FFCP PHASE1:Hg19::chr17:1366641..1366652,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C11|description=CAGE_peak_at_chr17:1366641..1366652,-|id=chr17:1366641..1366652,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;4.20e-147;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4468;8.10e-26;2|ontology_enrichment_disease_v019_2=DOID:4468,9.18e-26,2|ontology_enrichment_uberon=UBERON:0001049!9.39e-37!57;UBERON:0005068!9.39e-37!57;UBERON:0006241!9.39e-37!57;UBERON:0007135!9.39e-37!57;UBERON:0002616!2.37e-32!59;UBERON:0000955!5.87e-31!69;UBERON:0006238!5.87e-31!69;UBERON:0001017!3.16e-27!82;UBERON:0000073!1.46e-26!94;UBERON:0001016!1.46e-26!94;UBERON:0005743!1.21e-25!86;UBERON:0003075!4.92e-24!86;UBERON:0007284!4.92e-24!86;UBERON:0002020!1.24e-23!34;UBERON:0003528!1.24e-23!34;UBERON:0002346!1.17e-22!90;UBERON:0004733!1.18e-22!12;UBERON:0002028!1.18e-22!12;UBERON:0007277!1.18e-22!12;UBERON:0001869!1.71e-22!32;UBERON:0002619!4.05e-22!22;UBERON:0003076!4.49e-22!15;UBERON:0003057!4.49e-22!15;UBERON:0007023!5.22e-21!115;UBERON:0001893!5.58e-21!34;UBERON:0004732!8.96e-21!13;UBERON:0001950!1.02e-20!20;UBERON:0002780!2.84e-19!41;UBERON:0001890!2.84e-19!41;UBERON:0006240!2.84e-19!41;UBERON:0000956!3.25e-19!25;UBERON:0000203!3.25e-19!25;UBERON:0002791!9.00e-19!33;UBERON:0003080!9.99e-19!42;UBERON:0000033!3.88e-17!123;UBERON:0000153!5.23e-16!129;UBERON:0007811!5.23e-16!129;UBERON:0004121!7.58e-16!169;UBERON:0000924!2.73e-15!173;UBERON:0006601!2.73e-15!173;UBERON:0002298!4.50e-15!8;UBERON:0000200!1.77e-14!6;UBERON:0002680!4.73e-14!9;UBERON:0001895!4.73e-14!9;UBERON:0010092!4.73e-14!9;UBERON:0003056!1.01e-11!61;UBERON:0001896!4.24e-11!3;UBERON:0005290!4.24e-11!3;UBERON:0010096!4.24e-11!3;UBERON:0000988!5.97e-11!3;UBERON:0002771!9.92e-11!3;UBERON:0000025!1.88e-08!194;UBERON:0000064!4.72e-08!219;UBERON:0002148!1.25e-07!2;UBERON:0009662!1.25e-07!2;UBERON:0001871!5.38e-07!7;UBERON:0001872!6.44e-07!5|ontology_enrichment_uberon_v019=UBERON:0002037;2.92e-74;6!UBERON:0002680;6.09e-50;9!UBERON:0001895;6.09e-50;9!UBERON:0004733;9.17e-38;12!UBERON:0002028;9.17e-38;12!UBERON:0004732;5.97e-35;13!UBERON:0000073;7.87e-07;53!UBERON:0002616;7.87e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,1.52581736317083,2.43274371848694,2.06883333267483,0,0.32681539055697,0,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0,0,0,0.558644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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr17:1366641..1366652,- | |||
|id=chr17:1366641..1366652,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.20e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;8.10e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.18e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.39e-37!57;UBERON:0005068!9.39e-37!57;UBERON:0006241!9.39e-37!57;UBERON:0007135!9.39e-37!57;UBERON:0002616!2.37e-32!59;UBERON:0000955!5.87e-31!69;UBERON:0006238!5.87e-31!69;UBERON:0001017!3.16e-27!82;UBERON:0000073!1.46e-26!94;UBERON:0001016!1.46e-26!94;UBERON:0005743!1.21e-25!86;UBERON:0003075!4.92e-24!86;UBERON:0007284!4.92e-24!86;UBERON:0002020!1.24e-23!34;UBERON:0003528!1.24e-23!34;UBERON:0002346!1.17e-22!90;UBERON:0004733!1.18e-22!12;UBERON:0002028!1.18e-22!12;UBERON:0007277!1.18e-22!12;UBERON:0001869!1.71e-22!32;UBERON:0002619!4.05e-22!22;UBERON:0003076!4.49e-22!15;UBERON:0003057!4.49e-22!15;UBERON:0007023!5.22e-21!115;UBERON:0001893!5.58e-21!34;UBERON:0004732!8.96e-21!13;UBERON:0001950!1.02e-20!20;UBERON:0002780!2.84e-19!41;UBERON:0001890!2.84e-19!41;UBERON:0006240!2.84e-19!41;UBERON:0000956!3.25e-19!25;UBERON:0000203!3.25e-19!25;UBERON:0002791!9.00e-19!33;UBERON:0003080!9.99e-19!42;UBERON:0000033!3.88e-17!123;UBERON:0000153!5.23e-16!129;UBERON:0007811!5.23e-16!129;UBERON:0004121!7.58e-16!169;UBERON:0000924!2.73e-15!173;UBERON:0006601!2.73e-15!173;UBERON:0002298!4.50e-15!8;UBERON:0000200!1.77e-14!6;UBERON:0002680!4.73e-14!9;UBERON:0001895!4.73e-14!9;UBERON:0010092!4.73e-14!9;UBERON:0003056!1.01e-11!61;UBERON:0001896!4.24e-11!3;UBERON:0005290!4.24e-11!3;UBERON:0010096!4.24e-11!3;UBERON:0000988!5.97e-11!3;UBERON:0002771!9.92e-11!3;UBERON:0000025!1.88e-08!194;UBERON:0000064!4.72e-08!219;UBERON:0002148!1.25e-07!2;UBERON:0009662!1.25e-07!2;UBERON:0001871!5.38e-07!7;UBERON:0001872!6.44e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.92e-74;6!UBERON:0002680;6.09e-50;9!UBERON:0001895;6.09e-50;9!UBERON:0004733;9.17e-38;12!UBERON:0002028;9.17e-38;12!UBERON:0004732;5.97e-35;13!UBERON:0000073;7.87e-07;53!UBERON:0002616;7.87e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68 | |||
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|short_description=p@chr17:1366641..1366652,- | |||
}} |
Revision as of 12:17, 11 September 2013
Short description: | p@chr17:1366641..1366652, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:1366641..1366652, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.18e-26 | 2 |
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