FFCP PHASE1:Hg19::chr17:2076035..2076057,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:2076035..2076057,-|id=chr17:2076035..2076057,-|ontology_enrichment_celltype=CL:0000222!4.36e-19!119;CL:0000220!9.86e-14!246;CL:0002321!2.60e-13!248;CL:0000055!5.56e-13!180;CL:0000359!8.94e-12!32;CL:0000183!5.66e-10!59;CL:0000680!7.48e-10!57;CL:0000056!7.48e-10!57;CL:0000355!7.48e-10!57;CL:0002139!1.43e-09!24;CL:0000071!5.74e-09!18;CL:0002546!5.74e-09!18;CL:0000192!7.34e-09!42;CL:0000514!7.34e-09!42;CL:0000187!7.63e-09!54;CL:0000213!1.04e-08!57;CL:0000215!1.04e-08!57;CL:0002078!3.31e-08!44;CL:0000393!3.41e-07!60;CL:0000211!3.41e-07!60;CL:1000497!7.20e-07!18;CL:0002518!7.20e-07!18;CL:0000115!8.57e-07!35|ontology_enrichment_celltype_v019=CL:0000359;4.16e-12;32!CL:0002594;8.54e-12;4!CL:0002544;6.58e-11;6!CL:0002139;6.67e-11;24!CL:0000071;2.57e-10;18!CL:1000413;5.90e-10;9!CL:0000115;9.76e-09;36!CL:0000192;7.75e-08;43|ontology_enrichment_celltype_v019_2=CL:0000222,4.50e-15,121;CL:0000359,3.06e-13,32;CL:0002594,6.37e-12,4;CL:0002544,1.48e-11,6;CL:0002139,4.01e-11,24;CL:0000071,8.08e-11,18;CL:0002546,8.08e-11,18;CL:1000413,1.35e-10,9;CL:0000192,1.60e-10,43;CL:0000514,1.60e-10,43;CL:0002078,1.60e-09,45;CL:0000115,1.66e-09,36;CL:0000213,6.58e-09,58;CL:0000215,6.58e-09,58;CL:0002321,2.01e-08,250;CL:0000187,1.89e-07,55;CL:0000680,6.87e-07,58;CL:0000056,6.87e-07,58;CL:0000355,6.87e-07,58|ontology_enrichment_development_v019=CL:0002546;2.57e-10;18!CL:0000514;7.75e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000119!2.76e-19!312;UBERON:0000025!2.03e-18!194;UBERON:0001637!2.79e-18!42;UBERON:0003509!2.79e-18!42;UBERON:0004572!2.79e-18!42;UBERON:0000055!4.26e-18!69;UBERON:0000483!4.71e-18!309;UBERON:0001981!6.70e-18!60;UBERON:0007500!6.70e-18!60;UBERON:0004537!6.70e-18!60;UBERON:0006965!6.70e-18!60;UBERON:0004872!1.36e-17!84;UBERON:0002049!6.43e-17!79;UBERON:0007798!6.43e-17!79;UBERON:0000475!1.57e-16!365;UBERON:0003914!3.81e-16!118;UBERON:0004111!5.89e-15!241;UBERON:0001009!9.76e-13!113;UBERON:0004573!2.26e-12!33;UBERON:0004571!2.26e-12!33;UBERON:0004535!4.43e-12!110;UBERON:0000477!1.35e-11!286;UBERON:0004290!1.61e-09!70;UBERON:0002100!3.86e-09!216;UBERON:0001986!5.74e-09!18;UBERON:0004638!5.74e-09!18;UBERON:0004852!5.74e-09!18;UBERON:0001134!2.43e-08!61;UBERON:0002036!2.43e-08!61;UBERON:0003082!2.43e-08!61;UBERON:0000490!3.19e-08!138;UBERON:0000486!5.85e-08!82;UBERON:0002385!1.12e-07!63;UBERON:0001015!1.12e-07!63;UBERON:0000383!1.12e-07!63;UBERON:0000947!1.13e-07!21;UBERON:0010191!1.13e-07!21;UBERON:0000467!1.68e-07!625;UBERON:0000487!1.70e-07!22;UBERON:0000914!1.74e-07!83;UBERON:0002329!1.74e-07!83;UBERON:0003077!1.74e-07!83;UBERON:0003059!1.74e-07!83;UBERON:0007282!1.74e-07!83;UBERON:0009618!1.74e-07!83;UBERON:0007285!1.74e-07!83;UBERON:0003075!2.17e-07!86;UBERON:0007284!2.17e-07!86;UBERON:0000480!2.19e-07!626;UBERON:0005