!2.09e-08!42;CL:0000514!2.09e-08!42;CL:0000327!8.56e-07!14|ontology_enrichment_celltype_v019=CL:0002334;5.13e-10;12!CL:0002620;1.01e-08;23!CL:0000136;6.92e-08;13!CL:0000057;1.82e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,3.18e-19,76;CL:0000680,9.89e-11,58;CL:0000056,9.89e-11,58;CL:0000355,9.89e-11,58;CL:0000187,4.21e-10,55;CL:0002334,5.03e-10,12;CL:0000136,2.18e-09,15;CL:0002620,1.11e-08,23;CL:0000393,8.34e-08,61;CL:0000211,8.34e-08,61;CL:0000192,3.19e-07,43;CL:0000514,3.19e-07,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!6.70e-17!365;UBERON:0007023!4.08e-16!115;UBERON:0000914!2.75e-14!83;UBERON:0002329!2.75e-14!83;UBERON:0003077!2.75e-14!83;UBERON:0003059!2.75e-14!83;UBERON:0007282!2.75e-14!83;UBERON:0009618!2.75e-14!83;UBERON:0007285!2.75e-14!83;UBERON:0004290!4.13e-14!70;UBERON:0002385!6.63e-14!63;UBERON:0001015!6.63e-14!63;UBERON:0000383!6.63e-14!63;UBERON:0001134!3.63e-13!61;UBERON:0002036!3.63e-13!61;UBERON:0003082!3.63e-13!61;UBERON:0000486!5.56e-11!82;UBERON:0000481!1.08e-10!347;UBERON:0000468!1.77e-09!659;UBERON:0007100!6.96e-09!27;UBERON:0000479!9.43e-09!787;UBERON:0000477!2.52e-08!286;UBERON:0000948!3.17e-08!24;UBERON:0005498!3.17e-08!24;UBERON:0004140!3.17e-08!24;UBERON:0009881!3.17e-08!24;UBERON:0004141!3.17e-08!24;UBERON:0003084!3.17e-08!24;UBERON:0007005!3.17e-08!24;UBERON:0004139!3.17e-08!24;UBERON:0004291!3.17e-08!24;UBERON:0003102!3.97e-08!95;UBERON:0005256!4.02e-08!143;UBERON:0001013!6.13e-08!14;UBERON:0002199!1.79e-07!45;UBERON:0002416!1.79e-07!45;UBERON:0004872!2.00e-07!84;UBERON:0000119!5.12e-07!312|ontology_enrichment_uberon_v019=UBERON:0001013;1.54e-08;14!UBERON:0007100;1.87e-08;25!UBERON:0000948;9.90e-08;22!UBERON:0002384;7.63e-07;198|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.66e-14,114;UBERON:0002385,3.00e-12,64;UBERON:0001015,3.00e-12,64;UBERON:0000383,3.00e-12,64;UBERON:0003077,4.88e-12,72;UBERON:0007285,4.88e-12,72;UBERON:0002329,8.51e-12,71;UBERON:0003059,8.51e-12,71;UBERON:0007282,8.51e-12,71;UBERON:0004290,8.51e-12,71;UBERON:0009618,8.51e-12,71;UBERON:0007524,1.25e-11,73;UBERON:0001134,1.73e-11,62;UBERON:0002036,1.73e-11,62;UBERON:0003082,1.73e-11,62;UBERON:0000479,4.02e-11,773;UBERON:0000486,2.83e-09,83;UBERON:0007503,3.19e-09,78;UBERON:0007100,4.16e-09,27;UBERON:0001013,1.28e-08,14;UBERON:0000948,2.25e-08,24;UBERON:0005498,2.25e-08,24;UBERON:0004140,2.25e-08,24;UBERON:0009881,2.25e-08,24;UBERON:0004141,2.25e-08,24;UBERON:0003084,2.25e-08,24;UBERON:0007005,2.25e-08,24;UBERON:0004139,2.25e-08,24;UBERON:0004291,2.25e-08,24;UBERON:0002199,4.82e-08,46;UBERON:0002416,4.82e-08,46;UBERON:0005256,1.10e-07,122;UBERON:0004872,2.96e-07,83;UBERON:0003104,5.70e-07,160;UBERON:0009142,5.70e-07,160|phase1_expression=57.773724608037,24.4074597235721,57.3684424670603,39.0285863