256!2.62e-07!143;UBERON:0000481!7.06e-07!347;UBERON:0000468!7.85e-07!659|ontology_enrichment_uberon_v019=UBERON:0001637;3.68e-15;42!UBERON:0003509;3.68e-15;42!UBERON:0004572;3.68e-15;42!UBERON:0003914;2.72e-12;74!UBERON:0001310;8.54e-12;4!UBERON:0004573;1.70e-11;33!UBERON:0004571;1.70e-11;33!UBERON:0007500;3.69e-11;56!UBERON:0001981;3.69e-11;56!UBERON:0004537;3.69e-11;56!UBERON:0000055;1.12e-10;65!UBERON:0004638;2.57e-10;18!UBERON:0001986;2.57e-10;18!UBERON:0004852;2.57e-10;18!UBERON:0000487;3.70e-10;22!UBERON:0003915;5.90e-10;9!UBERON:0004700;5.90e-10;9!UBERON:0001917;5.90e-10;9!UBERON:0006914;1.09e-08;25!UBERON:0002049;2.21e-08;75!UBERON:0007798;2.21e-08;75!UBERON:0000025;8.37e-08;93!UBERON:0000490;5.94e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.11e-20,42;UBERON:0003509,1.11e-20,42;UBERON:0004572,1.11e-20,42;UBERON:0007500,3.15e-18,59;UBERON:0001981,3.15e-18,59;UBERON:0004537,3.15e-18,59;UBERON:0006965,3.15e-18,59;UBERON:0000055,6.88e-18,68;UBERON:0004872,2.05e-16,83;UBERON:0002049,1.00e-14,78;UBERON:0007798,1.00e-14,78;UBERON:0003914,1.19e-13,117;UBERON:0004573,9.36e-13,33;UBERON:0004571,9.36e-13,33;UBERON:0001310,6.37e-12,4;UBERON:0004638,8.08e-11,18;UBERON:0001986,8.08e-11,18;UBERON:0004852,8.08e-11,18;UBERON:0000487,1.23e-10,22;UBERON:0000025,1.27e-10,192;UBERON:0003915,1.35e-10,9;UBERON:0004700,1.35e-10,9;UBERON:0001917,1.35e-10,9;UBERON:0004535,1.62e-10,109;UBERON:0001009,4.70e-10,112;UBERON:0006914,4.26e-09,25;UBERON:0004111,8.85e-08,240;UBERON:0007503,1.63e-07,78;UBERON:0000947,4.12e-07,21;UBERON:0010191,4.12e-07,21|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,1.26343974685366,0,2.7030733015166,0.697801167972428,0,0.527533956456907,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.204000691244253,0.313454721478088,0.572471974262113,1.09499540058307,0,0,0,0,0,0,0,0.919421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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:2076035..2076057,- | |||
|id=chr17:2076035..2076057,- | |||
|ontology_enrichment_celltype=CL:0000222!4.36e-19!119;CL:0000220!9.86e-14!246;CL:0002321!2.60e-13!248;CL:0000055!5.56e-13!180;CL:0000359!8.94e-12!32;CL:0000183!5.66e-10!59;CL:0000680!7.48e-10!57;CL:0000056!7.48e-10!57;CL:0000355!7.48e-10!57;CL:0002139!1.43e-09!24;CL:0000071!5.74e-09!18;CL:0002546!5.74e-09!18;CL:0000192!7.34e-09!42;CL:0000514!7.34e-09!42;CL:0000187!7.63e-09!54;CL:0000213!1.04e-08!57;CL:0000215!1.04e-08!57;CL:0002078!3.31e-08!44;CL:0000393!3.41e-07!60;CL:0000211!3.41e-07!60;CL:1000497!7.20e-07!18;CL:0002518!7.20e-07!18;CL:0000115!8.57e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.16e-12;32!CL:0002594;8.54e-12;4!CL:0002544;6.58e-11;6!CL:0002139;6.67e-11;24!CL:0000071;2.57e-10;18!CL:1000413;5.90e-10;9!CL:0000115;9.76e-09;36!CL:0000192;7.75e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.50e-15,121;CL:0000359,3.06e-13,32;CL:0002594,6.37e-12,4;CL:0002544,1.48e-11,6;CL:0002139,4.01e-11,24;CL:0000071,8.08e-11,18;CL:0002546,8.08e-11,18;CL:1000413,1.35e-10,9;CL:0000192,1.60e-10,43;CL:0000514,1.60e-10,43;CL:0002078,1.60e-09,45;CL:0000115,1.66e-09,36;CL:0000213,6.58e-09,58;CL:0000215,6.58e-09,58;CL:0002321,2.01e-08,250;CL:0000187,1.89e-07,55;CL:0000680,6.87e-07,58;CL:0000056,6.87e-07,58;CL:0000355,6.87e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.57e-10;18!CL:0000514;7.75e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.76e-19!312;UBERON:0000025!2.03e-18!194;UBERON:0001637!2.79e-18!42;UBERON:0003509!2.79e-18!42;UBERON:0004572!2.79e-18!42;UBERON:0000055!4.26e-18!69;UBERON:0000483!4.71e-18!309;UBERON:0001981!6.70e-18!60;UBERON:0007500!6.70e-18!60;UBERON:0004537!6.70e-18!60;UBERON:0006965!6.70e-18!60;UBERON:0004872!1.36e-17!84;UBERON:0002049!6.43e-17!79;UBERON:0007798!6.43e-17!79;UBERON:0000475!1.57e-16!365;UBERON:0003914!3.81e-16!118;UBERON:0004111!5.89e-15!241;UBERON:0001009!9.76e-13!113;UBERON:0004573!2.26e-12!33;UBERON:0004571!2.26e-12!33;UBERON:0004535!4.43e-12!110;UBERON:0000477!1.35e-11!286;UBERON:0004290!1.61e-09!70;UBERON:0002100!3.86e-09!216;UBERON:0001986!5.74e-09!18;UBERON:0004638!5.74e-09!18;UBERON:0004852!5.74e-09!18;UBERON:0001134!2.43e-08!61;UBERON:0002036!2.43e-08!61;UBERON:0003082!2.43e-08!61;UBERON:0000490!3.19e-08!138;UBERON:0000486!5.85e-08!82;UBERON:0002385!1.12e-07!63;UBERON:0001015!1.12e-07!63;UBERON:0000383!1.12e-07!63;UBERON:0000947!1.13e-07!21;UBERON:0010191!1.13e-07!21;UBERON:0000467!1.68e-07!625;UBERON:0000487!1.70e-07!22;UBERON:0000914!1.74e-07!83;UBERON:0002329!1.74e-07!83;UBERON:0003077!1.74e-07!83;UBERON:0003059!1.74e-07!83;UBERON:0007282!1.74e-07!83;UBERON:0009618!1.74e-07!83;UBERON:0007285!1.74e-07!83;UBERON:0003075!2.17e-07!86;UBERON:0007284!2.17e-07!86;UBERON:0000480!2.19e-07!626;UBERON:0005256!2.62e-07!143;UBERON:0000481!7.06e-07!347;UBERON:0000468!7.85e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.68e-15;42!UBERON:0003509;3.68e-15;42!UBERON:0004572;3.68e-15;42!UBERON:0003914;2.72e-12;74!UBERON:0001310;8.54e-12;4!UBERON:0004573;1.70e-11;33!UBERON:0004571;1.70e-11;33!UBERON:0007500;3.69e-11;56!UBERON:0001981;3.69e-11;56!UBERON:0004537;3.69e-11;56!UBERON:0000055;1.12e-10;65!UBERON:0004638;2.57e-10;18!UBERON:0001986;2.57e-10;18!UBERON:0004852;2.57e-10;18!UBERON:0000487;3.70e-10;22!UBERON:0003915;5.90e-10;9!UBERON:0004700;5.90e-10;9!UBERON:0001917;5.90e-10;9!UBERON:0006914;1.09e-08;25!UBERON:0002049;2.21e-08;75!UBERON:0007798;2.21e-08;75!UBERON:0000025;8.37e-08;93!UBERON:0000490;5.