577209,36.2038486486103,69.7870819280295,2.53299878168311,22.7419154433659,27.1633053327832,2.45733936501509,0,0,0,16.2133922377661,18.5582530407633,0.672325146451775,0.602694528023977,0,0,10.0959267622966,6.73202281106035,2.5076377718247,0.572471974262113,0.684372125364421,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5710299470943,30.1815386866636,15.0877822975366,76.2636611531435,88.7368101825524,124.85769934423,45.3312989819127,102.679957633856,1.22895262313288,0.665188192387692,1.14185221401064,16.8308112014561,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,4.47274756525787,27.0989294962201,41.179255232911,216.274812044606,59.584288209324,11.2135520028461,8.5399196583764,2.4666754841716,15.5605517699883,0.67355336034844,1.79808093424805,40.7151480364865,23.62321290368,2.81185718200556,0,1.71141546463335,5.67904986096844,1.05691048779388,0.971237666208789,0.702254033511242,4.49139176760765,1.22834317311768,9.19599452464312,1.18800285728205,7.41800787835671,34.586131753645,17.965453545406,0.673344455816265,1.12606667884768,4.43302584774693,5.26773145057006,4.90380473278431,11.4180924769014,1.36118619792025,81.4428946027433,96.3143823571739,47.0488820574227,121.236802818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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6133 | |||
|TSSclassifier=S | |||
|UniProt=O14498 | |||
|association_with_transcript=37bp_to_NM_005545,uc002axg.1_5end | |||
|coexpression_cluster_id=C1751 | |||
|description=CAGE_peak_3_at_ISLR_5end | |||
|id=chr15:74466124..74466168,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.48e-25!180;CL:0000057!9.38e-20!75;CL:0000680!4.74e-12!57;CL:0000056!4.74e-12!57;CL:0000355!4.74e-12!57;CL:0000187!1.81e-11!54;CL:0000183!9.06e-11!59;CL:0002334!3.28e-09!12;CL:0000393!4.95e-09!60;CL:0000211!4.95e-09!60;CL:0002620!5.92e-09!23;CL:0000136!1.24e-08!15;CL:0000192!2.09e-08!42;CL:0000514!2.09e-08!42;CL:0000327!8.56e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.13e-10;12!CL:0002620;1.01e-08;23!CL:0000136;6.92e-08;13!CL:0000057;1.82e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.18e-19,76;CL:0000680,9.89e-11,58;CL:0000056,9.89e-11,58;CL:0000355,9.89e-11,58;CL:0000187,4.21e-10,55;CL:0002334,5.03e-10,12;CL:0000136,2.18e-09,15;CL:0002620,1.11e-08,23;CL:0000393,8.34e-08,61;CL:0000211,8.34e-08,61;CL:0000192,3.19e-07,43;CL:0000514,3.19e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.70e-17!365;UBERON:0007023!4.08e-16!115;UBERON:0000914!2.75e-14!83;UBERON:0002329!2.75e-14!83;UBERON:0003077!2.75e-14!83;UBERON:0003059!2.75e-14!83;UBERON:0007282!2.75e-14!83;UBERON:0009618!2.75e-14!83;UBERON:0007285!2.75e-14!83;UBERON:0004290!4.13e-14!70;UBERON:0002385!6.63e-14!63;UBERON:0001015!6.63e-14!63;UBERON:0000383!6.63e-14!63;UBERON:0001134!3.63e-13!61;UBERON:0002036!3.63e-13!61;UBERON:0003082!3.63e-13!61;UBERON:0000486!5.56e-11!82;UBERON:0000481!1.08e-10!347;UBERON:0000468!1.77e-09!659;UBERON:0007100!6.96e-09!27;UBERON:0000479!9.43e-09!787;UBERON:0000477!2.52e-08!286;UBERON:0000948!3.17e-08!24;UBERON:0005498!3.17e-08!24;UBERON:0004140!3.17e-08!24;UBERON:0009881!3.17e-08!24;UBERON:0004141!3.17e-08!24;UBERON:0003084!3.17e-08!24;UBERON:0007005!3.17e-08!24;UBERON:0004139!3.17e-08!24;UBERON:0004291!3.17e-08!24;UBERON:0003102!3.97e-08!95;UBERON:0005256!4.02e-08!143;UBERON:0001013!6.13e-08!14;UBERON:0002199!1.79e-07!45;UBERON:0002416!1.79e-07!45;UBERON:0004872!2.00e-07!84;UBERON:0000119!5.12e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.54e-08;14!UBERON:0007100;1.87e-08;25!UBERON:0000948;9.90e-08;22!UBERON:0002384;7.63e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.66e-14,114;UBERON:0002385,3.00e-12,64;UBERON:0001015,3.00e-12,64;UBERON:0000383,3.00e-12,64;UBERON:0003077,4.88e-12,72;UBERON:0007285,4.88e-12,72;UBERON:0002329,8.51e-12,71;UBERON:0003059,8.51e-12,71;UBERON:0007282,8.51e-12,71;UBERON:0004290,8.51e-12,71;UBERON:0009618,8.51e-12,71;UBERON:0007524,1.25e-11,73;UBERON:0001134,1.73e-11,62;UBERON:0002036,1.73e-11,62;UBERON:0003082,1.73e-11,62;UBERON:0000479,4.02e-11,773;UBERON:0000486,2.83e-09,83;UBERON:0007503,3.19e-09,78;UBERON:0007100,4.16e-09,27;UBERON:0001013,1.28e-08,14;UBERON:0000948,2.25e-08,24;UBERON:0005498,2.25e-08,24;UBERON:0004140,2.25e-08,24;UBERON:0009881,2.25e-08,24;UBERON:0004141,2.25e-08,24;UBERON:0003084,2.25e-08,24;UBERON:0007005,2.25e-08,24;UBERON:0004139,2.25e-08,24;UBERON:0004291,2.25e-08,24;UBERON:0002199,4.82e-08,46;UBERON:0002416,4.82e-08,46;UBERON:0005256,1.10e-07,122;UBERON:0004872,2.96e-07,83;UBERON:0003104,5.70e-07,160;UBERON:0009142,5.70e-07,160 | |||
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| |||
|short_description=p3@ISLR | |||
}} |
Revision as of 08:12, 11 September 2013
Short description: | p3@ISLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ISLR_5end |
Coexpression cluster: | C1751_Mesenchymal_Fibroblast_tenocyte_Smooth_Synoviocyte_Hair_Preadipocyte |
Association with transcript: | 37bp_to_NM_005545, uc002axg.1_5end |
EntrezGene: | ISLR |
HGNC: | 6133 |
UniProt: | O14498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.18e-19 | 76 |
muscle precursor cell | 9.89e-11 | 58 |
myoblast | 9.89e-11 | 58 |
multi-potent skeletal muscle stem cell | 9.89e-11 | 58 |
muscle cell | 4.21e-10 | 55 |
preadipocyte | 5.03e-10 | 12 |
fat cell | 2.18e-09 | 15 |
skin fibroblast | 1.11e-08 | 23 |
electrically responsive cell | 8.34e-08 | 61 |
electrically active cell | 8.34e-08 | 61 |
smooth muscle cell | 3.19e-07 | 43 |
smooth muscle myoblast | 3.19e-07 | 43 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.