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.11e-20,42;UBERON:0003509,1.11e-20,42;UBERON:0004572,1.11e-20,42;UBERON:0007500,3.15e-18,59;UBERON:0001981,3.15e-18,59;UBERON:0004537,3.15e-18,59;UBERON:0006965,3.15e-18,59;UBERON:0000055,6.88e-18,68;UBERON:0004872,2.05e-16,83;UBERON:0002049,1.00e-14,78;UBERON:0007798,1.00e-14,78;UBERON:0003914,1.19e-13,117;UBERON:0004573,9.36e-13,33;UBERON:0004571,9.36e-13,33;UBERON:0001310,6.37e-12,4;UBERON:0004638,8.08e-11,18;UBERON:0001986,8.08e-11,18;UBERON:0004852,8.08e-11,18;UBERON:0000487,1.23e-10,22;UBERON:0000025,1.27e-10,192;UBERON:0003915,1.35e-10,9;UBERON:0004700,1.35e-10,9;UBERON:0001917,1.35e-10,9;UBERON:0004535,1.62e-10,109;UBERON:0001009,4.70e-10,112;UBERON:0006914,4.26e-09,25;UBERON:0004111,8.85e-08,240;UBERON:0007503,1.63e-07,78;UBERON:0000947,4.12e-07,21;UBERON:0010191,4.12e-07,21 | |||
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| |||
|short_description=p@chr17:2076035..2076057,- | |||
}} |
Revision as of 12:35, 11 September 2013
Short description: | p@chr17:2076035..2076057, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:2076035..2076057, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.50e-15 | 121 |
vascular associated smooth muscle cell | 3.06e-13 | 32 |
smooth muscle cell of the umbilical artery | 6.37e-12 | 4 |
aortic endothelial cell | 1.48e-11 | 6 |
endothelial cell of vascular tree | 4.01e-11 | 24 |
blood vessel endothelial cell | 8.08e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.08e-11 | 18 |
endothelial cell of artery | 1.35e-10 | 9 |
smooth muscle cell | 1.60e-10 | 43 |
smooth muscle myoblast | 1.60e-10 | 43 |
meso-epithelial cell | 1.60e-09 | 45 |
endothelial cell | 1.66e-09 | 36 |
lining cell | 6.58e-09 | 58 |
barrier cell | 6.58e-09 | 58 |
embryonic cell | 2.01e-08 | 250 |
muscle cell | 1.89e-07 | 55 |
muscle precursor cell | 6.87e-07 | 58 |
myoblast | 6.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.87e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
artery | 1.11e-20 | 42 |
arterial blood vessel | 1.11e-20 | 42 |
arterial system | 1.11e-20 | 42 |
epithelial tube open at both ends | 3.15e-18 | 59 |
blood vessel | 3.15e-18 | 59 |
blood vasculature | 3.15e-18 | 59 |
vascular cord | 3.15e-18 | 59 |
vessel | 6.88e-18 | 68 |
splanchnic layer of lateral plate mesoderm | 2.05e-16 | 83 |
vasculature | 1.00e-14 | 78 |
vascular system | 1.00e-14 | 78 |
epithelial tube | 1.19e-13 | 117 |
systemic artery | 9.36e-13 | 33 |
systemic arterial system | 9.36e-13 | 33 |
umbilical artery | 6.37e-12 | 4 |
blood vessel endothelium | 8.08e-11 | 18 |
endothelium | 8.08e-11 | 18 |
cardiovascular system endothelium | 8.08e-11 | 18 |
simple squamous epithelium | 1.23e-10 | 22 |
tube | 1.27e-10 | 192 |
endothelial tube | 1.35e-10 | 9 |
arterial system endothelium | 1.35e-10 | 9 |
endothelium of artery | 1.35e-10 | 9 |
cardiovascular system | 1.62e-10 | 109 |
circulatory system | 4.70e-10 | 112 |
squamous epithelium | 4.26e-09 | 25 |
anatomical conduit | 8.85e-08 | 240 |
epithelial vesicle | 1.63e-07 | 78 |
aorta | 4.12e-07 | 21 |
aortic system | 4.12e-07 | 21 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.